| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84625101
Identifier: 84625101
GI number: 84625101
Start: 3901510
End: 3902127
Strand: Reverse
Name: 84625101
Synonym: XOO_3444
Alternate gene names: NA
Gene position: 3902127-3901510 (Counterclockwise)
Preceding gene: 84625103
Following gene: 84625100
Centisome position: 78.99
GC content: 63.11
Gene sequence:
>618_bases TTGGTGTTGCGATCCAGAGTTGAAGCCGCCGTCAGAAAAAGCGGACCATGCGCTTGCAACGCTGCAGGACATCGCTGTCG ACGCCAAGATGGTGCGCGACACGGTCAATGCGCAAACGCCCGCAGCCGATGCATTCACTGCGCAGATGATCGCCACGGCG CCGCGCAAGGCATCCCAAAGAGCCAGGTATATGTCGCTGGTCACTCGCTGGGCGGCGCAGTGGCGGAAATCGAGGCTGCT GCACACGGCCTGCGTGGCGCCACCTTCAACGCATTCGGTGCTGCGGAAATGATCAATGGTTCACCGCGGCCGGGCTTCCA ACTCACCAATTCCCGTATGGCCGGCGACCTCGTGAGCGCAGCGAGTCCGCATGTCGGCGAGGTGGTGTCGCTGGCTAGCA AAGAGGATATCCAGAGCCTGCGCGCCGGTCGGTATCTGGATGCGCCGGCCGGGCCGGCGCCGCCCAACGCGTTGATCGCC ATGCGGCTGAGCGACCACGGTGGGCAGCTGCACTTCCACCGCACGAGTCCGGACAACATTCTGGAACCGCATCGCTTTCA GGAAACTTCGCAACGCTACGCCGATCACAAGGCCGGTATCGACCACTTCGGCAGATGA
Upstream 100 bases:
>100_bases GCGGTATCGTTCTGACAGGTCCAGGCGGCTGGATGACATGGGCAACTCCATTTGGTAGTGAAGTCGCTCAGGTCAGGTCG CCTGGATCACTTCACAACCG
Downstream 100 bases:
>100_bases TGTATCGCAAGGGCGCGCGGAACTCTCCGAATCGGTGCGCCAGATGCACGGCAACGGCGGCCAGGGCAAGTTATCCCCGA ATCTTCGGCGGCAATTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MVLRSRVEAAVRKSGPCACNAAGHRCRRQDGARHGQCANARSRCIHCADDRHGAAQGIPKSQVYVAGHSLGGAVAEIEAA AHGLRGATFNAFGAAEMINGSPRPGFQLTNSRMAGDLVSAASPHVGEVVSLASKEDIQSLRAGRYLDAPAGPAPPNALIA MRLSDHGGQLHFHRTSPDNILEPHRFQETSQRYADHKAGIDHFGR
Sequences:
>Translated_205_residues MVLRSRVEAAVRKSGPCACNAAGHRCRRQDGARHGQCANARSRCIHCADDRHGAAQGIPKSQVYVAGHSLGGAVAEIEAA AHGLRGATFNAFGAAEMINGSPRPGFQLTNSRMAGDLVSAASPHVGEVVSLASKEDIQSLRAGRYLDAPAGPAPPNALIA MRLSDHGGQLHFHRTSPDNILEPHRFQETSQRYADHKAGIDHFGR >Mature_205_residues MVLRSRVEAAVRKSGPCACNAAGHRCRRQDGARHGQCANARSRCIHCADDRHGAAQGIPKSQVYVAGHSLGGAVAEIEAA AHGLRGATFNAFGAAEMINGSPRPGFQLTNSRMAGDLVSAASPHVGEVVSLASKEDIQSLRAGRYLDAPAGPAPPNALIA MRLSDHGGQLHFHRTSPDNILEPHRFQETSQRYADHKAGIDHFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21724; Mature: 21724
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLRSRVEAAVRKSGPCACNAAGHRCRRQDGARHGQCANARSRCIHCADDRHGAAQGIPK CCCHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCCCHHCCCCC SQVYVAGHSLGGAVAEIEAAAHGLRGATFNAFGAAEMINGSPRPGFQLTNSRMAGDLVSA CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEECCCHHHHHHHHH ASPHVGEVVSLASKEDIQSLRAGRYLDAPAGPAPPNALIAMRLSDHGGQLHFHRTSPDNI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC LEPHRFQETSQRYADHKAGIDHFGR CCCHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MVLRSRVEAAVRKSGPCACNAAGHRCRRQDGARHGQCANARSRCIHCADDRHGAAQGIPK CCCHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCCCHHCCCCC SQVYVAGHSLGGAVAEIEAAAHGLRGATFNAFGAAEMINGSPRPGFQLTNSRMAGDLVSA CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEECCCHHHHHHHHH ASPHVGEVVSLASKEDIQSLRAGRYLDAPAGPAPPNALIAMRLSDHGGQLHFHRTSPDNI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC LEPHRFQETSQRYADHKAGIDHFGR CCCHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA