| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624920
Identifier: 84624920
GI number: 84624920
Start: 3705742
End: 3706734
Strand: Reverse
Name: 84624920
Synonym: XOO_3263
Alternate gene names: NA
Gene position: 3706734-3705742 (Counterclockwise)
Preceding gene: 84624921
Following gene: 84624919
Centisome position: 75.03
GC content: 59.01
Gene sequence:
>993_bases ATGGCACGGATGTGGATGGTGCGCGGTGAGGGCGGAAGCTTGTACGAAGCATTTCGCGAACAAGGCGTGGTTGCAGTGGG CTGGATTCAGCTCGCGGCTGAGGCCAAGCCAGGCATCGATCGCAAGCAGTTGATCGCGATCTATCAGGCTGCTGAGCCAT TGGCCAGACCTGGCACCGTCATTTCCGGCGCCTCGCAGGTATGGCGTTTCGTAAATGAAATTCAGCAAGACGATTGGGTC ATTACTTACTCGCCAGCGAATCGCCTCTACGCAGTTGGCACTGTGGCGGGGCAGGCGGAGTACTTCGCCGAGTCGGCCGA ATCAGGGATAGCGCTTGCGCGCAAGGTGCAATGGCTGCAGCAGGAGCTTCCCCGCGATCACCTGGGCATCTCCACCAAGA ATAGCCTTGGCTCCACACTGACTTTGTTTGAGGTGCCACCCAGTGCCGCCGACGAGATATTGGCGGTGCTCAAAGGCAAG CCGGTGCAGGAGCTCGAACAAGCGCTGGACGAAGCCGTTGCCGACCCTCTCGCAGGCATCGAATCCCAAGCGCTTGAGCG CATCAAGGATCTGGTCAGCGAGCTTGGCTGGAATGACATGCAACAACTTGTGGCCGGCATTCTGCGAGCGATGGGCTACA AGACTCAGGTTTCACCTCCCGGCTCGGACCGTGGGAAAGACATCGTTGCATCGCCCGACGGGTTTGGCTTCGAACATCCA CGTATTGTCGTGGAGGTCAAGCATCGTAAGGGGCAAATGGGCAGTCAGGACATTCGCAGCTTTCTTGGTGGGCGCCACAA GGATGATCGCGGTTTGTATGTCAGTACCGGCGGCTTCAGCAAGGATGCGCAGTACGAAGCCGATCGGGCGTCCATCCCAT TGGCGCTGTGGACGCTGGATCATGTGGTGCGCGCGCTGATCGAGCACTATGCGGCTACCGACGCCGAAACAAAACGCATT GTGCCGCTGAAACGGCTTTACTGGCCCGCCTGA
Upstream 100 bases:
>100_bases GTGCTTGCGCTCGCGGTGAGGCATCAGCGTGAATGTGACTGGTGCTAAGGTCTACGGCGAAGAACGTATAGAAAATTTTG AATTTAAAAAGAAGGTAGTG
Downstream 100 bases:
>100_bases AGCCAGAGGAAGAAAAAGTGACATCTACCGAACAAAAGATCGAGCGCTTCATCGCCGCCTTGGCTTCGCTTGGCGGCAGC GCGGGCAATCAACGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type II Restriction Endonuclease; Mrr Restriction Endonuclease; Restriction Endonuclease Protein; Restriction Endonuclease Family Protein; 5-Methylcytosine-Specific Restriction MRR; Mrr Restriction System Protein
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MARMWMVRGEGGSLYEAFREQGVVAVGWIQLAAEAKPGIDRKQLIAIYQAAEPLARPGTVISGASQVWRFVNEIQQDDWV ITYSPANRLYAVGTVAGQAEYFAESAESGIALARKVQWLQQELPRDHLGISTKNSLGSTLTLFEVPPSAADEILAVLKGK PVQELEQALDEAVADPLAGIESQALERIKDLVSELGWNDMQQLVAGILRAMGYKTQVSPPGSDRGKDIVASPDGFGFEHP RIVVEVKHRKGQMGSQDIRSFLGGRHKDDRGLYVSTGGFSKDAQYEADRASIPLALWTLDHVVRALIEHYAATDAETKRI VPLKRLYWPA
Sequences:
>Translated_330_residues MARMWMVRGEGGSLYEAFREQGVVAVGWIQLAAEAKPGIDRKQLIAIYQAAEPLARPGTVISGASQVWRFVNEIQQDDWV ITYSPANRLYAVGTVAGQAEYFAESAESGIALARKVQWLQQELPRDHLGISTKNSLGSTLTLFEVPPSAADEILAVLKGK PVQELEQALDEAVADPLAGIESQALERIKDLVSELGWNDMQQLVAGILRAMGYKTQVSPPGSDRGKDIVASPDGFGFEHP RIVVEVKHRKGQMGSQDIRSFLGGRHKDDRGLYVSTGGFSKDAQYEADRASIPLALWTLDHVVRALIEHYAATDAETKRI VPLKRLYWPA >Mature_329_residues ARMWMVRGEGGSLYEAFREQGVVAVGWIQLAAEAKPGIDRKQLIAIYQAAEPLARPGTVISGASQVWRFVNEIQQDDWVI TYSPANRLYAVGTVAGQAEYFAESAESGIALARKVQWLQQELPRDHLGISTKNSLGSTLTLFEVPPSAADEILAVLKGKP VQELEQALDEAVADPLAGIESQALERIKDLVSELGWNDMQQLVAGILRAMGYKTQVSPPGSDRGKDIVASPDGFGFEHPR IVVEVKHRKGQMGSQDIRSFLGGRHKDDRGLYVSTGGFSKDAQYEADRASIPLALWTLDHVVRALIEHYAATDAETKRIV PLKRLYWPA
Specific function: Unknown
COG id: COG4127
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36262; Mature: 36130
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMWMVRGEGGSLYEAFREQGVVAVGWIQLAAEAKPGIDRKQLIAIYQAAEPLARPGTV CCCEEEEECCCCHHHHHHHHCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHCHHCCCCCC ISGASQVWRFVNEIQQDDWVITYSPANRLYAVGTVAGQAEYFAESAESGIALARKVQWLQ CCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH QELPRDHLGISTKNSLGSTLTLFEVPPSAADEILAVLKGKPVQELEQALDEAVADPLAGI HHCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH ESQALERIKDLVSELGWNDMQQLVAGILRAMGYKTQVSPPGSDRGKDIVASPDGFGFEHP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCC RIVVEVKHRKGQMGSQDIRSFLGGRHKDDRGLYVSTGGFSKDAQYEADRASIPLALWTLD EEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH HVVRALIEHYAATDAETKRIVPLKRLYWPA HHHHHHHHHHHCCCCCCHHCCCHHHHCCCC >Mature Secondary Structure ARMWMVRGEGGSLYEAFREQGVVAVGWIQLAAEAKPGIDRKQLIAIYQAAEPLARPGTV CCEEEEECCCCHHHHHHHHCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHCHHCCCCCC ISGASQVWRFVNEIQQDDWVITYSPANRLYAVGTVAGQAEYFAESAESGIALARKVQWLQ CCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH QELPRDHLGISTKNSLGSTLTLFEVPPSAADEILAVLKGKPVQELEQALDEAVADPLAGI HHCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCH ESQALERIKDLVSELGWNDMQQLVAGILRAMGYKTQVSPPGSDRGKDIVASPDGFGFEHP HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCC RIVVEVKHRKGQMGSQDIRSFLGGRHKDDRGLYVSTGGFSKDAQYEADRASIPLALWTLD EEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH HVVRALIEHYAATDAETKRIVPLKRLYWPA HHHHHHHHHHHCCCCCCHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA