Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84624811

Identifier: 84624811

GI number: 84624811

Start: 3576141

End: 3577364

Strand: Reverse

Name: 84624811

Synonym: XOO_3154

Alternate gene names: NA

Gene position: 3577364-3576141 (Counterclockwise)

Preceding gene: 84624813

Following gene: 84624810

Centisome position: 72.41

GC content: 62.91

Gene sequence:

>1224_bases
GTGCCAACCATGCGCGCCAGCGAAGTATTGCAGAAGTGCCTGTCTAACTCACTCTCCGGGATGCATGCATTACGCCAACG
CGCCTTGCTACGCGCGGTTGAAGCGCTGGTGCACGGAGGCCGGCTGACGCTGATCGACATCGCACGCGCGTGGCCCGGCG
CGAGGCGGGTACGTGCGCCCCTCAAGGCATGCGACCGCCTGCTGTGCAATCGCGCGTTGCAGGTCGAGCGATCAGCCATC
GAGCGGGACATGGCGCATTGGCTACTGCGCGGCGACCAGCCGGTGATCGTCATCGACTGGAGCGATTTGAAGCCGGACAA
GTCGTGGTGTCTGCTGCGCGCAGCCGTGCCGGTCGGTGGACGCACGCTCACCTTGCTGGATATGGTGGTTTCCGGGAAAC
AGCAGGGATCGCCAGGCGCGGAGAAACGCTTTTTGCAGCAGCTCAGGGCACTGATTCCAGACGATGTGCGTCCGATCCTG
GTCACGGATGCCGGATTCCGCACGCCATGGTTTCGCGCGGTGTCGGCGATGGGCTGGGATTGGGTCGGACGTCTGCGCGG
ACGTACGCAGGTCAAACCGCAAGACGTGCCCGATGATGCAGTGCAATGGATCGATAGCCGTCGCCTGCATGCGCTAGCGT
CCAACCGTGCACGCGAATTGCCACCGATGCAGGCCAATCGCAGCGATCCGCTCGATTGCCGTCTGGTGCTCTATGCCAAG
ACACCACAGGGACGTCAGCAACGCAATCGACGCTCACCCGCCAAAGTCTCGGGTGCATCATCCAGTTTGAAAGCCGCAGC
GCGTGAGCGTGAGCCGTGGTTGATCGTTGCCTCCCCACAGCTACACGCACCCAGCGCAAAGCAATTGGTCAACCTGTACG
CACGACGGATGCAGATCGAGCTGGCATTTCGTGATCTGAAGTCGCACCGCTACGGTCAGGCGATGGAAGACAGCCTGACC
CGTCGCGGCGAGCGGTTGCAGATCCTGTTGTTGCTCAACACGCTGGCCACCTTCGCCAGTTGGCTGGCGGGACTGGGATG
CGAAGCCACCGGTATCGCCCAGTGGCTATCTCCACGCAGCAGCACACGCAAACTCTACTCGACGCTGCGCGTCGGCCGCG
AGGCGCTGGTCAGGTGCTGGCCGATGGAACCAGTCTCACGCTGGCTAGAACGCTTGCGCGCGCTGCCCGACGCAGTGCGC
GAGCAGATGACATTGGTGCTTTAA

Upstream 100 bases:

>100_bases
TCCCCACATTTCTTCCTGCGAGATCAAGCACTTGTTGCATCAAGGCGTGGAAGAAGGCGCGCGCATGGGGCACGCTTCGA
GGTGACTAAGCCAGAGAAGA

Downstream 100 bases:

>100_bases
AAACGTGGGATATCTAATTCCACTGTGTTACAAATAATCGTACCTTTGTGCCACTATTGGAAGACCTTCAGGCCGCGCGG
GAGAGCTGTGTTGAATAGGA

Product: ISXoo8 transposase

Products: NA

Alternate protein names: ISxac1 Transposase; Transposase; Transposase For IS; IS10 Orf; ISCro2 Transposase; Transposase IS; ISXoo8 Transposase; IS4 Family Transposase; ISSfl3 ORF

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MPTMRASEVLQKCLSNSLSGMHALRQRALLRAVEALVHGGRLTLIDIARAWPGARRVRAPLKACDRLLCNRALQVERSAI
ERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPVGGRTLTLLDMVVSGKQQGSPGAEKRFLQQLRALIPDDVRPIL
VTDAGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAVQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAK
TPQGRQQRNRRSPAKVSGASSSLKAAAREREPWLIVASPQLHAPSAKQLVNLYARRMQIELAFRDLKSHRYGQAMEDSLT
RRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGREALVRCWPMEPVSRWLERLRALPDAVR
EQMTLVL

Sequences:

>Translated_407_residues
MPTMRASEVLQKCLSNSLSGMHALRQRALLRAVEALVHGGRLTLIDIARAWPGARRVRAPLKACDRLLCNRALQVERSAI
ERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPVGGRTLTLLDMVVSGKQQGSPGAEKRFLQQLRALIPDDVRPIL
VTDAGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAVQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAK
TPQGRQQRNRRSPAKVSGASSSLKAAAREREPWLIVASPQLHAPSAKQLVNLYARRMQIELAFRDLKSHRYGQAMEDSLT
RRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGREALVRCWPMEPVSRWLERLRALPDAVR
EQMTLVL
>Mature_406_residues
PTMRASEVLQKCLSNSLSGMHALRQRALLRAVEALVHGGRLTLIDIARAWPGARRVRAPLKACDRLLCNRALQVERSAIE
RDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPVGGRTLTLLDMVVSGKQQGSPGAEKRFLQQLRALIPDDVRPILV
TDAGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAVQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAKT
PQGRQQRNRRSPAKVSGASSSLKAAAREREPWLIVASPQLHAPSAKQLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTR
RGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGREALVRCWPMEPVSRWLERLRALPDAVRE
QMTLVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45928; Mature: 45797

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMRASEVLQKCLSNSLSGMHALRQRALLRAVEALVHGGRLTLIDIARAWPGARRVRAP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHH
LKACDRLLCNRALQVERSAIERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHEEEEEECCCCC
RTLTLLDMVVSGKQQGSPGAEKRFLQQLRALIPDDVRPILVTDAGFRTPWFRAVSAMGWD
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCHH
WVGRLRGRTQVKPQDVPDDAVQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAK
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
TPQGRQQRNRRSPAKVSGASSSLKAAAREREPWLIVASPQLHAPSAKQLVNLYARRMQIE
CCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
LAFRDLKSHRYGQAMEDSLTRRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRS
HHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH
STRKLYSTLRVGREALVRCWPMEPVSRWLERLRALPDAVREQMTLVL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTMRASEVLQKCLSNSLSGMHALRQRALLRAVEALVHGGRLTLIDIARAWPGARRVRAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHH
LKACDRLLCNRALQVERSAIERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPVGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHEEEEEECCCCC
RTLTLLDMVVSGKQQGSPGAEKRFLQQLRALIPDDVRPILVTDAGFRTPWFRAVSAMGWD
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCHH
WVGRLRGRTQVKPQDVPDDAVQWIDSRRLHALASNRARELPPMQANRSDPLDCRLVLYAK
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
TPQGRQQRNRRSPAKVSGASSSLKAAAREREPWLIVASPQLHAPSAKQLVNLYARRMQIE
CCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
LAFRDLKSHRYGQAMEDSLTRRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRS
HHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCH
STRKLYSTLRVGREALVRCWPMEPVSRWLERLRALPDAVREQMTLVL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA