| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624913
Identifier: 84624913
GI number: 84624913
Start: 3698898
End: 3699644
Strand: Reverse
Name: 84624913
Synonym: XOO_3256
Alternate gene names: NA
Gene position: 3699644-3698898 (Counterclockwise)
Preceding gene: 84624914
Following gene: 84624912
Centisome position: 74.89
GC content: 56.49
Gene sequence:
>747_bases ATGAGTGTGGACTGGTATCCTGGTATCCGCGAAGCCTGTGGGTATTGGCGCGAAGCACCAATGTTGCAGCAGACCTTCGA GGCGCTGGAACGCACCCTGGATCAGGACAACGATGCGTGCATCGACTGCGCGAAATCCATCGTTGAAGTGTTCTGCCGGA TCATTGTGGGTGAACTGGATTCGCCGACTCAGCCCGTGAGGCCGAAGGCTACGGCGCCGGACTTCGGTGAGTGGGTCGGC GCCGCTGTGCGCGTGCTTAAGCTCGGTGAAAACCAAAACAGCAAATTTCTCAAGCTGGTCTCGCAGCACCATAAGTTGAC ATCAGCGTTGGGCGATCTACGGAACGAATCTGGGCCGGTCAGTCATGGGCGTGATGGATTTCTCGCCAAACTGTCCATTC ACCATCGCCGCTCGGCGGTCCTGTCAGCGGATGCACTGGTGATGTTTCTGCACCAAGCGTACCTGGAGGCGCAGCGAGAT CCGGTCAATTCGCGCGAGCCTTGGGAGCGGTTTGAGGAATTCAACCAATTAATTGACGCTTATGTCGGGCTTGAGTTGGT GATGGACAATGACGGCAATCCTGAGTTTCGGGTTCTTTTGCCTGGCAATGACTCCTTTCCTCTCAATGTTTCCGTCAGCC GTGTGCTCTACCAGCTTGACCGTGGTGCCTATATCGAAGCGTTGAACGCCGCACGTGATGCTCCTGCTCTTGTAGCGGAG CAGGATGTGGAAGGAGGGGAGCGCTGA
Upstream 100 bases:
>100_bases CTTCGCGCTCGCTTGCCACGCTGCGGGATGCTCTGCTACCTAAGCTGATTACAGGCGAATTGCGGGTACAAGATGTGGAG CGCCTCGTGGAGTCAGTTGC
Downstream 100 bases:
>100_bases TGGCCTGGGACTGGGCCGTGATTGGAACCGCTGTTGGTGGGTTTTCCACCATGATCTACACCGGATTCACTTATGCACTG CTGCGTGAGAACCGCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSVDWYPGIREACGYWREAPMLQQTFEALERTLDQDNDACIDCAKSIVEVFCRIIVGELDSPTQPVRPKATAPDFGEWVG AAVRVLKLGENQNSKFLKLVSQHHKLTSALGDLRNESGPVSHGRDGFLAKLSIHHRRSAVLSADALVMFLHQAYLEAQRD PVNSREPWERFEEFNQLIDAYVGLELVMDNDGNPEFRVLLPGNDSFPLNVSVSRVLYQLDRGAYIEALNAARDAPALVAE QDVEGGER
Sequences:
>Translated_248_residues MSVDWYPGIREACGYWREAPMLQQTFEALERTLDQDNDACIDCAKSIVEVFCRIIVGELDSPTQPVRPKATAPDFGEWVG AAVRVLKLGENQNSKFLKLVSQHHKLTSALGDLRNESGPVSHGRDGFLAKLSIHHRRSAVLSADALVMFLHQAYLEAQRD PVNSREPWERFEEFNQLIDAYVGLELVMDNDGNPEFRVLLPGNDSFPLNVSVSRVLYQLDRGAYIEALNAARDAPALVAE QDVEGGER >Mature_247_residues SVDWYPGIREACGYWREAPMLQQTFEALERTLDQDNDACIDCAKSIVEVFCRIIVGELDSPTQPVRPKATAPDFGEWVGA AVRVLKLGENQNSKFLKLVSQHHKLTSALGDLRNESGPVSHGRDGFLAKLSIHHRRSAVLSADALVMFLHQAYLEAQRDP VNSREPWERFEEFNQLIDAYVGLELVMDNDGNPEFRVLLPGNDSFPLNVSVSRVLYQLDRGAYIEALNAARDAPALVAEQ DVEGGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27737; Mature: 27605
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDWYPGIREACGYWREAPMLQQTFEALERTLDQDNDACIDCAKSIVEVFCRIIVGELD CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC SPTQPVRPKATAPDFGEWVGAAVRVLKLGENQNSKFLKLVSQHHKLTSALGDLRNESGPV CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC SHGRDGFLAKLSIHHRRSAVLSADALVMFLHQAYLEAQRDPVNSREPWERFEEFNQLIDA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YVGLELVMDNDGNPEFRVLLPGNDSFPLNVSVSRVLYQLDRGAYIEALNAARDAPALVAE HHCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH QDVEGGER CCCCCCCC >Mature Secondary Structure SVDWYPGIREACGYWREAPMLQQTFEALERTLDQDNDACIDCAKSIVEVFCRIIVGELD CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC SPTQPVRPKATAPDFGEWVGAAVRVLKLGENQNSKFLKLVSQHHKLTSALGDLRNESGPV CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC SHGRDGFLAKLSIHHRRSAVLSADALVMFLHQAYLEAQRDPVNSREPWERFEEFNQLIDA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH YVGLELVMDNDGNPEFRVLLPGNDSFPLNVSVSRVLYQLDRGAYIEALNAARDAPALVAE HHCEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH QDVEGGER CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA