Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625858

Identifier: 84625858

GI number: 84625858

Start: 4746098

End: 4746856

Strand: Reverse

Name: 84625858

Synonym: XOO_4201

Alternate gene names: NA

Gene position: 4746856-4746098 (Counterclockwise)

Preceding gene: 84625859

Following gene: 84625856

Centisome position: 96.09

GC content: 52.7

Gene sequence:

>759_bases
ATGATCAAGCCATCGTTGCACGCTTGGTTGAAACCAGATACGTGGACGCCCGAAAAGGCATATGAACTAGTAAACACACT
TGTCAATCAGCTCGGGACGATGCATCCCGATTTACGGGAGTGGGATGATCTTCCTCAAGGTCCGAAAGACAAGTCTGTGC
GATTGACGGATAGAGCTGCCATCATCGCGAGAATCCTAAGAAAAATAGAGAAGCGTAAAAGCTCCAGCCCCCAGATGCCC
AATGCAGAAAGTGCAGATCTCAATGTGACCAATGCCCTTACTGAAAAAGCGTGGAAGGAGCCTGGTCGCTCAGTGATATC
TTTTACTCCGTGGGATGGCGCATTCAGCATTGATATGCTCGACCCGCAAAAGAGATTTGGTGAAGAGCTCACAAGGAGAA
TTTTCGTCCAGACACTATCGAGCGTGGCCAGCCTTCTCCCCTTGAAGTTTGCCGCTGCTGATACAAAAGTTCATCGAGAT
GGAAAGTCGACCCTCTACCAGATTGACAAAAAGCTTTTCCCTCACCGCCAATATTTCGGATGGATGGGCTTTGTGCCGAC
AGAGCTCAGCCACGCCCAGATTCGCGACGCAGACGAAATGATCGCCGTGCCGGGCAAGGGAACCATCATCGTCACCGTCC
CTGGCCTGTTCGATCCCACCGATGCAGCGCAGGTCGAGCAGGTGCATCGGGTGGAGATGCAACTGGCGCACTACAACCTG
CTGCGCGTTACAGACCCGGACTTGAGGGATGCCCCCTGA

Upstream 100 bases:

>100_bases
GGTTTTTCATGCATCCGCGGTCGATGCTTGCGGCCGTTGAGTTGGCCGGGCTGGATGTATCGCTCTGCACCGCTCTTCCG
ATGCCAGGGGAAAAAATTCT

Downstream 100 bases:

>100_bases
TCGGCGCGTGCTGAAGCATTTTGTTGCTGCAAGCCTACGGATACTATCGGGCGCCGAGCGCAGGGTATGTATCGGAACTT
CGTGATCAACTGATCCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIKPSLHAWLKPDTWTPEKAYELVNTLVNQLGTMHPDLREWDDLPQGPKDKSVRLTDRAAIIARILRKIEKRKSSSPQMP
NAESADLNVTNALTEKAWKEPGRSVISFTPWDGAFSIDMLDPQKRFGEELTRRIFVQTLSSVASLLPLKFAAADTKVHRD
GKSTLYQIDKKLFPHRQYFGWMGFVPTELSHAQIRDADEMIAVPGKGTIIVTVPGLFDPTDAAQVEQVHRVEMQLAHYNL
LRVTDPDLRDAP

Sequences:

>Translated_252_residues
MIKPSLHAWLKPDTWTPEKAYELVNTLVNQLGTMHPDLREWDDLPQGPKDKSVRLTDRAAIIARILRKIEKRKSSSPQMP
NAESADLNVTNALTEKAWKEPGRSVISFTPWDGAFSIDMLDPQKRFGEELTRRIFVQTLSSVASLLPLKFAAADTKVHRD
GKSTLYQIDKKLFPHRQYFGWMGFVPTELSHAQIRDADEMIAVPGKGTIIVTVPGLFDPTDAAQVEQVHRVEMQLAHYNL
LRVTDPDLRDAP
>Mature_252_residues
MIKPSLHAWLKPDTWTPEKAYELVNTLVNQLGTMHPDLREWDDLPQGPKDKSVRLTDRAAIIARILRKIEKRKSSSPQMP
NAESADLNVTNALTEKAWKEPGRSVISFTPWDGAFSIDMLDPQKRFGEELTRRIFVQTLSSVASLLPLKFAAADTKVHRD
GKSTLYQIDKKLFPHRQYFGWMGFVPTELSHAQIRDADEMIAVPGKGTIIVTVPGLFDPTDAAQVEQVHRVEMQLAHYNL
LRVTDPDLRDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28533; Mature: 28533

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKPSLHAWLKPDTWTPEKAYELVNTLVNQLGTMHPDLREWDDLPQGPKDKSVRLTDRAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEHHHHH
IIARILRKIEKRKSSSPQMPNAESADLNVTNALTEKAWKEPGRSVISFTPWDGAFSIDML
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEECC
DPQKRFGEELTRRIFVQTLSSVASLLPLKFAAADTKVHRDGKSTLYQIDKKLFPHRQYFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHH
WMGFVPTELSHAQIRDADEMIAVPGKGTIIVTVPGLFDPTDAAQVEQVHRVEMQLAHYNL
CCCCCCCCCCHHHHCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEE
LRVTDPDLRDAP
EEECCCCCCCCC
>Mature Secondary Structure
MIKPSLHAWLKPDTWTPEKAYELVNTLVNQLGTMHPDLREWDDLPQGPKDKSVRLTDRAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEHHHHH
IIARILRKIEKRKSSSPQMPNAESADLNVTNALTEKAWKEPGRSVISFTPWDGAFSIDML
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCEEEECC
DPQKRFGEELTRRIFVQTLSSVASLLPLKFAAADTKVHRDGKSTLYQIDKKLFPHRQYFG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHH
WMGFVPTELSHAQIRDADEMIAVPGKGTIIVTVPGLFDPTDAAQVEQVHRVEMQLAHYNL
CCCCCCCCCCHHHHCCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEE
LRVTDPDLRDAP
EEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA