| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624567
Identifier: 84624567
GI number: 84624567
Start: 3288576
End: 3289169
Strand: Direct
Name: 84624567
Synonym: XOO_2910
Alternate gene names: NA
Gene position: 3288576-3289169 (Clockwise)
Preceding gene: 84624566
Following gene: 84624568
Centisome position: 66.57
GC content: 62.96
Gene sequence:
>594_bases ATGCCGCCAGCCAGCCCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTCGGTACA TGAAGTCGCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGACGCAACGCTCAGTTCGC GGTTCGCGGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGGCCGCCG GGAGAGTCCGAGCCCCGCCACTACTGGTTCTCGACGCGACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCACGGCACA AGGCCGATGGCGGATTGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGCAACTGGC GTGGTTTTCACCATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAAAAAAAC TCCGTCGCATTCAAGATGCCTGCAGTATCCAAAAGCGTCCGCCCGCGCCGGTCTGGCCCCAATGCAACGTCACCATCCCA ACTCGATTGCCACGCTGGCCTTCGGACTGGCTAG
Upstream 100 bases:
>100_bases CCCCTGAGCAGGAAGCCAGCTCAGCGAACGCGGCCTGCTGTACATGGTCGGCGTCCGCAGCAACACGAAGGTCTGGTGGG GATCGCACCAACCTGCGCCC
Downstream 100 bases:
>100_bases GCTGATCGCCAGAAGCCTCCCACACTGCCCGTGTTGCGGGGTCTCACCGTACCAACGGATTCGTATTTAGTAACACAGTA GAACTAAGCAAGGGCTGTTA
Product: ISXo8 transposase
Products: NA
Alternate protein names: ISXo8 Transposase; IS4 Family Transposase; Transposase IS4 Family Protein; ISRSO17-Transposase Protein; Transposase ISRS; Transposase-Like Protein
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPP GESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKN SVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLRTG
Sequences:
>Translated_197_residues MPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPP GESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKN SVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLRTG >Mature_196_residues PPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPG ESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNS VAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLRTG
Specific function: Unknown
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22542; Mature: 22411
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEE RAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELK HHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHHHH SELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGP HHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC NATSPSQLDCHAGLRTG CCCCCCCCCCCCCCCCC >Mature Secondary Structure PPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRV CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEE RAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTRPKQTPVKTLVATAQGRWRIERDYQELK HHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEHHHHHHHH SELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGP HHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCC NATSPSQLDCHAGLRTG CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA