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The map label for this gene is hopAE1 [H]

Identifier: 84624532

GI number: 84624532

Start: 3243059

End: 3244777

Strand: Direct

Name: hopAE1 [H]

Synonym: XOO_2875

Alternate gene names: 84624532

Gene position: 3243059-3244777 (Clockwise)

Preceding gene: 84624530

Following gene: 84624533

Centisome position: 65.65

GC content: 65.39

Gene sequence:

>1719_bases
ATGCGCGATTGCTCGTCGCGGATCGCCGCCTTCCTGGGCAACCTGTCGGTTGTCCAGGAGCTTCGGCAGTTCGATGACAG
CGCGTTCGTGGGCAAGCTGCGTAACGAACTGGTTACCGAGCCCGGATGTGCAGAGCCGAAGACGCTGCTGGCCGCCATTG
GCGAGAAGGTCGCTGAACTGTGGTCGCACCTGGACAAGAAGGCGTCGACGCCAGAGGAGGCGGAGTTCCTGGCCGAGGCC
CGGCGCTATCTCGAGCCGGTCTTGACCAGCTTGGAGACCGACATCCACACCTTGCAGCACGACGCGAGTGCCGCAAAGCG
GATATATCAGGGAGCGCTGACGCTTCTGCTGTACCCCTTGCCGCTCGCCACACTGTTCACCCAGAAGACCGGCACCTACG
CTGCGTTCAACATTGCTTCCTACACCTACACGGCGATACAGCTGGTCTCGCTTATGCGACGCCCGACAACGGACGCCAAG
CTGTTCATGAAGCATGCCATCAACCGGCACAGCCTGGTCTTCTTCATCTCGCTGATCTATGCCGTACCCACCTTCTACGC
CAAGGCCTCGCCGCTGCAGCGCAACGCCGGCTTCACCGCCGGCGCGGCGGTGGCGCAAGGGACGATGATGTTCGGCCTGC
GGCTGGGGCAGAACCTGATGGATTCGATGCGGCTGCGCTTCAACGGCGCCTTCAACCGCAGGCGTGATCTTCCCGACGGC
TTCAGGGACGCCATCGAGGGAGTCGTGGGCGATCTGCGCACGGGTCTGAGCAACGTCAACCGCTCCGTCGGCGAATTCCA
GCAGGACCGGCGGATCACGCCGCACATGGATCGGCAGCTCACCTTCTTCAAGCAGGACCTGTCCAGAGTCGTGACGGGCC
TTGAGCGGCTCTTAGCGACCGGGACGCGGAAGGAGACCCCGGTCGCCGCAAGAGATGACGCTCCAGGCTCCCTGGAGGCG
GTGCGCCGGACCCTGGAAGCATCGTTCGCAAACAACCCCGACCTGAAGGGAAAGCTCGCGCTGGCGACCGTCGCCTTCGC
CGTCCTCGGGTCGAACATCGCCCTGATGCGCAATAACGGGCTGGCCCTACCTGACTTCATCGCCGATGCGGTCGTCTCGT
CGACGTTCCTGCTCAGTGAAGCGCTGAGCCCGCACGTCACGCACGCTGGGATGAACGACAGCGTGAGCGACACCGTCGGC
GGTATGACGATCGGCCTGCCCTTCTCCGTAGCCGCTGTGATGAGCAGCTACATGGACGACCCCAGGGCCAACCCATCGGG
CTTCATCGCCGGGACCGTCGGCTACACGGCGGCCTACCTGCTCTTCGGCCGGGTGGCCGGCGACGTCCTGTCCAAGGGCC
TCATGGCTACGAGCGGAGCGCTCGGCTGGGGCCAACAGCAGGCGATCCGACTCGGCCGGAGCGCGATGGCCTTGGGTTTC
GAACTGGTCGCCAGGCACAGCTCGCCTGCTGCAGCGGATGTGCACGACGTAGCCGGGGTCGAGATGGCGGGTGTGCCGCA
TGAGCCGCTGTTCTTCAGCCCCTCACAGCGGGCGTCCGCCGAACGCACCCTGGTCGGCACGCTTGAGCAGATCGGCGACG
AGTGGCACGACGCGCGCGACGCATGGGAAGGCGAATCGGAGGCAACGGCGGGCAGGGACGACCCCTGGGTCGACGCACCG
GCGGAGCTGCCCATGCAGCCGGCGCATCAGTCGGAATAA

Upstream 100 bases:

>100_bases
AGGCGTCCCGGATGTGCTTCCGCAACCGGCCCGTTCTGGGGCGAGCCAGCCGCGCCTGGCCAATCCCGGCGAAGCGAGGG
ACGTCGAGAGCAGGTTGCTC

Downstream 100 bases:

>100_bases
GCAGCCCTGCACGCGTATGGGGTCGGTAGGGATTCGTGTAGAAAGTAGCCAAACGTGAGCTGATGTGCTGTCAGTGAAAG
GTTTATGACACGCATCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Type III effector holPsyAE [H]

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MRDCSSRIAAFLGNLSVVQELRQFDDSAFVGKLRNELVTEPGCAEPKTLLAAIGEKVAELWSHLDKKASTPEEAEFLAEA
RRYLEPVLTSLETDIHTLQHDASAAKRIYQGALTLLLYPLPLATLFTQKTGTYAAFNIASYTYTAIQLVSLMRRPTTDAK
LFMKHAINRHSLVFFISLIYAVPTFYAKASPLQRNAGFTAGAAVAQGTMMFGLRLGQNLMDSMRLRFNGAFNRRRDLPDG
FRDAIEGVVGDLRTGLSNVNRSVGEFQQDRRITPHMDRQLTFFKQDLSRVVTGLERLLATGTRKETPVAARDDAPGSLEA
VRRTLEASFANNPDLKGKLALATVAFAVLGSNIALMRNNGLALPDFIADAVVSSTFLLSEALSPHVTHAGMNDSVSDTVG
GMTIGLPFSVAAVMSSYMDDPRANPSGFIAGTVGYTAAYLLFGRVAGDVLSKGLMATSGALGWGQQQAIRLGRSAMALGF
ELVARHSSPAAADVHDVAGVEMAGVPHEPLFFSPSQRASAERTLVGTLEQIGDEWHDARDAWEGESEATAGRDDPWVDAP
AELPMQPAHQSE

Sequences:

>Translated_572_residues
MRDCSSRIAAFLGNLSVVQELRQFDDSAFVGKLRNELVTEPGCAEPKTLLAAIGEKVAELWSHLDKKASTPEEAEFLAEA
RRYLEPVLTSLETDIHTLQHDASAAKRIYQGALTLLLYPLPLATLFTQKTGTYAAFNIASYTYTAIQLVSLMRRPTTDAK
LFMKHAINRHSLVFFISLIYAVPTFYAKASPLQRNAGFTAGAAVAQGTMMFGLRLGQNLMDSMRLRFNGAFNRRRDLPDG
FRDAIEGVVGDLRTGLSNVNRSVGEFQQDRRITPHMDRQLTFFKQDLSRVVTGLERLLATGTRKETPVAARDDAPGSLEA
VRRTLEASFANNPDLKGKLALATVAFAVLGSNIALMRNNGLALPDFIADAVVSSTFLLSEALSPHVTHAGMNDSVSDTVG
GMTIGLPFSVAAVMSSYMDDPRANPSGFIAGTVGYTAAYLLFGRVAGDVLSKGLMATSGALGWGQQQAIRLGRSAMALGF
ELVARHSSPAAADVHDVAGVEMAGVPHEPLFFSPSQRASAERTLVGTLEQIGDEWHDARDAWEGESEATAGRDDPWVDAP
AELPMQPAHQSE
>Mature_572_residues
MRDCSSRIAAFLGNLSVVQELRQFDDSAFVGKLRNELVTEPGCAEPKTLLAAIGEKVAELWSHLDKKASTPEEAEFLAEA
RRYLEPVLTSLETDIHTLQHDASAAKRIYQGALTLLLYPLPLATLFTQKTGTYAAFNIASYTYTAIQLVSLMRRPTTDAK
LFMKHAINRHSLVFFISLIYAVPTFYAKASPLQRNAGFTAGAAVAQGTMMFGLRLGQNLMDSMRLRFNGAFNRRRDLPDG
FRDAIEGVVGDLRTGLSNVNRSVGEFQQDRRITPHMDRQLTFFKQDLSRVVTGLERLLATGTRKETPVAARDDAPGSLEA
VRRTLEASFANNPDLKGKLALATVAFAVLGSNIALMRNNGLALPDFIADAVVSSTFLLSEALSPHVTHAGMNDSVSDTVG
GMTIGLPFSVAAVMSSYMDDPRANPSGFIAGTVGYTAAYLLFGRVAGDVLSKGLMATSGALGWGQQQAIRLGRSAMALGF
ELVARHSSPAAADVHDVAGVEMAGVPHEPLFFSPSQRASAERTLVGTLEQIGDEWHDARDAWEGESEATAGRDDPWVDAP
AELPMQPAHQSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS) (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hopW family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61865; Mature: 61865

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12615215 [H]