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The map label for this gene is 84625910

Identifier: 84625910

GI number: 84625910

Start: 4808714

End: 4809925

Strand: Reverse

Name: 84625910

Synonym: XOO_4253

Alternate gene names: NA

Gene position: 4809925-4808714 (Counterclockwise)

Preceding gene: 84625915

Following gene: 84625909

Centisome position: 97.36

GC content: 64.03

Gene sequence:

>1212_bases
ATGCCGATGTTGTCCGAACCGCTCATCGACTTTTTGACGTCAGGCGTTGCAAGGCTGGGTGTGTGGGGCATGCTGGCGGT
GCTGCTGGTGTTCACTCAGCTCACCATCTTTGCGGTGACCTTGTACCTGCATCGCAGCCAGGCGCATCGCGGTGTGGATT
TCCACCCGGTCATTGCGCATTTTTTCCGCTTCTGGACCTGGTTTACTACCTCGATGATCAGCCGCGAGTGGGTGGCGATC
CATCGCAAGCACCACGCCAAGGTCGAGACCGAAGAAGACCCGCACAGCCCGCAGAGCAAAGGCATCTCGCAGGTGTTCTG
GCGCGGCGTGGAGTTGTACCGCGAGGCGCGCACGCAGCGCGCCGATATCGAGCAGTACGGTAAGGCCGCGCCGACCGACT
GGATCGAGCGGCACCTGTACACGCCGCATGCCAACGCAGGCCCGGTCGCCTTGCTGGTGATCAACTCGGTGTTGTTCGGG
TTGCCGGGTATCGCGTTGTGGGCGGTCCAGATGGCGTGGATTCCGTTCTGGGCCGCCGGTGTGGTCAACGTCCTGGGCCA
CTGGTGGGGCTACCGCAACTTCGAATCGGCCGACACCTCCACCAACCTCACGCCTTGGGCGCTGCGGATCGGTGGCGAAG
AATTGCACACCCACCATCATGCCTTCCCGAGTTCGGCACGCTTTTCGATGCGGCGTTGGGAGCTGGATATCGGTTGGGTC
GTCATTCGCAGCGTGCAGGCGTTTGGCCTGGCCAAGGTGTTGCGGGTGGCGCCGTCGCTGGATATCCGACCGAATATCGC
CGTGCTCGATGCCGATACGCTCAAGCCGCTGTTGTCGCACCGCTTCCAGGCAATGACCGACTATCAGCGCAATGTGCTCA
AGCCTGCATTGCGCGAAGAGGCGGCTGCTACCGGCGCCAAGCTGCGCGAGTTGCTGCCGCGCCGCTTGCGCAAGGGTCTG
GTCGATGACGGGCGCTGGCTCAAACCGGAGGCACGCGCGCAGTTGCAGACCTGGGTGGCGCAGCGTCCGCGCATGCGCAC
CCTGGTCGAGTACCGTGCGCGGCTGACGGCCGTGCTGGAAGCGCGCAGCCACGATGCCTCCGAACGGCTCAGGCAGTTGC
AGCAGTGGTGCCATGAGGCCGAAGCCAGCGGCAATGCCGCCTTGCAGGCGTATGCAGCGCGGCTCAAAGGGGATGCGCTG
AGTGGCGCCTAA

Upstream 100 bases:

>100_bases
CGCTTTAGAAACGTAGATGCGACCCTACGCATCCGGAGGGTGAAGTTTGCCGCGATCGCCCCCATCATGTCTGCACCAAC
CCGAGAGCGCTGCTGTGGAG

Downstream 100 bases:

>100_bases
TGCGGGCGGCAGGCGCGCAGTGGTGCGTGAACATGGTGCGTGCGGCGTGAGCATGCGTCGTTTGCTGATTGCATGTCTTG
CATCCTTGCCTGCGGTTGCA

Product: fatty acid desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Acyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Stearoyl-CoA Desaturase Oxidoreductase; Delta-9 Fatty Ac Id Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Transmembrane Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Domain Protein; Stearoyl-CoA Desaturase Oxidoreductase Protein; Fatty Acid Desaturase Family; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MPMLSEPLIDFLTSGVARLGVWGMLAVLLVFTQLTIFAVTLYLHRSQAHRGVDFHPVIAHFFRFWTWFTTSMISREWVAI
HRKHHAKVETEEDPHSPQSKGISQVFWRGVELYREARTQRADIEQYGKAAPTDWIERHLYTPHANAGPVALLVINSVLFG
LPGIALWAVQMAWIPFWAAGVVNVLGHWWGYRNFESADTSTNLTPWALRIGGEELHTHHHAFPSSARFSMRRWELDIGWV
VIRSVQAFGLAKVLRVAPSLDIRPNIAVLDADTLKPLLSHRFQAMTDYQRNVLKPALREEAAATGAKLRELLPRRLRKGL
VDDGRWLKPEARAQLQTWVAQRPRMRTLVEYRARLTAVLEARSHDASERLRQLQQWCHEAEASGNAALQAYAARLKGDAL
SGA

Sequences:

>Translated_403_residues
MPMLSEPLIDFLTSGVARLGVWGMLAVLLVFTQLTIFAVTLYLHRSQAHRGVDFHPVIAHFFRFWTWFTTSMISREWVAI
HRKHHAKVETEEDPHSPQSKGISQVFWRGVELYREARTQRADIEQYGKAAPTDWIERHLYTPHANAGPVALLVINSVLFG
LPGIALWAVQMAWIPFWAAGVVNVLGHWWGYRNFESADTSTNLTPWALRIGGEELHTHHHAFPSSARFSMRRWELDIGWV
VIRSVQAFGLAKVLRVAPSLDIRPNIAVLDADTLKPLLSHRFQAMTDYQRNVLKPALREEAAATGAKLRELLPRRLRKGL
VDDGRWLKPEARAQLQTWVAQRPRMRTLVEYRARLTAVLEARSHDASERLRQLQQWCHEAEASGNAALQAYAARLKGDAL
SGA
>Mature_402_residues
PMLSEPLIDFLTSGVARLGVWGMLAVLLVFTQLTIFAVTLYLHRSQAHRGVDFHPVIAHFFRFWTWFTTSMISREWVAIH
RKHHAKVETEEDPHSPQSKGISQVFWRGVELYREARTQRADIEQYGKAAPTDWIERHLYTPHANAGPVALLVINSVLFGL
PGIALWAVQMAWIPFWAAGVVNVLGHWWGYRNFESADTSTNLTPWALRIGGEELHTHHHAFPSSARFSMRRWELDIGWVV
IRSVQAFGLAKVLRVAPSLDIRPNIAVLDADTLKPLLSHRFQAMTDYQRNVLKPALREEAAATGAKLRELLPRRLRKGLV
DDGRWLKPEARAQLQTWVAQRPRMRTLVEYRARLTAVLEARSHDASERLRQLQQWCHEAEASGNAALQAYAARLKGDALS
GA

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45866; Mature: 45735

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMLSEPLIDFLTSGVARLGVWGMLAVLLVFTQLTIFAVTLYLHRSQAHRGVDFHPVIAH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FFRFWTWFTTSMISREWVAIHRKHHAKVETEEDPHSPQSKGISQVFWRGVELYREARTQR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHH
ADIEQYGKAAPTDWIERHLYTPHANAGPVALLVINSVLFGLPGIALWAVQMAWIPFWAAG
HHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VVNVLGHWWGYRNFESADTSTNLTPWALRIGGEELHTHHHAFPSSARFSMRRWELDIGWV
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHCCCHHHH
VIRSVQAFGLAKVLRVAPSLDIRPNIAVLDADTLKPLLSHRFQAMTDYQRNVLKPALREE
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAATGAKLRELLPRRLRKGLVDDGRWLKPEARAQLQTWVAQRPRMRTLVEYRARLTAVLE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ARSHDASERLRQLQQWCHEAEASGNAALQAYAARLKGDALSGA
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PMLSEPLIDFLTSGVARLGVWGMLAVLLVFTQLTIFAVTLYLHRSQAHRGVDFHPVIAH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FFRFWTWFTTSMISREWVAIHRKHHAKVETEEDPHSPQSKGISQVFWRGVELYREARTQR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHH
ADIEQYGKAAPTDWIERHLYTPHANAGPVALLVINSVLFGLPGIALWAVQMAWIPFWAAG
HHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VVNVLGHWWGYRNFESADTSTNLTPWALRIGGEELHTHHHAFPSSARFSMRRWELDIGWV
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHCCCHHHH
VIRSVQAFGLAKVLRVAPSLDIRPNIAVLDADTLKPLLSHRFQAMTDYQRNVLKPALREE
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAATGAKLRELLPRRLRKGLVDDGRWLKPEARAQLQTWVAQRPRMRTLVEYRARLTAVLE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ARSHDASERLRQLQQWCHEAEASGNAALQAYAARLKGDALSGA
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA