| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fusA [H]
Identifier: 84625047
GI number: 84625047
Start: 3845173
End: 3847290
Strand: Reverse
Name: fusA [H]
Synonym: XOO_3390
Alternate gene names: 84625047
Gene position: 3847290-3845173 (Counterclockwise)
Preceding gene: 84625048
Following gene: 84625046
Centisome position: 77.88
GC content: 61.0
Gene sequence:
>2118_bases GTGGCCCGCACCACCCCTATCGAGCGTTACCGCAACTTTGGCATCATGGCCCACATCGATGCCGGCAAAACCACCACTTC CGAACGCATCCTGTTCTACACCGGTGTGAGTCACAAGATCGGCGAAGTCCATGACGGCGCTGCAGTGATGGACTGGATGG AGCAGGAGCAGGAGCGTGGTATCACCATCACCTCCGCTGCGACCACTGCGTTCTGGTCGGGTATGGACAAGTCCATGCCG CAGCACCGCTTCAACATCATCGACACCCCCGGGCACGTCGACTTCACCATCGAAGTGGAGCGCTCCTTGCGCGTCCTCGA CGGTGCGGTGTTCGTGTTGTGCGCCGTCGGCGGCGTGCAGCCGCAGTCCGAGACCGTGTGGCGTCAGGCCAACAAGTATT CCGTGCCACGCATGGCCTTCGTCAACAAGATGGACCGTACCGGTGCCAACTTCGACAAGGTCGTCGAGCAGCTGAAGGCC CGTCTGGGTGCGTACGCCGTGCCGATGCAGGTGCCGATCGGCGCCGAAGACGGCTTCGAAGGCGTGGTCGACCTGCTGAA GATGAAGGCGATCCATTGGGACACCGCATCGCAGGGCACCACCTTCGAATATAGCGATATTCCGGCCGAGCTGGTCGATG TCGCGACCGATGCACGTTCGTTCATGGTCGAAGCGGCTGCCGAAGCGAGCGAAGACCTGATGGACAAGTACCTCAACGAA GGCGACCTGAGCGAGGAAGAGATCCTGAAGGGTCTGCGCGAGCGCACCTTGAAGGTGGAGATCGTGCCGGTGTTCTGTGG CTCGGCGTTCAAGAACAAGGGCGTGCAGGCCATGCTCGACGGCGTCGTGCACCTGTTGCCGTCGCCGGCCGACCGTCCGC CGGTCCAGGGTATCGACGAAGACGAGAAGGAAGACACGCGCGCTGCGACCGATACCGCGCCGTTCTCGGCGTTGGCGTTC AAGATCATGACCGACCCGTTCGTAGGCTCGCTGACGTTCTTCCGTGTCTATTCGGGCACGCTGAACTCTGGCGACCAGGT CTACAACCCGGTCAAGTCGAAGAAAGAGCGCGTGGGCCGCATCCTGCAGATGCACTCCAACAATCGTGAAGAAATCAAGG AAGTGCGCGCTGGTGACATCGCCGCTGCCGTGGGTCTGAAGGATGTCACCACCGGCGACACGCTGTGTGCGCAGGACAAG ATCATCACCCTGGAGCGCATGGTGTTTCCGGAGCCGGTGATCTCGATGGCGGTGGAGCCGAAGACCAAGTCGGACCAGGA AAAGATGGGCATGGCCCTCGGCCGTCTGGCGCAGGAAGATCCCTCCTTCCGCGTCAAGACCGACGAAGAATCCGGCCAGA CCATCATCTCGGGCATGGGCGAGTTGCACCTGGACATCATCGTCGACCGCATGCGTCGCGAGTTCAATGTCGAGGCCAAC GTCGGCAAGCCGCAGGTGGCTTACCGCGAAACGATCCGCAAGTCCGACGTCAAGTCCGACTACAAGCACGCCAAGCAGTC CGGCGGTAAGGGTCAGTACGGTCACGTCGTGATCGAGCTGTCGCCGATGACCGAGGAAGATCGCAAGAGCGACAACGTCA AGGACGATTTCCTCTTTATCAACGACATCACCGGCGGCATCATCCCGAAGGAATTTATCCCCTCGGTTGAAAAGGGTCTG CGCGAGACGATCACCAGTGGTCCGATCGCCGGCTTCCCGGTCGTGGGCGTGAAGGTCAAGCTGGTGTTCGGCTCGTACCA TGACGTCGACTCCTCGGAAATGGCGTTCAAGCTGGCAGCATCGATGGCGTTCAAGCAGGGCTTTGCGAAAGCCAGTCCGG TGTTGCTGGAGCCAATCATGAAGGTCGAAATCGTCAGCCCGGAGGATTACCTGGGCGACGTGATGGGCGACGTGAGCCGC CGTCGTGGCGTGTTGCAGGGTCAGGACGACAGCCCGTCGGGCAAGATCATCAACGCGATGATTCCGCTGGGTGAGATGTT CGGTTACGCGACTTCGCTGCGCTCGATGAGTCAGGGGCGTGCGACCTTCTCGATGGAATTCGACCACTACGAAGAGGCAC CGGCCAACATCGCCGACGCCGTCACCAAGAAGGGCTGA
Upstream 100 bases:
>100_bases TGTAGTGCTGTTTGCGGCGCATTTTGCGTCGCATCCAATCCGAAGGCCGCCGAAAGGCGGCGTTCGGCCATCCGAAATCC AAGAAATTGAGAGGCTCCCC
Downstream 100 bases:
>100_bases GTTCGTTCAGCCACTTCTCACAAATTTTTCCAATTAGAGGTAGTTAGTTATGGCAAAAGCTAAATTCGAGCGCACCAAGC CGCACGTGAACGTCGGCACC
Product: elongation factor G
Products: NA
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 705; Mature: 704
Protein sequence:
>705_residues MARTTPIERYRNFGIMAHIDAGKTTTSERILFYTGVSHKIGEVHDGAAVMDWMEQEQERGITITSAATTAFWSGMDKSMP QHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYSVPRMAFVNKMDRTGANFDKVVEQLKA RLGAYAVPMQVPIGAEDGFEGVVDLLKMKAIHWDTASQGTTFEYSDIPAELVDVATDARSFMVEAAAEASEDLMDKYLNE GDLSEEEILKGLRERTLKVEIVPVFCGSAFKNKGVQAMLDGVVHLLPSPADRPPVQGIDEDEKEDTRAATDTAPFSALAF KIMTDPFVGSLTFFRVYSGTLNSGDQVYNPVKSKKERVGRILQMHSNNREEIKEVRAGDIAAAVGLKDVTTGDTLCAQDK IITLERMVFPEPVISMAVEPKTKSDQEKMGMALGRLAQEDPSFRVKTDEESGQTIISGMGELHLDIIVDRMRREFNVEAN VGKPQVAYRETIRKSDVKSDYKHAKQSGGKGQYGHVVIELSPMTEEDRKSDNVKDDFLFINDITGGIIPKEFIPSVEKGL RETITSGPIAGFPVVGVKVKLVFGSYHDVDSSEMAFKLAASMAFKQGFAKASPVLLEPIMKVEIVSPEDYLGDVMGDVSR RRGVLQGQDDSPSGKIINAMIPLGEMFGYATSLRSMSQGRATFSMEFDHYEEAPANIADAVTKKG
Sequences:
>Translated_705_residues MARTTPIERYRNFGIMAHIDAGKTTTSERILFYTGVSHKIGEVHDGAAVMDWMEQEQERGITITSAATTAFWSGMDKSMP QHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYSVPRMAFVNKMDRTGANFDKVVEQLKA RLGAYAVPMQVPIGAEDGFEGVVDLLKMKAIHWDTASQGTTFEYSDIPAELVDVATDARSFMVEAAAEASEDLMDKYLNE GDLSEEEILKGLRERTLKVEIVPVFCGSAFKNKGVQAMLDGVVHLLPSPADRPPVQGIDEDEKEDTRAATDTAPFSALAF KIMTDPFVGSLTFFRVYSGTLNSGDQVYNPVKSKKERVGRILQMHSNNREEIKEVRAGDIAAAVGLKDVTTGDTLCAQDK IITLERMVFPEPVISMAVEPKTKSDQEKMGMALGRLAQEDPSFRVKTDEESGQTIISGMGELHLDIIVDRMRREFNVEAN VGKPQVAYRETIRKSDVKSDYKHAKQSGGKGQYGHVVIELSPMTEEDRKSDNVKDDFLFINDITGGIIPKEFIPSVEKGL RETITSGPIAGFPVVGVKVKLVFGSYHDVDSSEMAFKLAASMAFKQGFAKASPVLLEPIMKVEIVSPEDYLGDVMGDVSR RRGVLQGQDDSPSGKIINAMIPLGEMFGYATSLRSMSQGRATFSMEFDHYEEAPANIADAVTKKG >Mature_704_residues ARTTPIERYRNFGIMAHIDAGKTTTSERILFYTGVSHKIGEVHDGAAVMDWMEQEQERGITITSAATTAFWSGMDKSMPQ HRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQPQSETVWRQANKYSVPRMAFVNKMDRTGANFDKVVEQLKAR LGAYAVPMQVPIGAEDGFEGVVDLLKMKAIHWDTASQGTTFEYSDIPAELVDVATDARSFMVEAAAEASEDLMDKYLNEG DLSEEEILKGLRERTLKVEIVPVFCGSAFKNKGVQAMLDGVVHLLPSPADRPPVQGIDEDEKEDTRAATDTAPFSALAFK IMTDPFVGSLTFFRVYSGTLNSGDQVYNPVKSKKERVGRILQMHSNNREEIKEVRAGDIAAAVGLKDVTTGDTLCAQDKI ITLERMVFPEPVISMAVEPKTKSDQEKMGMALGRLAQEDPSFRVKTDEESGQTIISGMGELHLDIIVDRMRREFNVEANV GKPQVAYRETIRKSDVKSDYKHAKQSGGKGQYGHVVIELSPMTEEDRKSDNVKDDFLFINDITGGIIPKEFIPSVEKGLR ETITSGPIAGFPVVGVKVKLVFGSYHDVDSSEMAFKLAASMAFKQGFAKASPVLLEPIMKVEIVSPEDYLGDVMGDVSRR RGVLQGQDDSPSGKIINAMIPLGEMFGYATSLRSMSQGRATFSMEFDHYEEAPANIADAVTKKG
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=710, Percent_Identity=44.2253521126761, Blast_Score=586, Evalue=1e-167, Organism=Homo sapiens, GI19923640, Length=722, Percent_Identity=38.5041551246537, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI25306283, Length=457, Percent_Identity=41.1378555798687, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI25306287, Length=297, Percent_Identity=48.1481481481481, Blast_Score=262, Evalue=1e-69, Organism=Homo sapiens, GI157426893, Length=154, Percent_Identity=36.3636363636364, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI4503483, Length=425, Percent_Identity=27.0588235294118, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI94966754, Length=166, Percent_Identity=33.7349397590361, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=37.5, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=37.5, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=37.5, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1789738, Length=703, Percent_Identity=71.1237553342816, Blast_Score=1030, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=513, Percent_Identity=27.0955165692008, Blast_Score=161, Evalue=1e-40, Organism=Escherichia coli, GI48994988, Length=182, Percent_Identity=36.8131868131868, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1788922, Length=179, Percent_Identity=36.3128491620112, Blast_Score=100, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17533571, Length=702, Percent_Identity=41.1680911680912, Blast_Score=520, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17556745, Length=721, Percent_Identity=29.4036061026352, Blast_Score=311, Evalue=5e-85, Organism=Caenorhabditis elegans, GI17552882, Length=799, Percent_Identity=23.0287859824781, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17506493, Length=427, Percent_Identity=27.4004683840749, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557151, Length=163, Percent_Identity=38.6503067484663, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=34.0136054421769, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=34.0136054421769, Blast_Score=78, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=686, Percent_Identity=41.9825072886297, Blast_Score=543, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6322359, Length=792, Percent_Identity=32.3232323232323, Blast_Score=385, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6324707, Length=818, Percent_Identity=26.161369193154, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6320593, Length=818, Percent_Identity=26.161369193154, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323320, Length=153, Percent_Identity=35.2941176470588, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324166, Length=175, Percent_Identity=32.5714285714286, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24582462, Length=711, Percent_Identity=41.6315049226442, Blast_Score=568, Evalue=1e-162, Organism=Drosophila melanogaster, GI221458488, Length=717, Percent_Identity=32.4965132496513, Blast_Score=370, Evalue=1e-102, Organism=Drosophila melanogaster, GI78706572, Length=203, Percent_Identity=33.4975369458128, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI24585711, Length=426, Percent_Identity=26.9953051643192, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585713, Length=426, Percent_Identity=26.9953051643192, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24585709, Length=426, Percent_Identity=26.9953051643192, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI28574573, Length=212, Percent_Identity=30.188679245283, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 77609; Mature: 77478
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTPIERYRNFGIMAHIDAGKTTTSERILFYTGVSHKIGEVHDGAAVMDWMEQEQERG CCCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC ITITSAATTAFWSGMDKSMPQHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQ EEEEEHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCC PQSETVWRQANKYSVPRMAFVNKMDRTGANFDKVVEQLKARLGAYAVPMQVPIGAEDGFE CCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCEEECCCCCCCHH GVVDLLKMKAIHWDTASQGTTFEYSDIPAELVDVATDARSFMVEAAAEASEDLMDKYLNE HHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDLSEEEILKGLRERTLKVEIVPVFCGSAFKNKGVQAMLDGVVHLLPSPADRPPVQGIDE CCCCHHHHHHHHHHCCEEEEEEEEECCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DEKEDTRAATDTAPFSALAFKIMTDPFVGSLTFFRVYSGTLNSGDQVYNPVKSKKERVGR CCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHEEHEECCCCCCCHHHHHHHHHHHHHHHH ILQMHSNNREEIKEVRAGDIAAAVGLKDVTTGDTLCAQDKIITLERMVFPEPVISMAVEP HHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEHHHHHCCCHHHHHEECC KTKSDQEKMGMALGRLAQEDPSFRVKTDEESGQTIISGMGELHLDIIVDRMRREFNVEAN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCC VGKPQVAYRETIRKSDVKSDYKHAKQSGGKGQYGHVVIELSPMTEEDRKSDNVKDDFLFI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCCEEEE NDITGGIIPKEFIPSVEKGLRETITSGPIAGFPVVGVKVKLVFGSYHDVDSSEMAFKLAA ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHH SMAFKQGFAKASPVLLEPIMKVEIVSPEDYLGDVMGDVSRRRGVLQGQDDSPSGKIINAM HHHHHHCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEH IPLGEMFGYATSLRSMSQGRATFSMEFDHYEEAPANIADAVTKKG HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHCCC >Mature Secondary Structure ARTTPIERYRNFGIMAHIDAGKTTTSERILFYTGVSHKIGEVHDGAAVMDWMEQEQERG CCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC ITITSAATTAFWSGMDKSMPQHRFNIIDTPGHVDFTIEVERSLRVLDGAVFVLCAVGGVQ EEEEEHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCC PQSETVWRQANKYSVPRMAFVNKMDRTGANFDKVVEQLKARLGAYAVPMQVPIGAEDGFE CCHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEECCEEECCCCCCCHH GVVDLLKMKAIHWDTASQGTTFEYSDIPAELVDVATDARSFMVEAAAEASEDLMDKYLNE HHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDLSEEEILKGLRERTLKVEIVPVFCGSAFKNKGVQAMLDGVVHLLPSPADRPPVQGIDE CCCCHHHHHHHHHHCCEEEEEEEEECCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC DEKEDTRAATDTAPFSALAFKIMTDPFVGSLTFFRVYSGTLNSGDQVYNPVKSKKERVGR CCHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHEEHEECCCCCCCHHHHHHHHHHHHHHHH ILQMHSNNREEIKEVRAGDIAAAVGLKDVTTGDTLCAQDKIITLERMVFPEPVISMAVEP HHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEHHHHHCCCHHHHHEECC KTKSDQEKMGMALGRLAQEDPSFRVKTDEESGQTIISGMGELHLDIIVDRMRREFNVEAN CCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCC VGKPQVAYRETIRKSDVKSDYKHAKQSGGKGQYGHVVIELSPMTEEDRKSDNVKDDFLFI CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCCCCCCCEEEE NDITGGIIPKEFIPSVEKGLRETITSGPIAGFPVVGVKVKLVFGSYHDVDSSEMAFKLAA ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHH SMAFKQGFAKASPVLLEPIMKVEIVSPEDYLGDVMGDVSRRRGVLQGQDDSPSGKIINAM HHHHHHCCCCCCCHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEH IPLGEMFGYATSLRSMSQGRATFSMEFDHYEEAPANIADAVTKKG HHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]