| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625775
Identifier: 84625775
GI number: 84625775
Start: 4642331
End: 4643026
Strand: Reverse
Name: 84625775
Synonym: XOO_4118
Alternate gene names: NA
Gene position: 4643026-4642331 (Counterclockwise)
Preceding gene: 84625777
Following gene: 84625774
Centisome position: 93.98
GC content: 61.35
Gene sequence:
>696_bases ATGCATACCCTAACTGCTGAGAGGGTGTTGCACTTGGAGATTGAGTCTAAGCTGATCCAGGCCTGGGCCGGGCACAAGAG TTTCGTGCGCAAGGATGGCGATGACAATGGCGACGGCACGGACTTCCGCGGCACGTCTCGGAGCAATGAAACGCACGCCT CCACGACCGATCCGCACGCGCGTCTGTACCGCAAGGGCAAGACCGCCAGTGAGTTGCGTTACATGGGCCATACGCTGGCC GACAATCGCCACGGACTGATCGCCAATGCACGGGTGACCCATGCCGATGGTCACGCCGAGCGTGAAGCGGCCAAGGCCAT GATCGGTGACGCCCGCCAGGCGAACCCGGACGGTGCACTGACGCTGGGCGCGGACAAGGGGGACGACGCGGCCGAATTCG TCGAGGCATTGAAGGAAATCGGAGTTGCCCCGCATATCGCGCAGAACACCAGCAATCGTCGCTCGGCGGTTCCGGATGAG GTGGCTGCACGCGTTGGCTATGCGATCTCGCAGACCAAGCGGAAACTGATTGAACAAGGCTTTGGCTGGGCCAAGCTGAT CGGCACCATTGGCCAAGTGATGGTGCGGGGCCTGGAGAAGGTGGATCAGGTGTTCATGTTGAACATGACCGCCTACAACC TGGTACGCATGCGTACCCTGGGACAGATGTGCCTGCAGGCCGGGGAAACGGCATGA
Upstream 100 bases:
>100_bases CTAAAATCCTGGAAATCGCGCGCACACTTTGACCGCGCCCCCTCTCGATCTGGAGCATTGCGCGCTCTTCCGCACTGAGG TGTTGATAGCTTTTTGACAT
Downstream 100 bases:
>100_bases AAAGGGCAAAAATCAGCTCAAATCGGCTCAAATCAGGCAATCAAGGTCATGCGCCGGTGACTTCATGGTCAATTTTTCAC CACTTCTGAGGTGCGAAGAG
Product: ISXoo14 transposase
Products: NA
Alternate protein names: Transposase; Transposase Is4 Family Protein; IS4 Family Transposase; Transposase Or Inactivated Derivative; ISGsu3 Transposase; ISMca1 Transposase; ISGsu2 Transposase; Transposase For Insertion Sequence NGRIS-8b
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHARLYRKGKTASELRYMGHTLA DNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGALTLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDE VAARVGYAISQTKRKLIEQGFGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA
Sequences:
>Translated_231_residues MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHARLYRKGKTASELRYMGHTLA DNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGALTLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDE VAARVGYAISQTKRKLIEQGFGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA >Mature_231_residues MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHARLYRKGKTASELRYMGHTLA DNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGALTLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDE VAARVGYAISQTKRKLIEQGFGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25174; Mature: 25174
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHA CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RLYRKGKTASELRYMGHTLADNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGAL HHHHCCCCHHHHHHHHHHHCCCCCCEEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCE TLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDEVAARVGYAISQTKRKLIEQG EECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC FGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHA CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RLYRKGKTASELRYMGHTLADNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGAL HHHHCCCCHHHHHHHHHHHCCCCCCEEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCE TLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDEVAARVGYAISQTKRKLIEQG EECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC FGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA