Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84625775

Identifier: 84625775

GI number: 84625775

Start: 4642331

End: 4643026

Strand: Reverse

Name: 84625775

Synonym: XOO_4118

Alternate gene names: NA

Gene position: 4643026-4642331 (Counterclockwise)

Preceding gene: 84625777

Following gene: 84625774

Centisome position: 93.98

GC content: 61.35

Gene sequence:

>696_bases
ATGCATACCCTAACTGCTGAGAGGGTGTTGCACTTGGAGATTGAGTCTAAGCTGATCCAGGCCTGGGCCGGGCACAAGAG
TTTCGTGCGCAAGGATGGCGATGACAATGGCGACGGCACGGACTTCCGCGGCACGTCTCGGAGCAATGAAACGCACGCCT
CCACGACCGATCCGCACGCGCGTCTGTACCGCAAGGGCAAGACCGCCAGTGAGTTGCGTTACATGGGCCATACGCTGGCC
GACAATCGCCACGGACTGATCGCCAATGCACGGGTGACCCATGCCGATGGTCACGCCGAGCGTGAAGCGGCCAAGGCCAT
GATCGGTGACGCCCGCCAGGCGAACCCGGACGGTGCACTGACGCTGGGCGCGGACAAGGGGGACGACGCGGCCGAATTCG
TCGAGGCATTGAAGGAAATCGGAGTTGCCCCGCATATCGCGCAGAACACCAGCAATCGTCGCTCGGCGGTTCCGGATGAG
GTGGCTGCACGCGTTGGCTATGCGATCTCGCAGACCAAGCGGAAACTGATTGAACAAGGCTTTGGCTGGGCCAAGCTGAT
CGGCACCATTGGCCAAGTGATGGTGCGGGGCCTGGAGAAGGTGGATCAGGTGTTCATGTTGAACATGACCGCCTACAACC
TGGTACGCATGCGTACCCTGGGACAGATGTGCCTGCAGGCCGGGGAAACGGCATGA

Upstream 100 bases:

>100_bases
CTAAAATCCTGGAAATCGCGCGCACACTTTGACCGCGCCCCCTCTCGATCTGGAGCATTGCGCGCTCTTCCGCACTGAGG
TGTTGATAGCTTTTTGACAT

Downstream 100 bases:

>100_bases
AAAGGGCAAAAATCAGCTCAAATCGGCTCAAATCAGGCAATCAAGGTCATGCGCCGGTGACTTCATGGTCAATTTTTCAC
CACTTCTGAGGTGCGAAGAG

Product: ISXoo14 transposase

Products: NA

Alternate protein names: Transposase; Transposase Is4 Family Protein; IS4 Family Transposase; Transposase Or Inactivated Derivative; ISGsu3 Transposase; ISMca1 Transposase; ISGsu2 Transposase; Transposase For Insertion Sequence NGRIS-8b

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHARLYRKGKTASELRYMGHTLA
DNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGALTLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDE
VAARVGYAISQTKRKLIEQGFGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA

Sequences:

>Translated_231_residues
MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHARLYRKGKTASELRYMGHTLA
DNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGALTLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDE
VAARVGYAISQTKRKLIEQGFGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA
>Mature_231_residues
MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHARLYRKGKTASELRYMGHTLA
DNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGALTLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDE
VAARVGYAISQTKRKLIEQGFGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25174; Mature: 25174

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHA
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
RLYRKGKTASELRYMGHTLADNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGAL
HHHHCCCCHHHHHHHHHHHCCCCCCEEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCE
TLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDEVAARVGYAISQTKRKLIEQG
EECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
FGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHTLTAERVLHLEIESKLIQAWAGHKSFVRKDGDDNGDGTDFRGTSRSNETHASTTDPHA
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
RLYRKGKTASELRYMGHTLADNRHGLIANARVTHADGHAEREAAKAMIGDARQANPDGAL
HHHHCCCCHHHHHHHHHHHCCCCCCEEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCE
TLGADKGDDAAEFVEALKEIGVAPHIAQNTSNRRSAVPDEVAARVGYAISQTKRKLIEQG
EECCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
FGWAKLIGTIGQVMVRGLEKVDQVFMLNMTAYNLVRMRTLGQMCLQAGETA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA