Click here to switch to the map view.

The map label for this gene is 84625610

Identifier: 84625610

GI number: 84625610

Start: 4452051

End: 4453235

Strand: Reverse

Name: 84625610

Synonym: XOO_3953

Alternate gene names: NA

Gene position: 4453235-4452051 (Counterclockwise)

Preceding gene: 84625611

Following gene: 84625608

Centisome position: 90.14

GC content: 61.43

Gene sequence:

>1185_bases
ATGCTGGACGAACTGACGTCAGGCTGCAAGACGCCACAGGACGTGGAGAAGCTGTTTTCGCAAATGTTGCAGCACATGAT
CAATCGCTCGTTGGAGGCGGAGATGCAAGCCCATGTGGGCCATGCGCCGCATGGGCGCTCAGGCGGCAACGTGCGCAATG
GCAAGAGCCGCAAGACGGTGCAAAGCGCGTTTGGCGAGTTGCAGATCGAGACCCCGCGCGACCGCGCGGGCACGTTCGCG
CCACAGTTGGTGAAGAAGCGCCAGGTGCGGCTGGCGGGGATGGAGGAGAAGATTCTAGCGTTGTACGCGCGCGGCATGAC
CACGCGCGACATCGAGTCTGCGCTGGTGGACGTGTATGGGGTGGAGATATCGCATGCGTTGATCGCACAGGTGACCGACG
CGGTGCTGGAGGAGGCGCGGGCATGGCAATCGAGGCCGCTGGAGCCGATCTATCCGATCGTGTGGCTGGACGGCATCGTG
GTGAAGGTGCAGCACAACAAGCAGGTCATCAACAAGGCCGCGCACGTGGTGCTGGGGGTCAACCTGCGCGGGGAGAAGGA
AGTGCTTGGCCTGTGGTTGGCTGAACACGAGGGCGCCAAATACTGGCTGTCGGTGTTGACCGAACTGCGTCATCGCGGCG
TGCGCGACATCTACATCGCCTGCATGGATGGCTTGAAGGGCCTGCCCGAAGCGGTGCAAGCGGTGTTTCCGCAGACGCTC
ACGCAACTGTGCATTGTGCATTTGGTGCGGGCCAGCCTGCGCTACGTCAACGCAGGCGACAGCAAGGCGGTTGTGGCTGC
GCTCAAGCGCATCTATCAGTCGGCCACGGCGGAAGAAGCGGCGGCGGAACTGGAGGCGCTGGACACGCAGTGGGGCGACA
AATACCGTGCGGTGGTCCGCTTGTGGCGGGGCAACTGGGACAACATCATCCCGTTCTTGCAGTTCGTGCCGCAGATCCGC
AAGGTGATCTACACCACCAATGCCATCGAATCGTTGAACATGGTCATGCGCAAGCTCACCCGCAACCGGCGTATTTTCCC
CAACGACGATTCGGCGCTCAAATCGTTGTTTTTGGCCGTGCGCGAGGCATCGAAGAACTGGCGGTCCATCCATCACTGGA
AACCGGCTCTGCAAAGCTTCCAGGTGATGTTCGGCGAAGAACGCGTGCCGATGAATGCGCTATGA

Upstream 100 bases:

>100_bases
TGGCGGATCTGCGAGTCTGTAAATTGAACTGTGTAACTGCCCTTTGACAAGCGACTGGCCCGGACCGGAGAGGAGCAGGC
AAGCGGAACTGGATAAGACG

Downstream 100 bases:

>100_bases
AAAACCTGGTTACACAGTTGGCTTGACAGACCCGGATCTGCCGCCCAAGACCTCATCACGCACGTCGCCGCGATAACCCT
GACTCATCGCAACGATGTAA

Product: IS1113 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSAFGELQIETPRDRAGTFA
PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHALIAQVTDAVLEEARAWQSRPLEPIYPIVWLDGIV
VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAKYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL
TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFLQFVPQIR
KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL

Sequences:

>Translated_394_residues
MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSAFGELQIETPRDRAGTFA
PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHALIAQVTDAVLEEARAWQSRPLEPIYPIVWLDGIV
VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAKYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL
TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFLQFVPQIR
KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL
>Mature_394_residues
MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTVQSAFGELQIETPRDRAGTFA
PQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYGVEISHALIAQVTDAVLEEARAWQSRPLEPIYPIVWLDGIV
VKVQHNKQVINKAAHVVLGVNLRGEKEVLGLWLAEHEGAKYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL
TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVRLWRGNWDNIIPFLQFVPQIR
KVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAVREASKNWRSIHHWKPALQSFQVMFGEERVPMNAL

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 44496; Mature: 44496

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTV
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
QSAFGELQIETPRDRAGTFAPQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYG
HHHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VEISHALIAQVTDAVLEEARAWQSRPLEPIYPIVWLDGIVVKVQHNKQVINKAAHVVLGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCEEEEEECCHHHHHHHHHHEEEC
NLRGEKEVLGLWLAEHEGAKYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LWRGNWDNIIPFLQFVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
REASKNWRSIHHWKPALQSFQVMFGEERVPMNAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLDELTSGCKTPQDVEKLFSQMLQHMINRSLEAEMQAHVGHAPHGRSGGNVRNGKSRKTV
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
QSAFGELQIETPRDRAGTFAPQLVKKRQVRLAGMEEKILALYARGMTTRDIESALVDVYG
HHHHCCEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
VEISHALIAQVTDAVLEEARAWQSRPLEPIYPIVWLDGIVVKVQHNKQVINKAAHVVLGV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCEEEEEECCHHHHHHHHHHEEEC
NLRGEKEVLGLWLAEHEGAKYWLSVLTELRHRGVRDIYIACMDGLKGLPEAVQAVFPQTL
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
TQLCIVHLVRASLRYVNAGDSKAVVAALKRIYQSATAEEAAAELEALDTQWGDKYRAVVR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LWRGNWDNIIPFLQFVPQIRKVIYTTNAIESLNMVMRKLTRNRRIFPNDDSALKSLFLAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
REASKNWRSIHHWKPALQSFQVMFGEERVPMNAL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]