| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625838
Identifier: 84625838
GI number: 84625838
Start: 4728092
End: 4728268
Strand: Reverse
Name: 84625838
Synonym: XOO_4181
Alternate gene names: NA
Gene position: 4728268-4728092 (Counterclockwise)
Preceding gene: 84625843
Following gene: 84625830
Centisome position: 95.71
GC content: 64.41
Gene sequence:
>177_bases ATGACAACGCAGAAAGAACGCGTCGGCGGCACCGACGCAGTGCCGATTTTCAAGATGCAGGAAACCACACGCGACGGCGA GCTGACCAAGTACGTGGTCGGCGACACCGGCGTGGCCTTCGACAGCCTGGAAGGCGCCCAGGCGGCCGCCAAGGATCTGG GCACGCTCAACGGCTGA
Upstream 100 bases:
>100_bases GCACGCGATGCCGCGTTAGGATCGGATCGTCTGCGCTCCCGGACGGGAGCCGCGGGACAATCCGGTCCCATGCAGGGCGC TTTCACTGGAGGCATCACCC
Downstream 100 bases:
>100_bases CCTTAGGCGACGTGTCAGCAGCACGCTGGTCGTCCCACTGCGTGCCCCTGCGCTTGATTGCCTGCATCGTATATGGCGAT CAAGCCAGCGGACCGGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MTTQKERVGGTDAVPIFKMQETTRDGELTKYVVGDTGVAFDSLEGAQAAAKDLGTLNG
Sequences:
>Translated_58_residues MTTQKERVGGTDAVPIFKMQETTRDGELTKYVVGDTGVAFDSLEGAQAAAKDLGTLNG >Mature_57_residues TTQKERVGGTDAVPIFKMQETTRDGELTKYVVGDTGVAFDSLEGAQAAAKDLGTLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6091; Mature: 5960
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQKERVGGTDAVPIFKMQETTRDGELTKYVVGDTGVAFDSLEGAQAAAKDLGTLNG CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure TTQKERVGGTDAVPIFKMQETTRDGELTKYVVGDTGVAFDSLEGAQAAAKDLGTLNG CCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA