| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624918
Identifier: 84624918
GI number: 84624918
Start: 3703465
End: 3703899
Strand: Reverse
Name: 84624918
Synonym: XOO_3261
Alternate gene names: NA
Gene position: 3703899-3703465 (Counterclockwise)
Preceding gene: 84624919
Following gene: 84624917
Centisome position: 74.97
GC content: 57.01
Gene sequence:
>435_bases ATGATGAACGAGAAACTCGACCTCACAGCATTGCGCAATGCGGTGTCTTCGCTGGAAGACAGCTTGGGCGTGGTCAGCGA CAGCGCCTGGTTCGACCAGCAATCGAAGCAGGTGAAAAACACGCTGGTGGCAGGCGTCATCCAGAATTTCGAGTTCGTCT ATGAAATCGGCATCAAGATGCTCAAGCGCCAGATCGAGACCGAATCCGCCAGCCCGGAGGAGGTGGACGAAACCAACTTC CGCGAAGTGCTGCGCGTGGCTGCCGAAAAGGGCTTGATCGCCGACGTGGAGGCCTGGTTCAAGTATCGGCAGATGCGCAA CATCACCGCGCACACCTACGACCACGAAAAGGCGAAGAAGGTGTACCAGGGCACCCTGGACTTCATCGTCGATGCGCGCG ACTTGTTGCAAAAGCTGGAAGCACGCAATGTCTGA
Upstream 100 bases:
>100_bases CGCCTGGCAACGCTATGGCGGGAGCAGCAGCAGGAAGCGGCGAAGCTTGACGCAGCGATCGAGATGAATCTGAAGCACCT GGGGTTCTGACAGGAGAGAC
Downstream 100 bases:
>100_bases CACGCCCAATATCGACATACGGCCCGATCATTGGCAGATCGTGCGTGACATTCTGCGTAAGCACGTGCCGCAATATGCAG TATGGGCTTTCGGTTCGCGG
Product: nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MMNEKLDLTALRNAVSSLEDSLGVVSDSAWFDQQSKQVKNTLVAGVIQNFEFVYEIGIKMLKRQIETESASPEEVDETNF REVLRVAAEKGLIADVEAWFKYRQMRNITAHTYDHEKAKKVYQGTLDFIVDARDLLQKLEARNV
Sequences:
>Translated_144_residues MMNEKLDLTALRNAVSSLEDSLGVVSDSAWFDQQSKQVKNTLVAGVIQNFEFVYEIGIKMLKRQIETESASPEEVDETNF REVLRVAAEKGLIADVEAWFKYRQMRNITAHTYDHEKAKKVYQGTLDFIVDARDLLQKLEARNV >Mature_144_residues MMNEKLDLTALRNAVSSLEDSLGVVSDSAWFDQQSKQVKNTLVAGVIQNFEFVYEIGIKMLKRQIETESASPEEVDETNF REVLRVAAEKGLIADVEAWFKYRQMRNITAHTYDHEKAKKVYQGTLDFIVDARDLLQKLEARNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010235 [H]
Pfam domain/function: PF08780 NTase_sub_bind [H]
EC number: NA
Molecular weight: Translated: 16529; Mature: 16529
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNEKLDLTALRNAVSSLEDSLGVVSDSAWFDQQSKQVKNTLVAGVIQNFEFVYEIGIKM CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRQIETESASPEEVDETNFREVLRVAAEKGLIADVEAWFKYRQMRNITAHTYDHEKAKK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VYQGTLDFIVDARDLLQKLEARNV HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMNEKLDLTALRNAVSSLEDSLGVVSDSAWFDQQSKQVKNTLVAGVIQNFEFVYEIGIKM CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRQIETESASPEEVDETNFREVLRVAAEKGLIADVEAWFKYRQMRNITAHTYDHEKAKK HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH VYQGTLDFIVDARDLLQKLEARNV HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]