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The map label for this gene is rdgC [H]

Identifier: 84625815

GI number: 84625815

Start: 4695704

End: 4696609

Strand: Reverse

Name: rdgC [H]

Synonym: XOO_4158

Alternate gene names: 84625815

Gene position: 4696609-4695704 (Counterclockwise)

Preceding gene: 84625816

Following gene: 84625814

Centisome position: 95.07

GC content: 62.91

Gene sequence:

>906_bases
ATGTTCTTTCGCAATCTCACCCTGTTCCGCTTTCCCACCACCCTGGATTTTTCGCAGATCGACACGCTGCTGCCGCCCGT
GCAGCTCAAGCCGGTCGGCCCGCTGGAAATGAGCTCGCGCGGTTTCATTTCCCCGTTCGGTCGTGACGAGCAGGGTGTGC
TTTCGCACCGTCTGGAAGATTTTCTGTGGCTCACCGTCGGTGGCGAGGACAAGATCCTGCCTGGCGCGGTGGTCAACGAT
CTGCTCGAGCGCAAAGTCGCCGAGATCGAGGAAAAGGAAGGCCGCCGCCCCGGTGGCAAGGCACGCAAGCGCCTCAAGGA
CGACCTGATCCATGAGCTGCTGCCGCGCGCCTTCGTCAAGAGCTCGCGCACCGACGCCATCCTGGACCTGCAGCACGGCT
ATATCGCGGTCAACAGTTCCAGCCGTAAGAGCGGCGAGAACGTGATGAGCGAGATCCGCGGGGCGCTGGGCAGCTTCCCG
GCGCTGCCGCTCAATGCCGAAGTGGCTCCGCGCGCCATCCTCACCGGCTGGATTGCCGGCGAGCCCCTGCCCGAAGGCCT
GAGCCTGGGCGAAGAGTGCGAGATGAAGGACCCCATCGAAGGCGGTGCGGTGGTCAAGTGCCAGCATCAGGAACTGCGCG
GCGACGAGATCGACAAGCATCTGGAAGCCGGCAAGCAGGTCACCAAGCTGGCGCTGGTGCTGGACGACAATCTGTCGTTC
GTGCTCGGCGACGATCTGGTGATTCGCAAGCTCAAGTTCCTCGACGGTGCCCTGGATCAGCTCGAACACAGCGAAGACGA
TGGCGCGCGCGCCGAACTCGACGCACGCTTTACGCTGATGAGCGCGGAAATCCGCCGGCTGTTCCTGTTGCTGGAAACCG
CGTTGAAGTTGAGCAAGGCAGAGTAA

Upstream 100 bases:

>100_bases
GCTAACGGCCAGCGACGCCACCCACGATAGCGACTGACGCGGCCGATCCGGCTGCCGGCAGTCTTCCACCCTCCACGTTT
TTCTTCATTCGGTCCAACGC

Downstream 100 bases:

>100_bases
CCAAGCGTCGACCTGTGGCGGCGTCTTCAGGCGCGAGCCAAAGCGCGGTGGGTCGAGGGCGCGGTGCCCTCACCGCGTGT
GGGACACGCCGTGAATCCAT

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MFFRNLTLFRFPTTLDFSQIDTLLPPVQLKPVGPLEMSSRGFISPFGRDEQGVLSHRLEDFLWLTVGGEDKILPGAVVND
LLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVKSSRTDAILDLQHGYIAVNSSSRKSGENVMSEIRGALGSFP
ALPLNAEVAPRAILTGWIAGEPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSF
VLGDDLVIRKLKFLDGALDQLEHSEDDGARAELDARFTLMSAEIRRLFLLLETALKLSKAE

Sequences:

>Translated_301_residues
MFFRNLTLFRFPTTLDFSQIDTLLPPVQLKPVGPLEMSSRGFISPFGRDEQGVLSHRLEDFLWLTVGGEDKILPGAVVND
LLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVKSSRTDAILDLQHGYIAVNSSSRKSGENVMSEIRGALGSFP
ALPLNAEVAPRAILTGWIAGEPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSF
VLGDDLVIRKLKFLDGALDQLEHSEDDGARAELDARFTLMSAEIRRLFLLLETALKLSKAE
>Mature_301_residues
MFFRNLTLFRFPTTLDFSQIDTLLPPVQLKPVGPLEMSSRGFISPFGRDEQGVLSHRLEDFLWLTVGGEDKILPGAVVND
LLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVKSSRTDAILDLQHGYIAVNSSSRKSGENVMSEIRGALGSFP
ALPLNAEVAPRAILTGWIAGEPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSF
VLGDDLVIRKLKFLDGALDQLEHSEDDGARAELDARFTLMSAEIRRLFLLLETALKLSKAE

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=290, Percent_Identity=33.448275862069, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 33357; Mature: 33357

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFRNLTLFRFPTTLDFSQIDTLLPPVQLKPVGPLEMSSRGFISPFGRDEQGVLSHRLED
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FLWLTVGGEDKILPGAVVNDLLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVK
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSRTDAILDLQHGYIAVNSSSRKSGENVMSEIRGALGSFPALPLNAEVAPRAILTGWIAG
CCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
EPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSF
CCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCE
VLGDDLVIRKLKFLDGALDQLEHSEDDGARAELDARFTLMSAEIRRLFLLLETALKLSKA
EECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure
MFFRNLTLFRFPTTLDFSQIDTLLPPVQLKPVGPLEMSSRGFISPFGRDEQGVLSHRLED
CCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
FLWLTVGGEDKILPGAVVNDLLERKVAEIEEKEGRRPGGKARKRLKDDLIHELLPRAFVK
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SSRTDAILDLQHGYIAVNSSSRKSGENVMSEIRGALGSFPALPLNAEVAPRAILTGWIAG
CCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC
EPLPEGLSLGEECEMKDPIEGGAVVKCQHQELRGDEIDKHLEAGKQVTKLALVLDDNLSF
CCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCE
VLGDDLVIRKLKFLDGALDQLEHSEDDGARAELDARFTLMSAEIRRLFLLLETALKLSKA
EECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA