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The map label for this gene is 84624971

Identifier: 84624971

GI number: 84624971

Start: 3774535

End: 3777351

Strand: Reverse

Name: 84624971

Synonym: XOO_3314

Alternate gene names: NA

Gene position: 3777351-3774535 (Counterclockwise)

Preceding gene: 84624972

Following gene: 84624970

Centisome position: 76.46

GC content: 72.63

Gene sequence:

>2817_bases
ATGGAAGCACTGAATGCATTGATGTTTCAGGGGGCCTTGCTGTCCGACAGCGGTCGCCTATACCGCTTGCAGCTGCCTGG
CGGGGATGTCCAGGTGGTGGAGCGCTGGAGCGGGTCGGAACGGCTGAGCGGCGGTTTTGAGTGGTGGGTGGACGTGCTGA
GCACGCAGGCGGGCTTGCCGCTGGAGGCGTGGCTGGGGCGGCGCGCGACGCTGTACAGCCGGCTGGCCGATGGCGATGAA
AGCCCGCGCACGGGGCTGATCCACGACGCGTACGCACTGGGCAGCGACGGCGGGCTGGCGCGCTACCGGGTAGGCTTGGT
GCCGTGGACGTGGTGGTTGTCGCAGGGCCGGCACAGCCGGGTATTCCAGGAACGCACGCTGGTGCAGATCGTGGAAGCGG
TGTTCGCCGACTATGCGCCGATGGCAAGCTGGCAGTGGAGCGAGGAGACGAGCGCGTTCCTGGCCCAGGCGCGGCCGCGC
AGCTACTGCGTGCAGTACCGCGAGAGCGACCTGGATTTCGTGCAGCGGCTGCTGGCCGAGGAAGGCCTGGGCTGGCGGCT
GCAGGAGGCGGCCCCGTCGCCCGGCGGGCACCAGCTGGTGGTGTTCGCCGACAGCGTCGCGCAACCGCAGGACCCCAGTT
CGGCGCAGGGCGGCGGGCTGCGCTACCACCGCAGCGACGCCACCGAGGCGGCCGACAGCGTGCTGGCGATCGGCGCCACC
CGGCGGCTGGGCAGCGGCCGGCTGACGGTGCTCAGCGAAGACTTCAAGACGCGTCAGGCGCGCAGCGCGCAGTTGCCGTT
GCACGGCGGCGGCAGGCAGTCGCTGCGCGAGGTGTACGAGCCGGTGGGGATGGACGCCTTCGCCAGCGCGCAGGCAGCAG
ACCGCTCTGCGGAGTTGATGGCGCAGGCGCACGAGGCGCAGTGGTCACCGTGGCAGGGCCGCAGCACGGTGCGCACGCTG
CGCGCCGGCACCTGGTTCACGCTGACCCAGTCACCGCAGCAGGGCCAGGCACCGCCGGCGCAGCTGTTGCTGACGCGGGT
GTGGCATGCGGGTATCAACAACTTGCCGGTGGACGTGCGCGCGGCGGTGCAGTCGCAGTTGGGGGCCGCGCCGGCGTGGC
CGGATGCCAGCGCGGTGGCCGCACGCAGCACCTGGGCGCAGGCCGAGGCGGTGGGCTACGGCAACGCCTTCGAGGCGGTG
GACCGGCAGCAGCCGTGGCGGCCGGTGCTGGCCGACGGCACCGGGGCGCGGCTGCACCCGCGGCCGACCGCGCCGGGCTA
CCAGAGCGCCATCGTGGTCGGTGCCGATGGCAGCACCGGCGGCAGCCAGGAGGTCCATGCCGACGCGCTGGGCCGGATCC
GGGTCAGGTTCCACTTCCAGCACGCCGCGTCGGCCCCGGCGGCGCAGGACAGCACGTGGCTGCGGGTGGCGCAGCGCTAC
GCCGGCCCGGGCGTGGGCAGCCAGTTCCTGCCGCGCATCGGCCAGGAAGTGCTGGTGGGCTTCCTGGAGGGGGACATCGA
CCGTCCGGTGGTGCTGGGTGCGCTGTACAACGGCAAGGGCGAAGCCGGCGTTCCCGCCACCCCCGGCGGCACCAGCGCCG
AGGCCGACACCGGCCTGTACGCCAAGGCCGGCGACGGTAGACCCAGCGCGCAGGGCAACCTGGCCGGCGGCCATGCCCCG
GCCTGGCACGGCGCCGGCGGCGGCGCGGACAACCACCGCAACGCCACCGCGCTGTGGGGCGTGCAATCCAAGGAATGGGG
CAGCGCTGGCCACAGCCGGCTGGTGTTCGACGACAGCGACCAGCAACTGCGCTTGCAGCTGGCCACGACCCAGGCAGCCA
CGCAACTGAACCTGGGGCACCTGATCCACCAGGCCGACAACTACCGCGGCAGCTTCCGCGGGGAAGGCTTCGAACTGCGC
ACCGACGCGTGGGGCGCGGTGCGTGCCAGCTCGGGGCTATGGCTGAGCAGCTACGGCCGCAGCGGCGGCCCGGCCGGCGA
GGCGACCCAGCCCAGCGCATTGCTGAGCCAGCTGCAGACGCTGGGCAAGACGTTCTCGCAGGCGGCGGGCACGCACCAGA
CGGTGAAGCTGGCCGCGCACGAAGGCGTGGGCCAGGCGAACCACTCCCAGCTGATCGCCGAGCAGGCACCGCTGCCGGCG
CTGCTGACCAGCGTGAAGACCACGGTGCCGGGCACGGCCTACGCCGACGCCAAGGGTGCGGCGGCCGAGCGCCGCGCCAG
CCCGGGCGACGACCGGGTGCCGCATACCGGCGATGCGCTGCTGGGCCTGGCCGCACCAGCGGGGATCGGCGTGGTGGCCG
GCCAGGGCCTGAGCTGGAGCGTGGGCGAGACGCTGACGCTGGCCAGCGGCGCGGGCAGCGAAGCGGCCATCGCCGGCGAC
GCCCGGCTGCACAGCGGCCAGGCAATCGGCGTGCTGGCCGCGGCGGTGGACGGCGGGCAAACGCAGGCCAACAGCCTGAG
CCTGGTCAGCGGCGAAGGCGCGCTGGACGTGCAGGCGCAGTCGGACGACGTGCGCGTGCAGTCGAAAGAAGGGCTGAAGC
TGATCAGCGCCAACGCCGACGTGGCACTGGCGGCGGGCAAGACCCTCCACCTGGCGGTGGCCGGCGGGGCCAGCGTGACC
ATCGAAGGCGGCAACATCACCGTCGCCTGCCCCGGCACCATCACCGTGCATGCGAGCAAGAAGTCGTTTGTGGGGCCGGT
GCAGCAGGCGTATCCGTTGCCGCAGTTTCCACGCAGCAGTTGCAAGAGCTGCATCCTGGATGCAGCGCGCCAAGGAACCC
CGGGAGTGCTGGTGTGA

Upstream 100 bases:

>100_bases
ACCGTCATGCCCGCCGCAGTATTCGTCTGTTAAATTCGCCGTCCAGGGCCAGGAAACGATGTTGCCCGGGGCGCGATGGC
CCGAGGACAGAGGTAGTGTG

Downstream 100 bases:

>100_bases
TGCGATATTACGCCGTGATCGACAGCGCTCAGCGTCCCCACTTCCATGAACGACTGGATCGCCTGGGCGCGACCTATTGC
TCCCTGTTCGACCAGCAGGC

Product: putative VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VgrG Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Rhs Element Vgr-Related Protein; Conserved Hypothethical Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; Fimbrial Operon Related Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 938; Mature: 938

Protein sequence:

>938_residues
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLPLEAWLGRRATLYSRLADGDE
SPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSRVFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPR
SYCVQYRESDLDFVQRLLAEEGLGWRLQEAAPSPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELMAQAHEAQWSPWQGRSTVRTL
RAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAV
DRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLYAKAGDGRPSAQGNLAGGHAP
AWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELR
TDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTLASGAGSEAAIAGD
ARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVT
IEGGNITVACPGTITVHASKKSFVGPVQQAYPLPQFPRSSCKSCILDAARQGTPGVLV

Sequences:

>Translated_938_residues
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLPLEAWLGRRATLYSRLADGDE
SPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSRVFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPR
SYCVQYRESDLDFVQRLLAEEGLGWRLQEAAPSPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELMAQAHEAQWSPWQGRSTVRTL
RAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAV
DRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLYAKAGDGRPSAQGNLAGGHAP
AWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELR
TDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTLASGAGSEAAIAGD
ARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVT
IEGGNITVACPGTITVHASKKSFVGPVQQAYPLPQFPRSSCKSCILDAARQGTPGVLV
>Mature_938_residues
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLPLEAWLGRRATLYSRLADGDE
SPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSRVFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPR
SYCVQYRESDLDFVQRLLAEEGLGWRLQEAAPSPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELMAQAHEAQWSPWQGRSTVRTL
RAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVRAAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAV
DRQQPWRPVLADGTGARLHPRPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLYAKAGDGRPSAQGNLAGGHAP
AWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSDQQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELR
TDAWGAVRASSGLWLSSYGRSGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWSVGETLTLASGAGSEAAIAGD
ARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQSDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVT
IEGGNITVACPGTITVHASKKSFVGPVQQAYPLPQFPRSSCKSCILDAARQGTPGVLV

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98160; Mature: 98160

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLP
CCHHHHHHHCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC
LEAWLGRRATLYSRLADGDESPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSR
HHHHHCCHHHHHHHHHCCCCCCCCCEEEHHHEECCCCCEEEEEEECCCHHHHHHCCCHHH
VFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
EGLGWRLQEAAPSPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
CCCCEEEHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHEEEEECH
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELM
HCCCCCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVR
HHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
AAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEECCCCCEECC
RPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
CCCCCCCCCEEEEECCCCCCCCCCCCHHHHCEEEEEEEEEHHCCCCCCCCHHHHHHHHHH
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
AKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC
QQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGR
CEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCC
SGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHH
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWS
HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCC
VGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQ
CCCEEEEECCCCCCCEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
SDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASK
CCCEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECCCEEEEEECC
KSFVGPVQQAYPLPQFPRSSCKSCILDAARQGTPGVLV
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEALNALMFQGALLSDSGRLYRLQLPGGDVQVVERWSGSERLSGGFEWWVDVLSTQAGLP
CCHHHHHHHCCEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCC
LEAWLGRRATLYSRLADGDESPRTGLIHDAYALGSDGGLARYRVGLVPWTWWLSQGRHSR
HHHHHCCHHHHHHHHHCCCCCCCCCEEEHHHEECCCCCEEEEEEECCCHHHHHHCCCHHH
VFQERTLVQIVEAVFADYAPMASWQWSEETSAFLAQARPRSYCVQYRESDLDFVQRLLAE
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
EGLGWRLQEAAPSPGGHQLVVFADSVAQPQDPSSAQGGGLRYHRSDATEAADSVLAIGAT
CCCCEEEHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHEEEEECH
RRLGSGRLTVLSEDFKTRQARSAQLPLHGGGRQSLREVYEPVGMDAFASAQAADRSAELM
HCCCCCEEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AQAHEAQWSPWQGRSTVRTLRAGTWFTLTQSPQQGQAPPAQLLLTRVWHAGINNLPVDVR
HHHHHCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH
AAVQSQLGAAPAWPDASAVAARSTWAQAEAVGYGNAFEAVDRQQPWRPVLADGTGARLHP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEECCCCCEECC
RPTAPGYQSAIVVGADGSTGGSQEVHADALGRIRVRFHFQHAASAPAAQDSTWLRVAQRY
CCCCCCCCCEEEEECCCCCCCCCCCCHHHHCEEEEEEEEEHHCCCCCCCCHHHHHHHHHH
AGPGVGSQFLPRIGQEVLVGFLEGDIDRPVVLGALYNGKGEAGVPATPGGTSAEADTGLY
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
AKAGDGRPSAQGNLAGGHAPAWHGAGGGADNHRNATALWGVQSKEWGSAGHSRLVFDDSD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCC
QQLRLQLATTQAATQLNLGHLIHQADNYRGSFRGEGFELRTDAWGAVRASSGLWLSSYGR
CEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCC
SGGPAGEATQPSALLSQLQTLGKTFSQAAGTHQTVKLAAHEGVGQANHSQLIAEQAPLPA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHH
LLTSVKTTVPGTAYADAKGAAAERRASPGDDRVPHTGDALLGLAAPAGIGVVAGQGLSWS
HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCC
VGETLTLASGAGSEAAIAGDARLHSGQAIGVLAAAVDGGQTQANSLSLVSGEGALDVQAQ
CCCEEEEECCCCCCCEEECCCEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCEEEEEC
SDDVRVQSKEGLKLISANADVALAAGKTLHLAVAGGASVTIEGGNITVACPGTITVHASK
CCCEEEECCCCEEEEECCCCEEEECCCEEEEEEECCCEEEEECCEEEEECCCEEEEEECC
KSFVGPVQQAYPLPQFPRSSCKSCILDAARQGTPGVLV
CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA