| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is tatA
Identifier: 84625809
GI number: 84625809
Start: 4690307
End: 4690534
Strand: Reverse
Name: tatA
Synonym: XOO_4152
Alternate gene names: 84625809
Gene position: 4690534-4690307 (Counterclockwise)
Preceding gene: 84625810
Following gene: 84625808
Centisome position: 94.95
GC content: 64.04
Gene sequence:
>228_bases ATGGGCGGTTTCAGCATTTGGCACTGGCTGATCGTGCTGGTGATCGTGTTGCTGGTGTTCGGTACCAAACGGCTTACCAG CGGTGCCAAGGATCTCGGCAGCGCGGTCAAGGAATTCAAGAAAGGCATGCACGACGACGACAAGCCGGCCGGCAAGCTCG GCGACGACTCCCGCACTGCCGAGCAGGCGCGTGAGGCGCAGGCCGAACGCGACCGCGACGCGCGCTGA
Upstream 100 bases:
>100_bases CACCGAATCACTGGACGGTAAACGCTAAAGCACTGTCATCCCCCTGCGCGGTGCGCTGGGGTATCCTGGGTCTTCCTTTT TTTGAGCAAGCGAGCAGATC
Downstream 100 bases:
>100_bases TCCGGAGCGGCGTCGGTGTTTGACATAGGTGTTGGCGAACTGACGCTCATTGCGGTCGTCGCCCTAGTGGTGCTCGGTCC TGAGCGTTTGCCCAAGGCGG
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MGGFSIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPAGKLGDDSRTAEQAREAQAERDRDAR
Sequences:
>Translated_75_residues MGGFSIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPAGKLGDDSRTAEQAREAQAERDRDAR >Mature_74_residues GGFSIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPAGKLGDDSRTAEQAREAQAERDRDAR
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=74, Percent_Identity=45.945945945946, Blast_Score=65, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_XANAC (Q8PEX2)
Other databases:
- EMBL: AE008923 - RefSeq: NP_644517.1 - GeneID: 1158289 - GenomeReviews: AE008923_GR - KEGG: xac:XAC4218 - HOGENOM: HBG751935 - OMA: DNSKAND - ProtClustDB: PRK04561 - BioCyc: XAXO190486:XAC4218-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 8298; Mature: 8166
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xfd9dffc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGFSIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPAGKLGDDSRTA CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH EQAREAQAERDRDAR HHHHHHHHHHCCCCH >Mature Secondary Structure GGFSIWHWLIVLVIVLLVFGTKRLTSGAKDLGSAVKEFKKGMHDDDKPAGKLGDDSRTA CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH EQAREAQAERDRDAR HHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12024217