| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624889
Identifier: 84624889
GI number: 84624889
Start: 3671268
End: 3672371
Strand: Reverse
Name: 84624889
Synonym: XOO_3233
Alternate gene names: NA
Gene position: 3672371-3671268 (Counterclockwise)
Preceding gene: 84624892
Following gene: 84624888
Centisome position: 74.34
GC content: 63.5
Gene sequence:
>1104_bases ATGGCGCGCTCACGCGCTGTGCGTGAGCGCCGCAAGGCCAGGCAACTGTCTGGCAGTGCAATCCTGCGCACTTCTCTGCA GCAGGCGTGTGCATCGCACAGCGACCGCACTGACGCCACCCTGAAAAAAACCGCACTTGCAGCACTGCCGATCAAGTGCA GCGCCGCCATACCGCGCGTCGTAACACCTTACACATCCCACTTTTCAACGCTGCACGGTCATGCGATCTGTGCTGCGCTT TGCCCTGGAATCACCGCAATGCACACCAACACCTCGCGCTCGTCTTTCCGCAAGACACCCGCATCGCTGCTCGCCGTCAT CGTTACTGCAGCGCTGAGCAGCCTCGCAGTTCAGGCGCATGCGCAAGACGCCACCGAAGCGGCGCTCTGCACCGATCGGC CGACCAAGGCCAATGCCACCTGCACCGTGCCGGCTGGCGACTGGCAGCTGGAAACCGACATCGGCAACTACACGCGCGAC AGTCAACCCGGCACACGCACGGAAACCTCCTACTTCACCAATCCCACGCTCAAGTACGGCGTCAGCGATCGCATCGATCT GCAGCTCAACTGGACGCCGCAGCTACAGGTCAAGACCACCGACCGCGCCACCGGCGAACGCAGCAGCCTGAGCGGCGGCG GCGATCTGTATCTGCGCATGAAGGCGCGCGTCTATGAGAGCGACACCGCAAGCGTGGCGCTGCTGCCGTTCGTCAAGGCA CCCACCGCACGTACCGGCCTGGGCAACGACACCTGGGAAGGCGGCTTGGCGCTGCCGGTCAACGTGGTGCTGCCCAGCAG CTTCTCGCTGACGTTTGGTCCGGAGCTGGATTGGTTGGCCGACAGCGATGGCAGCGGCAAGCATGTGGCCATCGTCAACC TGATCAATCTGGCGCGCCCGCTGACACCGAAGTTGTCGATGGCGGTGGAACTGTGGTCCTCGATCAACCGCGACCCTGCG CAGACCGTCAAGCAGTACTCGGCCGATATCGCGGCGACGTATCTGCTCAACCCGCTGTTGCAGCTGGATGTGGGCGCCAA TTTCGGCCTCAACGACCGCACACCCGACACGCAGGTGTACCTGGGCCTGTCGCACCGCTTCTAA
Upstream 100 bases:
>100_bases CTTTATGCTGTTCCTCCTTATCGTGCCGTCTCCCGCACGAACGGTGCGCCATGAGTGCCGCATGCCTGGACCGATCCTGA TTCCCACCACGCTGTAGACC
Downstream 100 bases:
>100_bases GAGCACCTGACAAAACGACTGCGCAGCCGTCAGGCGGGCGTGGCCGGTGCTCGGAATTGTCATGTACCACTCGTACACGG CGGTTCCTCCGCGCCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MARSRAVRERRKARQLSGSAILRTSLQQACASHSDRTDATLKKTALAALPIKCSAAIPRVVTPYTSHFSTLHGHAICAAL CPGITAMHTNTSRSSFRKTPASLLAVIVTAALSSLAVQAHAQDATEAALCTDRPTKANATCTVPAGDWQLETDIGNYTRD SQPGTRTETSYFTNPTLKYGVSDRIDLQLNWTPQLQVKTTDRATGERSSLSGGGDLYLRMKARVYESDTASVALLPFVKA PTARTGLGNDTWEGGLALPVNVVLPSSFSLTFGPELDWLADSDGSGKHVAIVNLINLARPLTPKLSMAVELWSSINRDPA QTVKQYSADIAATYLLNPLLQLDVGANFGLNDRTPDTQVYLGLSHRF
Sequences:
>Translated_367_residues MARSRAVRERRKARQLSGSAILRTSLQQACASHSDRTDATLKKTALAALPIKCSAAIPRVVTPYTSHFSTLHGHAICAAL CPGITAMHTNTSRSSFRKTPASLLAVIVTAALSSLAVQAHAQDATEAALCTDRPTKANATCTVPAGDWQLETDIGNYTRD SQPGTRTETSYFTNPTLKYGVSDRIDLQLNWTPQLQVKTTDRATGERSSLSGGGDLYLRMKARVYESDTASVALLPFVKA PTARTGLGNDTWEGGLALPVNVVLPSSFSLTFGPELDWLADSDGSGKHVAIVNLINLARPLTPKLSMAVELWSSINRDPA QTVKQYSADIAATYLLNPLLQLDVGANFGLNDRTPDTQVYLGLSHRF >Mature_366_residues ARSRAVRERRKARQLSGSAILRTSLQQACASHSDRTDATLKKTALAALPIKCSAAIPRVVTPYTSHFSTLHGHAICAALC PGITAMHTNTSRSSFRKTPASLLAVIVTAALSSLAVQAHAQDATEAALCTDRPTKANATCTVPAGDWQLETDIGNYTRDS QPGTRTETSYFTNPTLKYGVSDRIDLQLNWTPQLQVKTTDRATGERSSLSGGGDLYLRMKARVYESDTASVALLPFVKAP TARTGLGNDTWEGGLALPVNVVLPSSFSLTFGPELDWLADSDGSGKHVAIVNLINLARPLTPKLSMAVELWSSINRDPAQ TVKQYSADIAATYLLNPLLQLDVGANFGLNDRTPDTQVYLGLSHRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39467; Mature: 39336
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSRAVRERRKARQLSGSAILRTSLQQACASHSDRTDATLKKTALAALPIKCSAAIPRV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCC VTPYTSHFSTLHGHAICAALCPGITAMHTNTSRSSFRKTPASLLAVIVTAALSSLAVQAH CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH AQDATEAALCTDRPTKANATCTVPAGDWQLETDIGNYTRDSQPGTRTETSYFTNPTLKYG HCCCHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEC VSDRIDLQLNWTPQLQVKTTDRATGERSSLSGGGDLYLRMKARVYESDTASVALLPFVKA CCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECC PTARTGLGNDTWEGGLALPVNVVLPSSFSLTFGPELDWLADSDGSGKHVAIVNLINLARP CCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCEEEEEEHHHHHCC LTPKLSMAVELWSSINRDPAQTVKQYSADIAATYLLNPLLQLDVGANFGLNDRTPDTQVY CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEE LGLSHRF EEECCCC >Mature Secondary Structure ARSRAVRERRKARQLSGSAILRTSLQQACASHSDRTDATLKKTALAALPIKCSAAIPRV CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEECCCCCCCC VTPYTSHFSTLHGHAICAALCPGITAMHTNTSRSSFRKTPASLLAVIVTAALSSLAVQAH CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH AQDATEAALCTDRPTKANATCTVPAGDWQLETDIGNYTRDSQPGTRTETSYFTNPTLKYG HCCCHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEC VSDRIDLQLNWTPQLQVKTTDRATGERSSLSGGGDLYLRMKARVYESDTASVALLPFVKA CCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEECC PTARTGLGNDTWEGGLALPVNVVLPSSFSLTFGPELDWLADSDGSGKHVAIVNLINLARP CCCCCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCEEEEEEHHHHHCC LTPKLSMAVELWSSINRDPAQTVKQYSADIAATYLLNPLLQLDVGANFGLNDRTPDTQVY CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEE LGLSHRF EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA