| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624520
Identifier: 84624520
GI number: 84624520
Start: 3212790
End: 3213494
Strand: Direct
Name: 84624520
Synonym: XOO_2863
Alternate gene names: NA
Gene position: 3212790-3213494 (Clockwise)
Preceding gene: 84624519
Following gene: 84624521
Centisome position: 65.03
GC content: 65.96
Gene sequence:
>705_bases ATGATGGGTTTTTATGTCGCAAGCGCAGCGTTGGTGGCGTTGGCGTTGCTGCTGTTGTTGGTGCCGCTGCTGCGCCGGCC CACCGGTACTGGCAACGCGCGCTACAGCTTGCCGATCCTGCTGGTCCTCGGCCTGCCGCTGGCCACGGCCGGTTTATACC GGCTGGTGGGCGCGCCGGAGGCGATGGCCACGCACGTGTATGCAGCGCGGCCACCGCAAGCCGAAGCAGTGGCACCACCA GCGGCTGCTGCCGGGCAGGCACAGGCTGCGAGCACCGCTGACGACACGCAGGAACAAGCGCTGGAACGCTGGATGCAGCA GGCCAAAACGGACGAGCACAACGATCGCCCCGCCGACGCGCGTGAGGCCTATGCGCAAGCGCTCAGGATCGCACCCGACA TCAGCGCCGCCATTGTCGGCTGGGTGGCGGCAGATATGGCCACGCACAGCGACTTCGCCATCGATGCCGCGTCGCGCGCA AGATTGCAGCACGTGATCGCCCGCGAGCCGGACAATCAGCGCGGTTTGTGGTTACTGGGCATCAGCGATTTTCAGCAGCA AGACTTCGCCGCGGCCACCGCACATTGGCGCCATCTGCATGGCTTGCTTGAGACCGGCTCGCCAATGCAGAAAGCGGTGG CAGACAAGATCTCGGTGGCCGAATCGATGTCCAGTGCGCGGCAGTCCGAGCGTGGCGCGCGGTGA
Upstream 100 bases:
>100_bases CGCTGATGTTGGCTGGTGGTGCGGGCGTGGTGATCCACACCGTGCGCAAACGTGCGCGCATCGGGACACCGGTGGCGCCT CAGGCTGAGGAAGAGTGGTG
Downstream 100 bases:
>100_bases CACAGGCGGCTCCTGCGCGGCTGGGCCTAATGTGAGATGGCTACCACGTTATGCCGATTGAACAGCGCGTGCATTAGGTC TGCGCCTCACCCTGGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MMGFYVASAALVALALLLLLVPLLRRPTGTGNARYSLPILLVLGLPLATAGLYRLVGAPEAMATHVYAARPPQAEAVAPP AAAAGQAQAASTADDTQEQALERWMQQAKTDEHNDRPADAREAYAQALRIAPDISAAIVGWVAADMATHSDFAIDAASRA RLQHVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKISVAESMSSARQSERGAR
Sequences:
>Translated_234_residues MMGFYVASAALVALALLLLLVPLLRRPTGTGNARYSLPILLVLGLPLATAGLYRLVGAPEAMATHVYAARPPQAEAVAPP AAAAGQAQAASTADDTQEQALERWMQQAKTDEHNDRPADAREAYAQALRIAPDISAAIVGWVAADMATHSDFAIDAASRA RLQHVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKISVAESMSSARQSERGAR >Mature_234_residues MMGFYVASAALVALALLLLLVPLLRRPTGTGNARYSLPILLVLGLPLATAGLYRLVGAPEAMATHVYAARPPQAEAVAPP AAAAGQAQAASTADDTQEQALERWMQQAKTDEHNDRPADAREAYAQALRIAPDISAAIVGWVAADMATHSDFAIDAASRA RLQHVIAREPDNQRGLWLLGISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKISVAESMSSARQSERGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24947; Mature: 24947
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGFYVASAALVALALLLLLVPLLRRPTGTGNARYSLPILLVLGLPLATAGLYRLVGAPE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH AMATHVYAARPPQAEAVAPPAAAAGQAQAASTADDTQEQALERWMQQAKTDEHNDRPADA HHHHHHHHCCCCCCCCCCCCCHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH REAYAQALRIAPDISAAIVGWVAADMATHSDFAIDAASRARLQHVIAREPDNQRGLWLLG HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE ISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKISVAESMSSARQSERGAR CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMGFYVASAALVALALLLLLVPLLRRPTGTGNARYSLPILLVLGLPLATAGLYRLVGAPE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH AMATHVYAARPPQAEAVAPPAAAAGQAQAASTADDTQEQALERWMQQAKTDEHNDRPADA HHHHHHHHCCCCCCCCCCCCCHHCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH REAYAQALRIAPDISAAIVGWVAADMATHSDFAIDAASRARLQHVIAREPDNQRGLWLLG HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE ISDFQQQDFAAATAHWRHLHGLLETGSPMQKAVADKISVAESMSSARQSERGAR CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA