| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625987
Identifier: 84625987
GI number: 84625987
Start: 4893008
End: 4894171
Strand: Reverse
Name: 84625987
Synonym: XOO_4330
Alternate gene names: NA
Gene position: 4894171-4893008 (Counterclockwise)
Preceding gene: 84625988
Following gene: 84625984
Centisome position: 99.07
GC content: 70.96
Gene sequence:
>1164_bases ATGATGTTGCCTGCCGCTGCGCTGCTGGCCTTGCGCGGGCAGTGGCAGCGCGCACGCGGGCAGTGGCTGATCGGCGAGGG CGCACCGCAGGCGATCGGATTGCGGGCGCCGACCCAGGCACAGGCCATCGCGCGGTTCGATGCCTTCGGTGCGTGGTTGC AGGAGTGGAGCCGCACAGGCCTGCCGGGGCGGGTGGAGTATCGCGCGGTGAGCTGGACGCAGCTGGGGCCGCAGCGCCTG CCGCAGACCTGGGTGCTGGACGATGCGGGCCAGGCCGCCGGCGCGCTTGGCGAGGGCGAGCGCTGGGCGCGTGCCCGCCA ACGCAGCGCTGCCTTGCAGGCGCGCTGGCCGCAGGCGGTCGCGCTGGCGGCGCGGCTACGCCGTCAATTCGATCTGCTGG CCGACTGGCCGGAGGTCGAGTTCGCACGCTTGGTGGCGGTGGTGGAGTGGCTGCACCAGCATCGCGACAGTGGACTGTTC CTGCGCCAGCTTCCCATCGCCGGCATCGACAGCAAATGGATCGAACCGCATCGCGGCGTCATCGCCGACTGGCTTGCCGG CCTGCGCGGCATCGCCGAGCCGCGCAGCTTTGCCAGCCTGTCCGGCCTGCGCAACGCGCCGGATCGGGTGCGCTTGCGAT TGCTCGACCCGGCCCTGCGCCACCACATCGGCGGCCTGGAGGACATCACCGCACCGATCGCGCAGATCGCCGCGCTGCGT CTGCCTGTGCGCCGCGTGCTGATCGTGGAAAACCGCGAAACCGGTCTGGCCTGCGAATCGCTGCCGGGCACGCTGGTGCT GATGGCGCGCGGGTACGCCGTCGAATACGTGAGCAATATCGGGTGGCTGCGCGAATTGCCGCTGTACTACTGGGGCGACA TCGACACCCACGGCCTGGCGATCCTGCACCGCCTGCGCACGCACGCTCCGCACACCACCGCGGTGTTGATGAATGAGGCC ACCCTGCAGGCCACTCCGCGCGCGTTGTGGGGGCACGAACGCAGGCCGCACCGCGCCCAACGCCTGGCTGCGCTCAGCAT CCAGGAGCAGCGCCTGTATGCGGACCTGCGTGGCGGCCGGTTCGGTCCGTCGCCGCGCCTGGAGCAGGAACGTATCGCCT GGGACTATGCCTGGCCGCGCATCCAGGCCGCATTGGCGGACTGA
Upstream 100 bases:
>100_bases CGCTGCAGCGCCGCAGCGCGCGCGCAATCCATGCCTGGTGCACGCCGGTCGTCGCCATGCCGCCATGGCCCCGCACTGAT TGATGGCCCCCGCCGCGCCC
Downstream 100 bases:
>100_bases GCGTGGCCCTAGTCGTCGCCCCTGAAAAACCCCTCTCAAACCTCCAGTTTCAGATGTCCGATCACCGGCTCTACCGCTTG CCGTCGTTTGATCCAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MMLPAAALLALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQEWSRTGLPGRVEYRAVSWTQLGPQRL PQTWVLDDAGQAAGALGEGERWARARQRSAALQARWPQAVALAARLRRQFDLLADWPEVEFARLVAVVEWLHQHRDSGLF LRQLPIAGIDSKWIEPHRGVIADWLAGLRGIAEPRSFASLSGLRNAPDRVRLRLLDPALRHHIGGLEDITAPIAQIAALR LPVRRVLIVENRETGLACESLPGTLVLMARGYAVEYVSNIGWLRELPLYYWGDIDTHGLAILHRLRTHAPHTTAVLMNEA TLQATPRALWGHERRPHRAQRLAALSIQEQRLYADLRGGRFGPSPRLEQERIAWDYAWPRIQAALAD
Sequences:
