| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625226
Identifier: 84625226
GI number: 84625226
Start: 4033554
End: 4034228
Strand: Reverse
Name: 84625226
Synonym: XOO_3569
Alternate gene names: NA
Gene position: 4034228-4033554 (Counterclockwise)
Preceding gene: 84625227
Following gene: 84625220
Centisome position: 81.66
GC content: 66.22
Gene sequence:
>675_bases GTGGCTCCTGCTTGCCTGTGTGGCGGCCTGGTTTGCGCGCGCCCGTTTGCGCAGCGCGTGCTGGTGATCGGGTTGGTGGC CAGCACCGCGTATCTGGGCTGGTCGTTGATGGCCAAGGAACTGGTCGACCGCCAAGCCGATCGCGCCCTGGCCGCGATGG GGCTGGCCGATGCGCCGCGGTTCTCGGTACCGATGCCGCTCAACACTCTGCTATGGCGGGTGGTGGCGATGACGCCCAGT GGCTATGTCATGGGTGAGCGTTCGCTGGTGGCCGACACTGGCCCGATGCATTTCCGCGGATTTTCCAGCAATACCCAGGC GCTGGGCGAAGTGGCCGGGTTCGATTCGGTGCGCCGGCTGACCTGGTTCAATCGCGGCTTCATGCGCGCGCGTCTGGTCG ATGACGATCTGATGTTGAGCGATCTACGCATGGGCCTGGAGCCGGATTACAACTTCAATTTCGTCGTTGCCCATCGCGAG AATGGAAAGTGGCAGCCGATCGTGCCGCGGCAGGTGCAGGCGGCGTACCGCGCACCGGTGGCACGCGACCAGATCGGCGC GGTGCTGGCGCAAATGTGGCAGCGCATCTGGCACGAGCCACGCAGCACCGCGCTAACCGGCGACCTGCAAGACGCCGGCG CTCCGGCCGCTGTGCCCGCATCGGCAGCTCGATAG
Upstream 100 bases:
>100_bases TGGATGCGTTCACCGTCTACGGCACCCAACTGTGGTGGCCACTGCAGCCGCATCCGACGATGTGGTCGAGCGTGTTCATC ATCGATCCGGCGTACACCCT
Downstream 100 bases:
>100_bases ACCGTGGCGCGCGCCTGCACGAACGAGTAGAAGAACACCGCGTTCGGGTCGCTGTGCACCTGCGCCAGTTCCCGGCGCAT GCCATCCACGGTGGCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Membrane-Bound Metal-Dependent Hydrolase Family Protein; Membrane Bound Hydrolase; Membrane-Bound Metal-Dependent Hydrolase Family
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAPACLCGGLVCARPFAQRVLVIGLVASTAYLGWSLMAKELVDRQADRALAAMGLADAPRFSVPMPLNTLLWRVVAMTPS GYVMGERSLVADTGPMHFRGFSSNTQALGEVAGFDSVRRLTWFNRGFMRARLVDDDLMLSDLRMGLEPDYNFNFVVAHRE NGKWQPIVPRQVQAAYRAPVARDQIGAVLAQMWQRIWHEPRSTALTGDLQDAGAPAAVPASAAR
Sequences:
>Translated_224_residues MAPACLCGGLVCARPFAQRVLVIGLVASTAYLGWSLMAKELVDRQADRALAAMGLADAPRFSVPMPLNTLLWRVVAMTPS GYVMGERSLVADTGPMHFRGFSSNTQALGEVAGFDSVRRLTWFNRGFMRARLVDDDLMLSDLRMGLEPDYNFNFVVAHRE NGKWQPIVPRQVQAAYRAPVARDQIGAVLAQMWQRIWHEPRSTALTGDLQDAGAPAAVPASAAR >Mature_223_residues APACLCGGLVCARPFAQRVLVIGLVASTAYLGWSLMAKELVDRQADRALAAMGLADAPRFSVPMPLNTLLWRVVAMTPSG YVMGERSLVADTGPMHFRGFSSNTQALGEVAGFDSVRRLTWFNRGFMRARLVDDDLMLSDLRMGLEPDYNFNFVVAHREN GKWQPIVPRQVQAAYRAPVARDQIGAVLAQMWQRIWHEPRSTALTGDLQDAGAPAAVPASAAR
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24530; Mature: 24398
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPACLCGGLVCARPFAQRVLVIGLVASTAYLGWSLMAKELVDRQADRALAAMGLADAPR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FSVPMPLNTLLWRVVAMTPSGYVMGERSLVADTGPMHFRGFSSNTQALGEVAGFDSVRRL CCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEECCCCCHHHHHHHHCHHHHHHH TWFNRGFMRARLVDDDLMLSDLRMGLEPDYNFNFVVAHRENGKWQPIVPRQVQAAYRAPV HHHHCCHHEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC ARDQIGAVLAQMWQRIWHEPRSTALTGDLQDAGAPAAVPASAAR CHHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCCC >Mature Secondary Structure APACLCGGLVCARPFAQRVLVIGLVASTAYLGWSLMAKELVDRQADRALAAMGLADAPR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FSVPMPLNTLLWRVVAMTPSGYVMGERSLVADTGPMHFRGFSSNTQALGEVAGFDSVRRL CCCCCCHHHHHHHHHHCCCCCEEEECCCEEECCCCCEEECCCCCHHHHHHHHCHHHHHHH TWFNRGFMRARLVDDDLMLSDLRMGLEPDYNFNFVVAHRENGKWQPIVPRQVQAAYRAPV HHHHCCHHEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCC ARDQIGAVLAQMWQRIWHEPRSTALTGDLQDAGAPAAVPASAAR CHHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA