| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84624513
Identifier: 84624513
GI number: 84624513
Start: 3207209
End: 3208264
Strand: Direct
Name: 84624513
Synonym: XOO_2856
Alternate gene names: NA
Gene position: 3207209-3208264 (Clockwise)
Preceding gene: 84624512
Following gene: 84624514
Centisome position: 64.92
GC content: 65.06
Gene sequence:
>1056_bases ATGGACAGCATCAAGCAACGCTACAAATTGCGCGAAGTCTCGGCCTGGCCAATCACTTCGCTGGGTCTGTATTGCGCTGT GCTGCAACCGCCGCCGGGCGTGTCGCGCGATGAACTGGTCAGTGCACTCGCTGACGACGAAGGCGTGGAGCTGGTGCAAC CGGTGCAGGATTTCTCGGTGTTCTCCGCCGACGCGTCGGAAAAGACCACCCCGCTGTCCAGCTACAACGACCCGTACGTT GACATGCAACGCGGCTTCATCGACACCGATGCCGCCAGCGCGCAGACCGTGACACAGGGGCGCGGGGTGGTGATCGCGGT CGTCGATACCGGCGTAGATACCAACCACCCGGATCTGAAAGCGCGCATCCGCGACGTGCACGATCTGGTCGATGACAAAC CAGTCATGACCAGCACCGACTCGCACGGCACCGAAGTGGCCGGCATCATTGCCGCCGGCAGCAACAATCACCAAGGCATC GTCGGCATGGCCCCCAAGGCCATGTTGAGCGTCTACAAGGCGTGCTGGTACGCGCCCACCGTGGGCGCCACTGCACGCTG CAATACCTTCACCCTGGCCAAGGCGCTGGCGGCGATCAACAACAGCTCCGCGCGCGTGATCAATCTGAGCCTGGGCGGCC CGGCCGATCCGCTGTTGAGCAAGATGCTGGAGCAGCTGGTGCAACAGGGCCGCATCGTGGTGGCGGCAATGCCGCCGAAC GAGCGTCTGGACGGGTTTCCCAACGACGTACCCGGCGTACTGGTGGTGCGCAGCAGCAGCGCAACGCCGGCCATGCCGGG CGTGCTCAGCGCGCCCGGCACGGACATCCTGACCACGCAGCCGAACGGCCGTTACGACTTTACCTCCGGCTCGTCGATGG CCACCGCGCATGTCAGCGGCATGGCCGCGCTGCTGTTGTCGCTGCAACCGTCGATGGATGCCAAGGCCTTGCGCGCGCTC ATGCAGCGCACCAGCAAGGTCTCCGACGGGCAGTTGCAGGTCAACGCCGGCGCCGCAGTGCAGGCGTTGGCGCCTCACGC CAGACACTCCAACTGA
Upstream 100 bases:
>100_bases GGTGGCCAACCCGCTCGCCGCGCCGCCAGCCCGCGCCGGCTCCAGCCTGATCGGCTATGCGTCCAGCTATTACGGCGCCG GCCAGAAGGCGGCCGCGCAC
Downstream 100 bases:
>100_bases CGGCACCGGCATGGCCAAGTGGATTCCCTTGTGGCTGCACCAACTCAGTTCGCCGCCCACGTTCTATCGCCTCGCCGGCA ACGTGCGCCCGTGGGCGCTG
Product: serine protease
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MDSIKQRYKLREVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSVFSADASEKTTPLSSYNDPYV DMQRGFIDTDAASAQTVTQGRGVVIAVVDTGVDTNHPDLKARIRDVHDLVDDKPVMTSTDSHGTEVAGIIAAGSNNHQGI VGMAPKAMLSVYKACWYAPTVGATARCNTFTLAKALAAINNSSARVINLSLGGPADPLLSKMLEQLVQQGRIVVAAMPPN ERLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGTDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQPSMDAKALRAL MQRTSKVSDGQLQVNAGAAVQALAPHARHSN
Sequences:
>Translated_351_residues MDSIKQRYKLREVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSVFSADASEKTTPLSSYNDPYV DMQRGFIDTDAASAQTVTQGRGVVIAVVDTGVDTNHPDLKARIRDVHDLVDDKPVMTSTDSHGTEVAGIIAAGSNNHQGI VGMAPKAMLSVYKACWYAPTVGATARCNTFTLAKALAAINNSSARVINLSLGGPADPLLSKMLEQLVQQGRIVVAAMPPN ERLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGTDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQPSMDAKALRAL MQRTSKVSDGQLQVNAGAAVQALAPHARHSN >Mature_351_residues MDSIKQRYKLREVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSVFSADASEKTTPLSSYNDPYV DMQRGFIDTDAASAQTVTQGRGVVIAVVDTGVDTNHPDLKARIRDVHDLVDDKPVMTSTDSHGTEVAGIIAAGSNNHQGI VGMAPKAMLSVYKACWYAPTVGATARCNTFTLAKALAAINNSSARVINLSLGGPADPLLSKMLEQLVQQGRIVVAAMPPN ERLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGTDILTTQPNGRYDFTSGSSMATAHVSGMAALLLSLQPSMDAKALRAL MQRTSKVSDGQLQVNAGAAVQALAPHARHSN
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 36874; Mature: 36874
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSIKQRYKLREVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSV CCCHHHHHHHHHCCCCCCHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHE FSADASEKTTPLSSYNDPYVDMQRGFIDTDAASAQTVTQGRGVVIAVVDTGVDTNHPDLK EECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCHHH ARIRDVHDLVDDKPVMTSTDSHGTEVAGIIAAGSNNHQGIVGMAPKAMLSVYKACWYAPT HHHHHHHHHHCCCCCEECCCCCCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCC VGATARCNTFTLAKALAAINNSSARVINLSLGGPADPLLSKMLEQLVQQGRIVVAAMPPN CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCC ERLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGTDILTTQPNGRYDFTSGSSMATAHVSG CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHH MAALLLSLQPSMDAKALRALMQRTSKVSDGQLQVNAGAAVQALAPHARHSN HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCC >Mature Secondary Structure MDSIKQRYKLREVSAWPITSLGLYCAVLQPPPGVSRDELVSALADDEGVELVQPVQDFSV CCCHHHHHHHHHCCCCCCHHCCEEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHE FSADASEKTTPLSSYNDPYVDMQRGFIDTDAASAQTVTQGRGVVIAVVDTGVDTNHPDLK EECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCHHH ARIRDVHDLVDDKPVMTSTDSHGTEVAGIIAAGSNNHQGIVGMAPKAMLSVYKACWYAPT HHHHHHHHHHCCCCCEECCCCCCCEEEEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCC VGATARCNTFTLAKALAAINNSSARVINLSLGGPADPLLSKMLEQLVQQGRIVVAAMPPN CCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCC ERLDGFPNDVPGVLVVRSSSATPAMPGVLSAPGTDILTTQPNGRYDFTSGSSMATAHVSG CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHH MAALLLSLQPSMDAKALRALMQRTSKVSDGQLQVNAGAAVQALAPHARHSN HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]