>Translated_387_residues MMLPAAALLALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQEWSRTGLPGRVEYRAVSWTQLGPQRL PQTWVLDDAGQAAGALGEGERWARARQRSAALQARWPQAVALAARLRRQFDLLADWPEVEFARLVAVVEWLHQHRDSGLF LRQLPIAGIDSKWIEPHRGVIADWLAGLRGIAEPRSFASLSGLRNAPDRVRLRLLDPALRHHIGGLEDITAPIAQIAALR LPVRRVLIVENRETGLACESLPGTLVLMARGYAVEYVSNIGWLRELPLYYWGDIDTHGLAILHRLRTHAPHTTAVLMNEA TLQATPRALWGHERRPHRAQRLAALSIQEQRLYADLRGGRFGPSPRLEQERIAWDYAWPRIQAALAD >Mature_387_residues MMLPAAALLALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQEWSRTGLPGRVEYRAVSWTQLGPQRL PQTWVLDDAGQAAGALGEGERWARARQRSAALQARWPQAVALAARLRRQFDLLADWPEVEFARLVAVVEWLHQHRDSGLF LRQLPIAGIDSKWIEPHRGVIADWLAGLRGIAEPRSFASLSGLRNAPDRVRLRLLDPALRHHIGGLEDITAPIAQIAALR LPVRRVLIVENRETGLACESLPGTLVLMARGYAVEYVSNIGWLRELPLYYWGDIDTHGLAILHRLRTHAPHTTAVLMNEA TLQATPRALWGHERRPHRAQRLAALSIQEQRLYADLRGGRFGPSPRLEQERIAWDYAWPRIQAALAD
Specific function: Unknown
COG id: COG4924
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43434; Mature: 43434
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLPAAALLALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQEWSRTG CCCCHHHHHHHHCCHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC LPGRVEYRAVSWTQLGPQRLPQTWVLDDAGQAAGALGEGERWARARQRSAALQARWPQAV CCCCEEEEEEEHHHCCHHHCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH ALAARLRRQFDLLADWPEVEFARLVAVVEWLHQHRDSGLFLRQLPIAGIDSKWIEPHRGV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH IADWLAGLRGIAEPRSFASLSGLRNAPDRVRLRLLDPALRHHIGGLEDITAPIAQIAALR HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEHHHCHHHHHHCCCHHHHHHHHHHHHHHH LPVRRVLIVENRETGLACESLPGTLVLMARGYAVEYVSNIGWLRELPLYYWGDIDTHGLA HCCEEEEEEECCCCCCCHHCCCCEEEEEECCHHHHHHHHCCHHHHCCCCEECCCCCHHHH ILHRLRTHAPHTTAVLMNEATLQATPRALWGHERRPHRAQRLAALSIQEQRLYADLRGGR HHHHHHHCCCCCEEEEEECHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC FGPSPRLEQERIAWDYAWPRIQAALAD CCCCCCCCHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MMLPAAALLALRGQWQRARGQWLIGEGAPQAIGLRAPTQAQAIARFDAFGAWLQEWSRTG CCCCHHHHHHHHCCHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC LPGRVEYRAVSWTQLGPQRLPQTWVLDDAGQAAGALGEGERWARARQRSAALQARWPQAV CCCCEEEEEEEHHHCCHHHCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHH ALAARLRRQFDLLADWPEVEFARLVAVVEWLHQHRDSGLFLRQLPIAGIDSKWIEPHRGV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCH IADWLAGLRGIAEPRSFASLSGLRNAPDRVRLRLLDPALRHHIGGLEDITAPIAQIAALR HHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEHHHCHHHHHHCCCHHHHHHHHHHHHHHH LPVRRVLIVENRETGLACESLPGTLVLMARGYAVEYVSNIGWLRELPLYYWGDIDTHGLA HCCEEEEEEECCCCCCCHHCCCCEEEEEECCHHHHHHHHCCHHHHCCCCEECCCCCHHHH ILHRLRTHAPHTTAVLMNEATLQATPRALWGHERRPHRAQRLAALSIQEQRLYADLRGGR HHHHHHHCCCCCEEEEEECHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC FGPSPRLEQERIAWDYAWPRIQAALAD CCCCCCCCHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA