| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625709
Identifier: 84625709
GI number: 84625709
Start: 4569990
End: 4570832
Strand: Reverse
Name: 84625709
Synonym: XOO_4052
Alternate gene names: NA
Gene position: 4570832-4569990 (Counterclockwise)
Preceding gene: 84625710
Following gene: 84625708
Centisome position: 92.52
GC content: 64.18
Gene sequence:
>843_bases ATGCATCCACCAGATCTCAAACACCTGATCAGTGCCGCGCCGCGCGTGATGGTGGTCGATGGCTCCAAGCTGGTGCGCAA GCTGATCGCCGACGTGCTCAAGCGCGACCTGCCCAACGTGCAGGTGATCGGCTGTTCCAGCATCGCTGAAGCGCGTGAGG TACTGGAAGCGGGCGCAGTGGATCTGGTGACCACCTCGCTGTTGCTGCCCGATGGCGATGGCCTGACCCTGGCGCGCAGC GTGCGCGAAACCGCCGGGCAGGCCTATGTGCCGGTAATCGTGGTCTCCGGCGATGCGCAGCAGCATCTGGTGGAGCGCCG CTTCACCGAGTACGTCACCGATTATTTCGACAAGGCGCTGGGCCATGAAGCCCTGGCCACCTTCATCCGCGGCTACGTGC AGCCCGAACCGGTGGTGGGGGCGATCGTGCTCTACATCGAAGACAGCCGTGTGGTGGCCGAGGCGACCAAGCGCATGCTC GAGCGCCAGAGCCTGAAGGTAGTGCACGTGCTCACCGCCGAAGATGCGTTTGCACTGCTCACCGCCGAATCGCTGGGTCG CACCGAGCGCCGCATCGACATGGTGCTGACCGATGTGACCCTGAAAGGCGAGCTCAACGGCCGCGACGTGGTCGAGCGCA TCCGCATCGATTTCGCCTACGGCAAGCGCCGCCTGCCGGTGCTGGTGATGACCGGCGATACCAACCCGCGCAATCAGTCC GAATTGCTGCGCGCCGGTGCCAACGATCTGGTGCAAAAACCGATCGAAGAGCGCCTGCTGGTGACCAAGGTGCTGTTCCA GCTGCGCCTGGCACGTCTGGAGGATCAGGCGGTCACGCTATGA
Upstream 100 bases:
>100_bases TGGTGCTAGTCGGCACACTCGTGCTGGGATGGTTGGGCGCCTGGCTGGTGACCGGCCATTTCCTTCGCCAGACCCGCCCC ACCGAGACCTGAGACCTGCC
Downstream 100 bases:
>100_bases CCGAAGTGGAAGCGCGTATCCAGCTGGAACCGTCGTGGAAGGCAAAGGTTGGCGACTGGTTGCTGTGCTCTCAGATGCAG GAGCTGTCTGCCTTCCTGCG
Product: response regulator protein
Products: NA
Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Response Regulator Receiver Protein; GAF Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain Protein; Two-Component System Regulatory Protein; Response Regulator; Signal Transduction Response Regulator; Diguanylate Cyclase; Two-Component Response Regulator Transcriptional Regulator; Response Regulator Protein; Two-Component System Sensor Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAVDLVTTSLLLPDGDGLTLARS VRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRML ERQSLKVVHVLTAEDAFALLTAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL
Sequences:
>Translated_280_residues MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAVDLVTTSLLLPDGDGLTLARS VRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRML ERQSLKVVHVLTAEDAFALLTAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL >Mature_280_residues MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAVDLVTTSLLLPDGDGLTLARS VRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRML ERQSLKVVHVLTAEDAFALLTAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30993; Mature: 30993
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAV CCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCH DLVTTSLLLPDGDGLTLARSVRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKAL HHHHHHEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH GHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRMLERQSLKVVHVLTAEDAFALL CHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHH TAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS HHHHHCCHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAV CCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCH DLVTTSLLLPDGDGLTLARSVRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKAL HHHHHHEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH GHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRMLERQSLKVVHVLTAEDAFALL CHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHH TAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS HHHHHCCHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA