Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84624610

Identifier: 84624610

GI number: 84624610

Start: 3337359

End: 3337736

Strand: Direct

Name: 84624610

Synonym: XOO_2953

Alternate gene names: NA

Gene position: 3337359-3337736 (Clockwise)

Preceding gene: 84624605

Following gene: 84624611

Centisome position: 67.55

GC content: 57.94

Gene sequence:

>378_bases
ATGCAATTCGTCGACTCTGTGGGTTGGCTTGCCAGCATCGTCCTGATCGCCACGTTGATCCGGCAGATCTACGAACAATG
GCGCTCAGACGCCGCGCAAAGCATCTCGCGCTGGTTGTTCCTCGCCCAGATCAGCGCCTCGGTATTGTTCGTCTTGTACC
GTTATCTCGTTGGCCATGCGGTGTTGATTGTCAGCAATGCACTGATGCTGCCGACAGGCCTCACCGGCTACGGAGTGCAG
CGACTCAAGTGCTGCAAGCTGGAGCGCACAGCTTGGATGCGGAGCGTGGATAACACCTGCAGGGTGGTTGCGATTGTCAG
CTTGTCTTTTTCGCTGGCCTCCGCGGTTTCGCCGATGCAGTTGCCGCTGGCTTCGTAA

Upstream 100 bases:

>100_bases
GCCCGCCTCACGCGTTGCACAACGCTTGAAGCTGCTCAAACAGGATGCAGCCGGTGCGCGCTGCAAGGGCGCAGGCCGTA
CGTGAGAGCAACTGCAGTGC

Downstream 100 bases:

>100_bases
CGATCTTCTTGCTGGCTTCCTTTGCAGCGGCAGCAGGTATCTTCTTGGCTGCCGACTTGCGCATAGGCTTCTTCGCTGCT
GCCGATTTGCGCGCCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHAVLIVSNALMLPTGLTGYGVQ
RLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQLPLAS

Sequences:

>Translated_125_residues
MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHAVLIVSNALMLPTGLTGYGVQ
RLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQLPLAS
>Mature_125_residues
MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHAVLIVSNALMLPTGLTGYGVQ
RLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQLPLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13853; Mature: 13853

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIVSNALMLPTGLTGYGVQRLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
LPLAS
CCCCC
>Mature Secondary Structure
MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLIVSNALMLPTGLTGYGVQRLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
LPLAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA