Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625896

Identifier: 84625896

GI number: 84625896

Start: 4792417

End: 4792989

Strand: Reverse

Name: 84625896

Synonym: XOO_4239

Alternate gene names: NA

Gene position: 4792989-4792417 (Counterclockwise)

Preceding gene: 84625897

Following gene: 84625895

Centisome position: 97.02

GC content: 60.38

Gene sequence:

>573_bases
GTGTCATCGTCGCTGCGCTGGTTCGCCTGGCTCGCGCTCTGGGTCACACTGCCTTGTCTGGCGCAGCAGAAGGTGCATTT
CATCGACCCGGCGCAATCGCGCTTCGGATTCGAGATCAAAACCCGTTTCGGAATGAAGATCGAGGGGTTTTTCCCACGGT
TTCGCGGTGAAGTGGTCGAACTGCCGGACAAACGCAAGCAGGTGCGGTTCTGGCTGGATGCCACCCAGGTGGAGATCCCG
GGCAAGGACCGTTACACCAGCTGGATGCGGGGCGAGGATTTTTTCGATGTTGCGCACTACCCGGTCGTCGAATTCGAGTC
GCTTCCGTATACCGACGATGTGATCAAGGGCGGTGGCGACATCACCGGCAACCTGACCATCCGCGGAATCACCCACATCG
AGACCCTGCATGTACTTCCGGCCGAATGCACCCGGACGGGCTATGATTGCGACGTGATCAGTCGAGGTACGGTCCTGCGT
GGACGTTACGGAATGAATGCGTGGCAGATGGCACTGGGCGACGGGGTGACGTTCATTCTGCGTGGGCGCTTGCAGGAGGC
GCGGCACCCGTGA

Upstream 100 bases:

>100_bases
TGGCATGCCCACCGCCTCGATCGCGTTGCTGGCTTTGCCGCTGGACGCCACCATCGAGCCGGGCATCGCCCGCCTGACCG
CCTTCTGGTGGCCTTGACCC

Downstream 100 bases:

>100_bases
AGTGCCTGTTGAGGGTTCTCGTGCTGGCAACGGTGTTGCTCGGCACCGGATGCGCCAGCCTGTCGCAAACCGAACGCAAC
CGTGCTGCCGGCGTCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSSSLRWFAWLALWVTLPCLAQQKVHFIDPAQSRFGFEIKTRFGMKIEGFFPRFRGEVVELPDKRKQVRFWLDATQVEIP
GKDRYTSWMRGEDFFDVAHYPVVEFESLPYTDDVIKGGGDITGNLTIRGITHIETLHVLPAECTRTGYDCDVISRGTVLR
GRYGMNAWQMALGDGVTFILRGRLQEARHP

Sequences:

>Translated_190_residues
MSSSLRWFAWLALWVTLPCLAQQKVHFIDPAQSRFGFEIKTRFGMKIEGFFPRFRGEVVELPDKRKQVRFWLDATQVEIP
GKDRYTSWMRGEDFFDVAHYPVVEFESLPYTDDVIKGGGDITGNLTIRGITHIETLHVLPAECTRTGYDCDVISRGTVLR
GRYGMNAWQMALGDGVTFILRGRLQEARHP
>Mature_189_residues
SSSLRWFAWLALWVTLPCLAQQKVHFIDPAQSRFGFEIKTRFGMKIEGFFPRFRGEVVELPDKRKQVRFWLDATQVEIPG
KDRYTSWMRGEDFFDVAHYPVVEFESLPYTDDVIKGGGDITGNLTIRGITHIETLHVLPAECTRTGYDCDVISRGTVLRG
RYGMNAWQMALGDGVTFILRGRLQEARHP

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21860; Mature: 21729

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSLRWFAWLALWVTLPCLAQQKVHFIDPAQSRFGFEIKTRFGMKIEGFFPRFRGEVVE
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCEEEEEECCCEEECCCCCCCCCEEE
LPDKRKQVRFWLDATQVEIPGKDRYTSWMRGEDFFDVAHYPVVEFESLPYTDDVIKGGGD
CCCCCCEEEEEEECEEEEECCCCCCHHHCCCCCCCHHCCCCEEEECCCCCCHHHHCCCCC
ITGNLTIRGITHIETLHVLPAECTRTGYDCDVISRGTVLRGRYGMNAWQMALGDGVTFIL
EEEEEEEEEEEEEEEEEECCHHHHCCCCCCCEECCCCEEECCCCCCHHHHHHCCCEEEEE
RGRLQEARHP
ECHHHHCCCC
>Mature Secondary Structure 
SSSLRWFAWLALWVTLPCLAQQKVHFIDPAQSRFGFEIKTRFGMKIEGFFPRFRGEVVE
CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHCCEEEEEECCCEEECCCCCCCCCEEE
LPDKRKQVRFWLDATQVEIPGKDRYTSWMRGEDFFDVAHYPVVEFESLPYTDDVIKGGGD
CCCCCCEEEEEEECEEEEECCCCCCHHHCCCCCCCHHCCCCEEEECCCCCCHHHHCCCCC
ITGNLTIRGITHIETLHVLPAECTRTGYDCDVISRGTVLRGRYGMNAWQMALGDGVTFIL
EEEEEEEEEEEEEEEEEECCHHHHCCCCCCCEECCCCEEECCCCCCHHHHHHCCCEEEEE
RGRLQEARHP
ECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA