| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625726
Identifier: 84625726
GI number: 84625726
Start: 4591082
End: 4591828
Strand: Reverse
Name: 84625726
Synonym: XOO_4069
Alternate gene names: NA
Gene position: 4591828-4591082 (Counterclockwise)
Preceding gene: 84625727
Following gene: 84625725
Centisome position: 92.95
GC content: 66.4
Gene sequence:
>747_bases ATGTCGAAGCCAACAAGACCGTCTGATCTGCCGACTGCGCCATCCCCCGACGCACCTGCATGGGTGCTGGGCATGGGCGT TCTGCTGGCGGTGGCGTATTCGCCGTTGGCGCATTGGGCCAATGCCAGTCACCGCCCGGAGGTGGCCGCCATCGCCGGTG GTTTGCTGGTGCTGATGGTCTTGATCGAACCGATGGTTGCGCGCCGGGCCTGGGCCTGGGCGCTGGCACTGCTGCTGCTC GCCGGATTGGGCGTGCTGTGGCATTCGCCGTACGCGATGGTGGTGCTGGCGGCGCCGCCGGTGGTGTTTACCGGTTGGGT CGCCTGGTTCTTCGGGCGCAGCCTGCGCCACGGCCGCACGCCGCTGATCACGCGCATTGTGGAAGGCCTGTACGGCCAGG CCGGCATGCCGGTCACGCCCGAACAACGCCGCTACACGCGCCGTCTCACGCTGGCCTGGGCATTGCTGCTGTGCGGCCTG ACCCTGGCCAATCTGGTGCTCGGCCTGTGCGCCGAACCCAGCGGCGTGCTGACGCAGTTGGGCTATGCCTCGCCGCTGCC GATCAGCGATGCGCGCGCCTCGTTGTTCGCCAATCTGCTCTGCTATGGCGTGATTGGCGGTTTCTTCATTGGGGAATATC TATTGCGCGGCCGCTGGTTTCCACAGCGTCCCTATCGTAATCTGCCAGACTTCTTGCGTCAGATGGCGCGGCTCGGGCCG GACTTCTGGCGCGATCTGCTGCGCTGA
Upstream 100 bases:
>100_bases GAACTGGCGCTGGCGATCAGCAAGCGCTACGGCTTCCAGCTGCGTTCGGACAACGACGAGAACCGTCGCATCTTCGCGTC GCTGCGCGCATTGTCGGCGC
Downstream 100 bases:
>100_bases GTGCGTGGCCAGGGGTAGCGACGTACGTGCATACTTTCGGGGACAAGACAAAGATGCCGTTGGCAAGGATGCCGTCGCGC CTGGCGTGGGCTGTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSKPTRPSDLPTAPSPDAPAWVLGMGVLLAVAYSPLAHWANASHRPEVAAIAGGLLVLMVLIEPMVARRAWAWALALLLL AGLGVLWHSPYAMVVLAAPPVVFTGWVAWFFGRSLRHGRTPLITRIVEGLYGQAGMPVTPEQRRYTRRLTLAWALLLCGL TLANLVLGLCAEPSGVLTQLGYASPLPISDARASLFANLLCYGVIGGFFIGEYLLRGRWFPQRPYRNLPDFLRQMARLGP DFWRDLLR
Sequences:
>Translated_248_residues MSKPTRPSDLPTAPSPDAPAWVLGMGVLLAVAYSPLAHWANASHRPEVAAIAGGLLVLMVLIEPMVARRAWAWALALLLL AGLGVLWHSPYAMVVLAAPPVVFTGWVAWFFGRSLRHGRTPLITRIVEGLYGQAGMPVTPEQRRYTRRLTLAWALLLCGL TLANLVLGLCAEPSGVLTQLGYASPLPISDARASLFANLLCYGVIGGFFIGEYLLRGRWFPQRPYRNLPDFLRQMARLGP DFWRDLLR >Mature_247_residues SKPTRPSDLPTAPSPDAPAWVLGMGVLLAVAYSPLAHWANASHRPEVAAIAGGLLVLMVLIEPMVARRAWAWALALLLLA GLGVLWHSPYAMVVLAAPPVVFTGWVAWFFGRSLRHGRTPLITRIVEGLYGQAGMPVTPEQRRYTRRLTLAWALLLCGLT LANLVLGLCAEPSGVLTQLGYASPLPISDARASLFANLLCYGVIGGFFIGEYLLRGRWFPQRPYRNLPDFLRQMARLGPD FWRDLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27264; Mature: 27132
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPTRPSDLPTAPSPDAPAWVLGMGVLLAVAYSPLAHWANASHRPEVAAIAGGLLVLMV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LIEPMVARRAWAWALALLLLAGLGVLWHSPYAMVVLAAPPVVFTGWVAWFFGRSLRHGRT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHCCCC PLITRIVEGLYGQAGMPVTPEQRRYTRRLTLAWALLLCGLTLANLVLGLCAEPSGVLTQL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GYASPLPISDARASLFANLLCYGVIGGFFIGEYLLRGRWFPQRPYRNLPDFLRQMARLGP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCH DFWRDLLR HHHHHHHC >Mature Secondary Structure SKPTRPSDLPTAPSPDAPAWVLGMGVLLAVAYSPLAHWANASHRPEVAAIAGGLLVLMV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH LIEPMVARRAWAWALALLLLAGLGVLWHSPYAMVVLAAPPVVFTGWVAWFFGRSLRHGRT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHHHHHCCCC PLITRIVEGLYGQAGMPVTPEQRRYTRRLTLAWALLLCGLTLANLVLGLCAEPSGVLTQL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GYASPLPISDARASLFANLLCYGVIGGFFIGEYLLRGRWFPQRPYRNLPDFLRQMARLGP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCH DFWRDLLR HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA