| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84626022
Identifier: 84626022
GI number: 84626022
Start: 4929844
End: 4931589
Strand: Reverse
Name: 84626022
Synonym: XOO_4365
Alternate gene names: NA
Gene position: 4931589-4929844 (Counterclockwise)
Preceding gene: 84626023
Following gene: 84626021
Centisome position: 99.83
GC content: 61.86
Gene sequence:
>1746_bases ATGCCAATCGGCGCACCTTCCTGCGCGTGGATACCGGCGATTACAACGGGTTTTCGGCGTATCTGTCTGGCATCAACGCC GAAGCCGACATGTGGGCGCGGCCGGAATCGCCGACCACCACGCGGCAGTTCAACGCCAAGGGTATGTACCAAGTTCGACG GCGGCAAGCTGACCACATTCGCCGACACCTCGCGCACCTCGCAGGCGGACTATCTGTCCAAGAGCGGCATGGCGCGTGGC CTGGGTTGGGACTGGAATCTGTACGCGCCGGACTGGAACCGCGCATTGGCGGCTGCATATTGCGCGCCAGCCACGCGTAA TGCGGCGCGCTGCGGTTTTAGCGGCGGGGTCGATAACATCGAAGATGCGTATTACCAGAGCCGCGCGTTGCGCGACGACG ACCTGTTCTATATGGCCGGCGACTTCCAGCCTAACGATGCGATCAGCCTGCACACGCAGGTCTATCACCATGAAAACAAG GGCCAGGGCCACTGGTGGTCGCCGGGACAGGCGTCCAATTCGGGCACGCCACAGGCATTGCCGATTTCCATCCGCAGCAC CAATGACTGGATCAACCGTACCGGCGGCATCGCCTCGCTCGGTTGGGACCTTGGCCCGCATCATCTGGAAGCCGGCCTGT GGTACGAGCGCAATCACCATGATCTGGAACGCAACTTCTACTGGATTACCGGCCCGGTCAGCGACGACACGTTCCTGCAG AACCCCAACCGTCGCTTGTTTTCGCAGAACGACGTCATCACCACGCGCCAGTTCTATGTGCAGGGCAACTTCAAGTTCCT CGATGAGCGCCTGAGCCTGGACGTGGGCATCAAGAGCCCGAGCACCGAAATGACCGCGCGCAAAACGCCGGGCGTGGCAG TGAAAGCGCCGGTGGCAACCGGCTTGCTCACGGCCAGCGAATCAGTGTTGCCGCAGATCGGCTTGGGTTATCGCCTCGCC GAAGGCCAGGAAGTGTTCGTCTCGTATGCGGAAAATATCGCCGCATTCCAGGGTGCCGGCGCCGGTGGTCCGTTGCTGGT GACCGAGGCATCGTTCGATGCCAGCGTCGGCGCATTGGAGCCGGAAAAATCGCGCACGCTGGAAGCAGGCTATCGCTTTG TCCGCGACCGCTTCGAAGCCTCGCTGGTCGGTTACGACGTCACCTTCGATAACCGCCTGCTCTCGCTCAACCCGTGTGCC AGCATCCAGCAGGGCACCACGCCGGCGTGCACCACGCGTTTCTTCAACGTCGGCTCGGTGAGCAGCCGCGGCGGCGAACT GACGGTGATCTGGAAGCCGACCAGCGACCTGCAGTGGTACAACTCGGCGTCGATCAACCGTTCGACCTATGACGACAACT ACGTGCAGAACGGCGTGACCATCCCTACCGCCGGCAAGTACACGGTGGATACGCCCAAGCGCATGTTTGCCAGCGAAATC GCCTTCAACTACGAAAACTGGAACGTCAACCTGCGCGGCAAGTACACCGGCCAGCGCTATTACACCTACACCAACGATCA GGGCGTGGGCGGCTACACCTCGTTCGATGCCGGCGCCGGGTATGCATTCGGCCAGGTCGGCGTGCTGCAGGCGCTCAAGC TCTCGCTTAACGTCACCAACCTCACCGACAAGCGTTACGCCTCCAACCTCACCGCGTTCGCCAACACCGACCCGAACGGG CGTCAGCTGGCGTTCCATGCCAGTGCACCGCGTCAGGTGTTTTTGACGCTGGATGCGAAGTTCTGA
Upstream 100 bases:
>100_bases GGTACTGCCTCCACCAGCAACCTGGGTGGCACCATCCAGTATTACTCGACCGATCCGTCCAGCGTGTTCGGCGGGGAGGT GTCGCAGACGGTGGGCTCCG
Downstream 100 bases:
