Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84625709

Identifier: 84625709

GI number: 84625709

Start: 4569990

End: 4570832

Strand: Reverse

Name: 84625709

Synonym: XOO_4052

Alternate gene names: NA

Gene position: 4570832-4569990 (Counterclockwise)

Preceding gene: 84625710

Following gene: 84625708

Centisome position: 92.52

GC content: 64.18

Gene sequence:

>843_bases
ATGCATCCACCAGATCTCAAACACCTGATCAGTGCCGCGCCGCGCGTGATGGTGGTCGATGGCTCCAAGCTGGTGCGCAA
GCTGATCGCCGACGTGCTCAAGCGCGACCTGCCCAACGTGCAGGTGATCGGCTGTTCCAGCATCGCTGAAGCGCGTGAGG
TACTGGAAGCGGGCGCAGTGGATCTGGTGACCACCTCGCTGTTGCTGCCCGATGGCGATGGCCTGACCCTGGCGCGCAGC
GTGCGCGAAACCGCCGGGCAGGCCTATGTGCCGGTAATCGTGGTCTCCGGCGATGCGCAGCAGCATCTGGTGGAGCGCCG
CTTCACCGAGTACGTCACCGATTATTTCGACAAGGCGCTGGGCCATGAAGCCCTGGCCACCTTCATCCGCGGCTACGTGC
AGCCCGAACCGGTGGTGGGGGCGATCGTGCTCTACATCGAAGACAGCCGTGTGGTGGCCGAGGCGACCAAGCGCATGCTC
GAGCGCCAGAGCCTGAAGGTAGTGCACGTGCTCACCGCCGAAGATGCGTTTGCACTGCTCACCGCCGAATCGCTGGGTCG
CACCGAGCGCCGCATCGACATGGTGCTGACCGATGTGACCCTGAAAGGCGAGCTCAACGGCCGCGACGTGGTCGAGCGCA
TCCGCATCGATTTCGCCTACGGCAAGCGCCGCCTGCCGGTGCTGGTGATGACCGGCGATACCAACCCGCGCAATCAGTCC
GAATTGCTGCGCGCCGGTGCCAACGATCTGGTGCAAAAACCGATCGAAGAGCGCCTGCTGGTGACCAAGGTGCTGTTCCA
GCTGCGCCTGGCACGTCTGGAGGATCAGGCGGTCACGCTATGA

Upstream 100 bases:

>100_bases
TGGTGCTAGTCGGCACACTCGTGCTGGGATGGTTGGGCGCCTGGCTGGTGACCGGCCATTTCCTTCGCCAGACCCGCCCC
ACCGAGACCTGAGACCTGCC

Downstream 100 bases:

>100_bases
CCGAAGTGGAAGCGCGTATCCAGCTGGAACCGTCGTGGAAGGCAAAGGTTGGCGACTGGTTGCTGTGCTCTCAGATGCAG
GAGCTGTCTGCCTTCCTGCG

Product: response regulator protein

Products: NA

Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Response Regulator Receiver Protein; GAF Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain Protein; Two-Component System Regulatory Protein; Response Regulator; Signal Transduction Response Regulator; Diguanylate Cyclase; Two-Component Response Regulator Transcriptional Regulator; Response Regulator Protein; Two-Component System Sensor Protein

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAVDLVTTSLLLPDGDGLTLARS
VRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRML
ERQSLKVVHVLTAEDAFALLTAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS
ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL

Sequences:

>Translated_280_residues
MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAVDLVTTSLLLPDGDGLTLARS
VRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRML
ERQSLKVVHVLTAEDAFALLTAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS
ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL
>Mature_280_residues
MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAVDLVTTSLLLPDGDGLTLARS
VRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKALGHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRML
ERQSLKVVHVLTAEDAFALLTAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS
ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30993; Mature: 30993

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAV
CCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCH
DLVTTSLLLPDGDGLTLARSVRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKAL
HHHHHHEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
GHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRMLERQSLKVVHVLTAEDAFALL
CHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHH
TAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS
HHHHHCCHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MHPPDLKHLISAAPRVMVVDGSKLVRKLIADVLKRDLPNVQVIGCSSIAEAREVLEAGAV
CCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCH
DLVTTSLLLPDGDGLTLARSVRETAGQAYVPVIVVSGDAQQHLVERRFTEYVTDYFDKAL
HHHHHHEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
GHEALATFIRGYVQPEPVVGAIVLYIEDSRVVAEATKRMLERQSLKVVHVLTAEDAFALL
CHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCEEEEEEECCCHHHHH
TAESLGRTERRIDMVLTDVTLKGELNGRDVVERIRIDFAYGKRRLPVLVMTGDTNPRNQS
HHHHHCCHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHH
ELLRAGANDLVQKPIEERLLVTKVLFQLRLARLEDQAVTL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA