| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625604
Identifier: 84625604
GI number: 84625604
Start: 4446118
End: 4446351
Strand: Reverse
Name: 84625604
Synonym: XOO_3947
Alternate gene names: NA
Gene position: 4446351-4446118 (Counterclockwise)
Preceding gene: 84625605
Following gene: 84625600
Centisome position: 90.0
GC content: 63.25
Gene sequence:
>234_bases TTGCTCAACACGCTGGCCACCTTCGCCAGTTGGCTGGCAGGACTGGAATGCGAAGCCACCGGTATCGCCCAGTGGCTATC TCCACGCAGCAGCACACGCAAACTCTACTCGACACTGCGCGTCGGCCGCGAGGCGCTGGTCAGGCGCTGGCCGATGGAAC CAGTCTCACGCTGGCTAGAACGCTTGCGCGCGCTGCCCGACGCAGTGCGCGAGCAGATGACATTGGTGCTTTAA
Upstream 100 bases:
>100_bases GCAGATCGAGCTGGCATTTCGTGATCTGAAGTCGCACCGCTACGGTCAGGCGATGGAAGACAGCTTGACCCGTCGCGGCG AGCGGTTGCAGATCCTGTGA
Downstream 100 bases:
>100_bases AAACGTGGGGATATCTAAGACGCAGACGGTATCGTTCCGATAGGTCAAGGCGGCTGGATGACATGGGCAACTCCATTTGG TAGTGAAGTCGCTCAGGTCA
Product: ISXoo8 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MLNTLATFASWLAGLECEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLERLRALPDAVREQMTLVL
Sequences:
>Translated_77_residues MLNTLATFASWLAGLECEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLERLRALPDAVREQMTLVL >Mature_77_residues MLNTLATFASWLAGLECEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLERLRALPDAVREQMTLVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8858; Mature: 8858
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTLATFASWLAGLECEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLE CCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RLRALPDAVREQMTLVL HHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNTLATFASWLAGLECEATGIAQWLSPRSSTRKLYSTLRVGREALVRRWPMEPVSRWLE CCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RLRALPDAVREQMTLVL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA