| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625599
Identifier: 84625599
GI number: 84625599
Start: 4439567
End: 4439791
Strand: Reverse
Name: 84625599
Synonym: XOO_3942
Alternate gene names: NA
Gene position: 4439791-4439567 (Counterclockwise)
Preceding gene: 84625600
Following gene: 84625595
Centisome position: 89.87
GC content: 67.56
Gene sequence:
>225_bases GTGCTCGACGAATCCGAGGCGCACCACCGCGCCGCGCTGGAGGGTGTCGGCGTTGCATTGGGGCGGGTGACGCGCGCACG CCCGTTGCGTGAGTCCGGCCAACTGGTGGCGTTGTCCACGCAACGCCTCAAGACCAGCTGGTCGCATTACCTGGTGTATC CACCGCGTTCCAGCACGCATGGCGGGTTTCTCGCGTTTCGCGCGTGGTTGCAGGCGCAGGCGTGA
Upstream 100 bases:
>100_bases CTCCACAGCGGCGTCCGGTTGTGCCAAGCGCTTGGCGAGCGCCACATCTGCAATGTGGCCGTGCTGAAACAGCAAGTCGG TAAAGCTGCGGTATGCCGTC
Downstream 100 bases:
>100_bases GAACACGCCGCGCATCGACGTCCCCCCATCCTGAGTAGCAGTCGGGTTTAGAGTCCGGGGGTGATGATCTCGCTATTGGC CAACTGCTGGGCATACGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: LysR Family Regulatory Protein
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MLDESEAHHRAALEGVGVALGRVTRARPLRESGQLVALSTQRLKTSWSHYLVYPPRSSTHGGFLAFRAWLQAQA
Sequences:
>Translated_74_residues MLDESEAHHRAALEGVGVALGRVTRARPLRESGQLVALSTQRLKTSWSHYLVYPPRSSTHGGFLAFRAWLQAQA >Mature_74_residues MLDESEAHHRAALEGVGVALGRVTRARPLRESGQLVALSTQRLKTSWSHYLVYPPRSSTHGGFLAFRAWLQAQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8198; Mature: 8198
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDESEAHHRAALEGVGVALGRVTRARPLRESGQLVALSTQRLKTSWSHYLVYPPRSSTH CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEECCCCCCC GGFLAFRAWLQAQA CCHHHHHHHHHCCC >Mature Secondary Structure MLDESEAHHRAALEGVGVALGRVTRARPLRESGQLVALSTQRLKTSWSHYLVYPPRSSTH CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCEEEECCCCCCC GGFLAFRAWLQAQA CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA