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The map label for this gene is insC1 [C]

Identifier: 84625918

GI number: 84625918

Start: 4818373

End: 4818765

Strand: Reverse

Name: insC1 [C]

Synonym: XOO_4261

Alternate gene names: 84625918

Gene position: 4818765-4818373 (Counterclockwise)

Preceding gene: 84625920

Following gene: 84625917

Centisome position: 97.54

GC content: 63.61

Gene sequence:

>393_bases
GTGAAGAAGCGTTTTTCCGAAGAGCAGATCATCGGCTTCCTGCGCGAAGCCGAGGCCGGCATGCCGATCAAGGACCTGTG
CCGACGGCATGGCTTCAGTGAGGCTTCCTACTACCTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGC
GGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAG
GATGCGCTGCAAAAAAATGGTGAGCGCACCGGCGCGTCGTACGCTGGTGCGCGAGTGGATCGCAGGTGGCGCCAGCGAGC
GCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGTGCGCTGCGCTATCGCCCGGGCGAGGTCCGCAACGTTGA

Upstream 100 bases:

>100_bases
CGCGTCATAGCCTTTCTGGCCGGCTGTATCACCGACGTCCCCCCAAGTTTGAGTAGCACCTCAGTTTGCAATCCAATTCC
CTATCCCGAGGAGATTGGAC

Downstream 100 bases:

>100_bases
GTTGCGCGAGCACAGTGTTGCGTTGGCGCATCGCCATCGCCGCTACGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGG
AAGGTCGCCTCGTGAACTAT

Product: ISXoo3 transposase orfA

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKNGERTGASYAGARVDRRWRQRALRPGSDRHERQCAALSPGRGPQR

Sequences:

>Translated_130_residues
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKNGERTGASYAGARVDRRWRQRALRPGSDRHERQCAALSPGRGPQR
>Mature_130_residues
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNDLIK
DALQKNGERTGASYAGARVDRRWRQRALRPGSDRHERQCAALSPGRGPQR

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14963; Mature: 14963

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ENTRLKKLLAEQVFQNDLIKDALQKNGERTGASYAGARVDRRWRQRALRPGSDRHERQCA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ALSPGRGPQR
HCCCCCCCCC
>Mature Secondary Structure
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEA
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ENTRLKKLLAEQVFQNDLIKDALQKNGERTGASYAGARVDRRWRQRALRPGSDRHERQCA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ALSPGRGPQR
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]