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The map label for this gene is 84625899

Identifier: 84625899

GI number: 84625899

Start: 4794470

End: 4795387

Strand: Reverse

Name: 84625899

Synonym: XOO_4242

Alternate gene names: NA

Gene position: 4795387-4794470 (Counterclockwise)

Preceding gene: 84625900

Following gene: 84625898

Centisome position: 97.07

GC content: 63.51

Gene sequence:

>918_bases
ATGGCGGTAGATGCATTTGCCTTGATTCTGGCCATGTTGGGGCTGGGCCTGCTGTTCGCCCGCCTGCGGGTGTTGCCCGA
CAACAGCGCCGATGTGCTCAACCTTATCGTGCTGTACATCTGCCTGCCGGCGTCGGTGCTGACCTATGTCCCGCGGCTGC
ATCTGGACGCATCGCTGGGCGGGGTGATTGCCACGCCGTGGTTGCTCACCGCCATCATCGTGCCGTTGCTGTGGGGCTGC
AGCCGCCTGCTGCGCTTCGGCCGCGCCGAATACGCCGCGCTGCTGATGTGCGTGGTGTTCACCAATTCCAGCTTTATCGG
CTTCCCGATGGTGCGCGCACTGATCGGCGATCACGCGCTGCCCTATGCAGTGGTTTACGACCAGTTCGGCACCTTCGTGT
TGCTGTCTACGTTCGGGTTGTACGTGCTGGCCCGCTATAGCGGCGATACCCCGCCAACCGGGCGGCTGATCCTGATGCGG
GTGCTGCAGTTTCCACCGTTGTGGGCGCTGCTGTTCGCCCTGACGCTGATGCCCGAGCAACCGCCGAACTGGATCGGCTC
AGGCCTCAAGAACCTTTCCGATGCGATGTTGCCGCTGGTGATGCTGTCGGTAGGTTTTTCGCTGCAGCTGCGCCTGCCCG
CGGACGAACTCAAGCCGCTGGCGGTGGGCCTGATATTCAAGCTGTTGCTGATACCGGTCCTGGCCTTGCCGCTGTCCTGG
GTACTCGGCCTGCACGGCCAGATGCTGCAGACCAATGTGCTCGAATCGGCCATGCCCACCATGATCACTGCCGCCGCGCT
GGCCATTTCGCACCGGCTGGCGCCACGCCTGGCTGCAGCGATGGTTGGCTACAGCATTTTGTTGTCGTTGCTGACGCTGC
CTGCGTGGGCCTGGCTGCTGGCGCGGTTGGTGGCGTAA

Upstream 100 bases:

>100_bases
CACTTCCTTGCGTTGCGCCAAGCCAGGCTGGCTTTTCCAGTGAAACGTGCGCCGCCATGCGATCCTGTGCACGGCTTTCC
AACGGACACGATCACGCGCC

Downstream 100 bases:

>100_bases
GGCTGCGGCGCTGACATGCGCCGTGCGGCAGCGGGACAGCAGCTGCATGCGCTTGCGTCCGGTCGCTCGGTTACACGCCG
AGGTCCAATGCCGCTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAVDAFALILAMLGLGLLFARLRVLPDNSADVLNLIVLYICLPASVLTYVPRLHLDASLGGVIATPWLLTAIIVPLLWGC
SRLLRFGRAEYAALLMCVVFTNSSFIGFPMVRALIGDHALPYAVVYDQFGTFVLLSTFGLYVLARYSGDTPPTGRLILMR
VLQFPPLWALLFALTLMPEQPPNWIGSGLKNLSDAMLPLVMLSVGFSLQLRLPADELKPLAVGLIFKLLLIPVLALPLSW
VLGLHGQMLQTNVLESAMPTMITAAALAISHRLAPRLAAAMVGYSILLSLLTLPAWAWLLARLVA

Sequences:

>Translated_305_residues
MAVDAFALILAMLGLGLLFARLRVLPDNSADVLNLIVLYICLPASVLTYVPRLHLDASLGGVIATPWLLTAIIVPLLWGC
SRLLRFGRAEYAALLMCVVFTNSSFIGFPMVRALIGDHALPYAVVYDQFGTFVLLSTFGLYVLARYSGDTPPTGRLILMR
VLQFPPLWALLFALTLMPEQPPNWIGSGLKNLSDAMLPLVMLSVGFSLQLRLPADELKPLAVGLIFKLLLIPVLALPLSW
VLGLHGQMLQTNVLESAMPTMITAAALAISHRLAPRLAAAMVGYSILLSLLTLPAWAWLLARLVA
>Mature_304_residues
AVDAFALILAMLGLGLLFARLRVLPDNSADVLNLIVLYICLPASVLTYVPRLHLDASLGGVIATPWLLTAIIVPLLWGCS
RLLRFGRAEYAALLMCVVFTNSSFIGFPMVRALIGDHALPYAVVYDQFGTFVLLSTFGLYVLARYSGDTPPTGRLILMRV
LQFPPLWALLFALTLMPEQPPNWIGSGLKNLSDAMLPLVMLSVGFSLQLRLPADELKPLAVGLIFKLLLIPVLALPLSWV
LGLHGQMLQTNVLESAMPTMITAAALAISHRLAPRLAAAMVGYSILLSLLTLPAWAWLLARLVA

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33122; Mature: 32990

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVDAFALILAMLGLGLLFARLRVLPDNSADVLNLIVLYICLPASVLTYVPRLHLDASLG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVIATPWLLTAIIVPLLWGCSRLLRFGRAEYAALLMCVVFTNSSFIGFPMVRALIGDHAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PYAVVYDQFGTFVLLSTFGLYVLARYSGDTPPTGRLILMRVLQFPPLWALLFALTLMPEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
PPNWIGSGLKNLSDAMLPLVMLSVGFSLQLRLPADELKPLAVGLIFKLLLIPVLALPLSW
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLHGQMLQTNVLESAMPTMITAAALAISHRLAPRLAAAMVGYSILLSLLTLPAWAWLL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLVA
HHHHC
>Mature Secondary Structure 
AVDAFALILAMLGLGLLFARLRVLPDNSADVLNLIVLYICLPASVLTYVPRLHLDASLG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVIATPWLLTAIIVPLLWGCSRLLRFGRAEYAALLMCVVFTNSSFIGFPMVRALIGDHAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PYAVVYDQFGTFVLLSTFGLYVLARYSGDTPPTGRLILMRVLQFPPLWALLFALTLMPEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC
PPNWIGSGLKNLSDAMLPLVMLSVGFSLQLRLPADELKPLAVGLIFKLLLIPVLALPLSW
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLHGQMLQTNVLESAMPTMITAAALAISHRLAPRLAAAMVGYSILLSLLTLPAWAWLL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLVA
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]