>100_bases GGACGGGAATCGGGAATCGTAAGAGCCGTTCTTGCGGTTGCTGACCGATTTCCGGTTTCGATCGACGTAGACAGGTTTAA GCTGGCTAACCAAACGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Domain Protein; Nb-Dependent Receptor; NB-Dependent Receptor Protein; NB Dependent Receptor Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug; Outer Membrane Heme Receptor
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MPIGAPSCAWIPAITTGFRRICLASTPKPTCGRGRNRRPPRGSSTPRVCTKFDGGKLTTFADTSRTSQADYLSKSGMARG LGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNIEDAYYQSRALRDDDLFYMAGDFQPNDAISLHTQVYHHENK GQGHWWSPGQASNSGTPQALPISIRSTNDWINRTGGIASLGWDLGPHHLEAGLWYERNHHDLERNFYWITGPVSDDTFLQ NPNRRLFSQNDVITTRQFYVQGNFKFLDERLSLDVGIKSPSTEMTARKTPGVAVKAPVATGLLTASESVLPQIGLGYRLA EGQEVFVSYAENIAAFQGAGAGGPLLVTEASFDASVGALEPEKSRTLEAGYRFVRDRFEASLVGYDVTFDNRLLSLNPCA SIQQGTTPACTTRFFNVGSVSSRGGELTVIWKPTSDLQWYNSASINRSTYDDNYVQNGVTIPTAGKYTVDTPKRMFASEI AFNYENWNVNLRGKYTGQRYYTYTNDQGVGGYTSFDAGAGYAFGQVGVLQALKLSLNVTNLTDKRYASNLTAFANTDPNG RQLAFHASAPRQVFLTLDAKF
Sequences:
>Translated_581_residues MPIGAPSCAWIPAITTGFRRICLASTPKPTCGRGRNRRPPRGSSTPRVCTKFDGGKLTTFADTSRTSQADYLSKSGMARG LGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNIEDAYYQSRALRDDDLFYMAGDFQPNDAISLHTQVYHHENK GQGHWWSPGQASNSGTPQALPISIRSTNDWINRTGGIASLGWDLGPHHLEAGLWYERNHHDLERNFYWITGPVSDDTFLQ NPNRRLFSQNDVITTRQFYVQGNFKFLDERLSLDVGIKSPSTEMTARKTPGVAVKAPVATGLLTASESVLPQIGLGYRLA EGQEVFVSYAENIAAFQGAGAGGPLLVTEASFDASVGALEPEKSRTLEAGYRFVRDRFEASLVGYDVTFDNRLLSLNPCA SIQQGTTPACTTRFFNVGSVSSRGGELTVIWKPTSDLQWYNSASINRSTYDDNYVQNGVTIPTAGKYTVDTPKRMFASEI AFNYENWNVNLRGKYTGQRYYTYTNDQGVGGYTSFDAGAGYAFGQVGVLQALKLSLNVTNLTDKRYASNLTAFANTDPNG RQLAFHASAPRQVFLTLDAKF >Mature_580_residues PIGAPSCAWIPAITTGFRRICLASTPKPTCGRGRNRRPPRGSSTPRVCTKFDGGKLTTFADTSRTSQADYLSKSGMARGL GWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNIEDAYYQSRALRDDDLFYMAGDFQPNDAISLHTQVYHHENKG QGHWWSPGQASNSGTPQALPISIRSTNDWINRTGGIASLGWDLGPHHLEAGLWYERNHHDLERNFYWITGPVSDDTFLQN PNRRLFSQNDVITTRQFYVQGNFKFLDERLSLDVGIKSPSTEMTARKTPGVAVKAPVATGLLTASESVLPQIGLGYRLAE GQEVFVSYAENIAAFQGAGAGGPLLVTEASFDASVGALEPEKSRTLEAGYRFVRDRFEASLVGYDVTFDNRLLSLNPCAS IQQGTTPACTTRFFNVGSVSSRGGELTVIWKPTSDLQWYNSASINRSTYDDNYVQNGVTIPTAGKYTVDTPKRMFASEIA FNYENWNVNLRGKYTGQRYYTYTNDQGVGGYTSFDAGAGYAFGQVGVLQALKLSLNVTNLTDKRYASNLTAFANTDPNGR QLAFHASAPRQVFLTLDAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63866; Mature: 63734
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIGAPSCAWIPAITTGFRRICLASTPKPTCGRGRNRRPPRGSSTPRVCTKFDGGKLTTF CCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEE ADTSRTSQADYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNI ECCCCCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCH EDAYYQSRALRDDDLFYMAGDFQPNDAISLHTQVYHHENKGQGHWWSPGQASNSGTPQAL HHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE PISIRSTNDWINRTGGIASLGWDLGPHHLEAGLWYERNHHDLERNFYWITGPVSDDTFLQ EEEEECCCCHHHCCCCEEEECCCCCHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCHHC NPNRRLFSQNDVITTRQFYVQGNFKFLDERLSLDVGIKSPSTEMTARKTPGVAVKAPVAT CCCCHHCCCCCEEEEEEEEEECCHHEEECCEEEEEECCCCCCCCEECCCCCEEEECCHHH GLLTASESVLPQIGLGYRLAEGQEVFVSYAENIAAFQGAGAGGPLLVTEASFDASVGALE HEECCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC PEKSRTLEAGYRFVRDRFEASLVGYDVTFDNRLLSLNPCASIQQGTTPACTTRFFNVGSV CHHHHHHHHHHHHHHHHHHHEEEEEEEEECCEEEEECCCCCCCCCCCCHHHHEEEECCCC SSRGGELTVIWKPTSDLQWYNSASINRSTYDDNYVQNGVTIPTAGKYTVDTPKRMFASEI CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCEECCCCCCEECCCHHHHHHHHH AFNYENWNVNLRGKYTGQRYYTYTNDQGVGGYTSFDAGAGYAFGQVGVLQALKLSLNVTN EEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEC LTDKRYASNLTAFANTDPNGRQLAFHASAPRQVFLTLDAKF CCCHHHHCCEEEEECCCCCCCEEEEECCCCEEEEEEEECCC >Mature Secondary Structure PIGAPSCAWIPAITTGFRRICLASTPKPTCGRGRNRRPPRGSSTPRVCTKFDGGKLTTF CCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEE ADTSRTSQADYLSKSGMARGLGWDWNLYAPDWNRALAAAYCAPATRNAARCGFSGGVDNI ECCCCCCHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCH EDAYYQSRALRDDDLFYMAGDFQPNDAISLHTQVYHHENKGQGHWWSPGQASNSGTPQAL HHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEE PISIRSTNDWINRTGGIASLGWDLGPHHLEAGLWYERNHHDLERNFYWITGPVSDDTFLQ EEEEECCCCHHHCCCCEEEECCCCCHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCHHC NPNRRLFSQNDVITTRQFYVQGNFKFLDERLSLDVGIKSPSTEMTARKTPGVAVKAPVAT CCCCHHCCCCCEEEEEEEEEECCHHEEECCEEEEEECCCCCCCCEECCCCCEEEECCHHH GLLTASESVLPQIGLGYRLAEGQEVFVSYAENIAAFQGAGAGGPLLVTEASFDASVGALE HEECCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCC PEKSRTLEAGYRFVRDRFEASLVGYDVTFDNRLLSLNPCASIQQGTTPACTTRFFNVGSV CHHHHHHHHHHHHHHHHHHHEEEEEEEEECCEEEEECCCCCCCCCCCCHHHHEEEECCCC SSRGGELTVIWKPTSDLQWYNSASINRSTYDDNYVQNGVTIPTAGKYTVDTPKRMFASEI CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCEECCCCCCEECCCHHHHHHHHH AFNYENWNVNLRGKYTGQRYYTYTNDQGVGGYTSFDAGAGYAFGQVGVLQALKLSLNVTN EEEECCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEC LTDKRYASNLTAFANTDPNGRQLAFHASAPRQVFLTLDAKF CCCHHHHCCEEEEECCCCCCCEEEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA