| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624610
Identifier: 84624610
GI number: 84624610
Start: 3337359
End: 3337736
Strand: Direct
Name: 84624610
Synonym: XOO_2953
Alternate gene names: NA
Gene position: 3337359-3337736 (Clockwise)
Preceding gene: 84624605
Following gene: 84624611
Centisome position: 67.55
GC content: 57.94
Gene sequence:
>378_bases ATGCAATTCGTCGACTCTGTGGGTTGGCTTGCCAGCATCGTCCTGATCGCCACGTTGATCCGGCAGATCTACGAACAATG GCGCTCAGACGCCGCGCAAAGCATCTCGCGCTGGTTGTTCCTCGCCCAGATCAGCGCCTCGGTATTGTTCGTCTTGTACC GTTATCTCGTTGGCCATGCGGTGTTGATTGTCAGCAATGCACTGATGCTGCCGACAGGCCTCACCGGCTACGGAGTGCAG CGACTCAAGTGCTGCAAGCTGGAGCGCACAGCTTGGATGCGGAGCGTGGATAACACCTGCAGGGTGGTTGCGATTGTCAG CTTGTCTTTTTCGCTGGCCTCCGCGGTTTCGCCGATGCAGTTGCCGCTGGCTTCGTAA
Upstream 100 bases:
>100_bases GCCCGCCTCACGCGTTGCACAACGCTTGAAGCTGCTCAAACAGGATGCAGCCGGTGCGCGCTGCAAGGGCGCAGGCCGTA CGTGAGAGCAACTGCAGTGC
Downstream 100 bases:
>100_bases CGATCTTCTTGCTGGCTTCCTTTGCAGCGGCAGCAGGTATCTTCTTGGCTGCCGACTTGCGCATAGGCTTCTTCGCTGCT GCCGATTTGCGCGCCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHAVLIVSNALMLPTGLTGYGVQ RLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQLPLAS
Sequences:
>Translated_125_residues MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHAVLIVSNALMLPTGLTGYGVQ RLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQLPLAS >Mature_125_residues MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHAVLIVSNALMLPTGLTGYGVQ RLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQLPLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13853; Mature: 13853
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIVSNALMLPTGLTGYGVQRLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC LPLAS CCCCC >Mature Secondary Structure MQFVDSVGWLASIVLIATLIRQIYEQWRSDAAQSISRWLFLAQISASVLFVLYRYLVGHA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIVSNALMLPTGLTGYGVQRLKCCKLERTAWMRSVDNTCRVVAIVSLSFSLASAVSPMQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC LPLAS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA