| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625786
Identifier: 84625786
GI number: 84625786
Start: 4654999
End: 4655928
Strand: Reverse
Name: 84625786
Synonym: XOO_4129
Alternate gene names: NA
Gene position: 4655928-4654999 (Counterclockwise)
Preceding gene: 84625789
Following gene: 84625785
Centisome position: 94.25
GC content: 65.48
Gene sequence:
>930_bases ATGAAATCTGGATCAAGCGCGAGAGCAGCGGCCCTGTACGCATCTTCTTCGGCGAAGCGGCGCAGGAAGCGCTGGACCAC GGCGAAGAGCAAGATCAAGCGCGTGGTCAAGCCGAACGTGTTCGGCACTGCCGGCAAGGCCGGTCCACTGCAGTGCGGAA CTGAGTTCCTGACCGCGCCGTTGGCCGTAAGCGGGGATGATTGGTTGAGCGACGACAGCGTGTTCGAGCCATGGAAGGGC GAAGCCGGCGGTTTCGAGACGGTGAGCTACTACGCACGCGCCGGCCACGCCACGCTAGCGGCAAAGCGCGATTTCGAACT GGTCCCCACCGCTGCGAGTCGCAGCACGCTGACGGTGCTTTATCGCAACAAACCGCTGCCCAAGGTGGAAGTGACGGTGA TCGACCCGCAGAAGTGGCAGAAGACGCCGACCTCCGATGCCAAGGGCCAGGTGACCCTGCCCAAGCTGCGCGCCGGCCGC CACATCCTGGTCGCCACCAACAAGGAACCGGTGAGCCGCGAGATCGCCGGCAAGCAGGTGTCGATGGTGCATCACATCAG CACGCTGACGTTCCTGGCCAAACAAGCGTGGTCGATATTGCTCCCGCGCAATCATCGACCGGGCGTGGCCGTTGCCAAAT CGCGGCAGGAGCGAACCGTCAGTGGCGCTTCCGGCGTCACGCGCGCGCGCCGATTGCGTGTGCTAACCACGCCGGCTTGG CAACTGCGCGCTGCGGCATGTCGCCTGCTCCAACTGATCCGCGCGCGCAGGGGGCTTGATGTCCAGCGCATCGTCCTTGC CGCAGCCCTGGTTCAAGCGCCCCTGGCTCGTGGTGCTTGCGCGCACGCTGGCGGCGATCTTCGGCGGCCATGCGCTCGCC AGCGCCACCAATCCGTTGCTGGCGCTGGTATTGCCGACGCCACGCAGTGA
Upstream 100 bases:
>100_bases GGTTTTGGTTCGCCAGGCCCGCCCGAGGAGTCGCCGCGATGAAATCCTTCTCTGTTGTCCTGCCTGGCCTTGGCCAGGAT CAGTTTGTCCGCCCAGGCCC
Downstream 100 bases:
>100_bases AGCGGTGTTGACCAGCATGCTGGTCGGCATCGTGGTGTACGCGTGCGCGCCGCTGTGGGCGTTCGCCACTGCCAGCGTGT GGCGTGCGTGGGCCGGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKSGSSARAAALYASSSAKRRRKRWTTAKSKIKRVVKPNVFGTAGKAGPLQCGTEFLTAPLAVSGDDWLSDDSVFEPWKG EAGGFETVSYYARAGHATLAAKRDFELVPTAASRSTLTVLYRNKPLPKVEVTVIDPQKWQKTPTSDAKGQVTLPKLRAGR HILVATNKEPVSREIAGKQVSMVHHISTLTFLAKQAWSILLPRNHRPGVAVAKSRQERTVSGASGVTRARRLRVLTTPAW QLRAAACRLLQLIRARRGLDVQRIVLAAALVQAPLARGACAHAGGDLRRPCARQRHQSVAGAGIADATQ
Sequences:
>Translated_309_residues MKSGSSARAAALYASSSAKRRRKRWTTAKSKIKRVVKPNVFGTAGKAGPLQCGTEFLTAPLAVSGDDWLSDDSVFEPWKG EAGGFETVSYYARAGHATLAAKRDFELVPTAASRSTLTVLYRNKPLPKVEVTVIDPQKWQKTPTSDAKGQVTLPKLRAGR HILVATNKEPVSREIAGKQVSMVHHISTLTFLAKQAWSILLPRNHRPGVAVAKSRQERTVSGASGVTRARRLRVLTTPAW QLRAAACRLLQLIRARRGLDVQRIVLAAALVQAPLARGACAHAGGDLRRPCARQRHQSVAGAGIADATQ >Mature_309_residues MKSGSSARAAALYASSSAKRRRKRWTTAKSKIKRVVKPNVFGTAGKAGPLQCGTEFLTAPLAVSGDDWLSDDSVFEPWKG EAGGFETVSYYARAGHATLAAKRDFELVPTAASRSTLTVLYRNKPLPKVEVTVIDPQKWQKTPTSDAKGQVTLPKLRAGR HILVATNKEPVSREIAGKQVSMVHHISTLTFLAKQAWSILLPRNHRPGVAVAKSRQERTVSGASGVTRARRLRVLTTPAW QLRAAACRLLQLIRARRGLDVQRIVLAAALVQAPLARGACAHAGGDLRRPCARQRHQSVAGAGIADATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33386; Mature: 33386
Theoretical pI: Translated: 11.84; Mature: 11.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSGSSARAAALYASSSAKRRRKRWTTAKSKIKRVVKPNVFGTAGKAGPLQCGTEFLTAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHCC LAVSGDDWLSDDSVFEPWKGEAGGFETVSYYARAGHATLAAKRDFELVPTAASRSTLTVL EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEECCCCCCCEEEEE YRNKPLPKVEVTVIDPQKWQKTPTSDAKGQVTLPKLRAGRHILVATNKEPVSREIAGKQV EECCCCCEEEEEEECCHHHCCCCCCCCCCCEECHHHCCCCEEEEECCCCCHHHHHCCCHH SMVHHISTLTFLAKQAWSILLPRNHRPGVAVAKSRQERTVSGASGVTRARRLRVLTTPAW HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHCHHHHHCCCCCHHHHHHEEEEEECCHH QLRAAACRLLQLIRARRGLDVQRIVLAAALVQAPLARGACAHAGGDLRRPCARQRHQSVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHH GAGIADATQ CCCCCCCCC >Mature Secondary Structure MKSGSSARAAALYASSSAKRRRKRWTTAKSKIKRVVKPNVFGTAGKAGPLQCGTEFLTAP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCHHHHHCC LAVSGDDWLSDDSVFEPWKGEAGGFETVSYYARAGHATLAAKRDFELVPTAASRSTLTVL EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEECCCCCCCEEEEE YRNKPLPKVEVTVIDPQKWQKTPTSDAKGQVTLPKLRAGRHILVATNKEPVSREIAGKQV EECCCCCEEEEEEECCHHHCCCCCCCCCCCEECHHHCCCCEEEEECCCCCHHHHHCCCHH SMVHHISTLTFLAKQAWSILLPRNHRPGVAVAKSRQERTVSGASGVTRARRLRVLTTPAW HHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHCHHHHHCCCCCHHHHHHEEEEEECCHH QLRAAACRLLQLIRARRGLDVQRIVLAAALVQAPLARGACAHAGGDLRRPCARQRHQSVA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHH GAGIADATQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA