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The map label for this gene is ytfL [C]

Identifier: 84624483

GI number: 84624483

Start: 3174801

End: 3176141

Strand: Direct

Name: ytfL [C]

Synonym: XOO_2826

Alternate gene names: 84624483

Gene position: 3174801-3176141 (Clockwise)

Preceding gene: 84624479

Following gene: 84624484

Centisome position: 64.26

GC content: 63.39

Gene sequence:

>1341_bases
GTGGTTGAGTTTCTGATCGTCATCGCCCTGATTGTGTTGAACGGCTTCTTCGCCATGTCGGAGATGTCGTTGATGACCTC
GCGCAAGAGCCGCCTGAAGCAGATGGCCGGCTCGAGCAAACGCGCTGCGCGGGCCCTGGCATTGGCCGAAAGCCCGGAAA
ACTTTTTGTCCACGGTGCAGATCGGTATCACCCTGATCGGCATCCTGACCGGCGTGTTCGGGGGCGAAGCGATCGGTGAG
GCCATCGCCAGCTGGCTGCAGGGCGTGTTCCCGGCCCTGGCGGCCTCGTTCGAACTGGTCGGCAAGCCGCGTCCGTATTC
GGTCGTCATCGGCAGCACCCTGGCAGTGGCGCTGATCACCTTCCTGACGCTGATCTTCGGCGAGCTGGTGCCCAAGCGGC
TGGCGCTGCGCAATTCCGAAGACGTCGCAGGGGTGGTCGCAGTACCGATGGGCTGGCTGGCCAAGATTGCCGCGCCCGGC
GTGTGGGTGCTGGCGCGCTCCACCCGGCTGGTGTTGCGCATGTTGGGCATGGGCAAGAACGAGTCGGCATCGATCACCGA
AGAAGAGATCCGCATGCTGGTGGCCGAAAGCCACGAGGCCGGGGTGATCGACGCCCACGAGCGCGACATGATGAATCGCG
TGATGCGGCTGGGCGACCGCACCGCCGACAGCCTGATGACCCCGCGCAACCGCATCGCCTGGCTGGACGCCAACGCCGAG
CCGGAACGCAATCTGCAGGTGATGCGCGAGCACGAATTTTCGCGCTACCCGGTCTACCGCGGCAGCGACCAGGACATTGC
AGGCGTGCTGGAAGTCAAATCGCTGGTCACGCGCATGGGCGGGCACGGCGAGAATCTCTTCCAGGCGCTGCGCGACACGT
TATTCGTGTCCGAATCCACGCATGCGATGAAGCTGCTGGAAATCTTTCGCGAAGAACAGCAGTCGATGGCACTGGTGGTC
GACGAATATGGCGAGATCCGCGGATTGGTGACCATCAGCGACCTGATGGGCGCGGTGGTCGGCCGTTTGCAGGCGGTGGA
AAACACCGACGAAGATGCGCTGGTGATCACGCGCGCCGACGGCTCGCTGCTGATCGACGGCTCGCTGCCGGTGGAAGAAC
TCCGCGAAGTGCTGGGCGCCGATTTGCCGGACGCCGACGAAGGCGATTACCACACGCTTGCGGGCCTGTGCATTTATTAC
TTCGGGCGCATTCCGCAGGCCGGTGAATTCTTCGATTGGGCCGGTTGGCGCATCGAAATCGTCGACCTGGATGGTGCGCG
CGTGGATAAGTTGCTGTTGAGCCGAGTGGGCGACGAGGACAGCGATGACATCGTCGGATGA

Upstream 100 bases:

>100_bases
GAAGACGACCCTATCCCCCCGTGTTGCCGCCCGGCCTGTTCGCCCGCCGGCACACCCAGTGCTCCCCAGCCCTCCCCTTC
ACTGACCGGGGAAGACGCCC

Downstream 100 bases:

>100_bases
CGGCAGCGCGCCGCGCCACGACAGCAGCGAGCAGATGCGTTACCGCAACGAACGCATTCGCAGCTTGCTGGCGGCCTTCA
GCGAGAGAGACCCGGACCAG

Product: hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MVEFLIVIALIVLNGFFAMSEMSLMTSRKSRLKQMAGSSKRAARALALAESPENFLSTVQIGITLIGILTGVFGGEAIGE
AIASWLQGVFPALAASFELVGKPRPYSVVIGSTLAVALITFLTLIFGELVPKRLALRNSEDVAGVVAVPMGWLAKIAAPG
VWVLARSTRLVLRMLGMGKNESASITEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANAE
PERNLQVMREHEFSRYPVYRGSDQDIAGVLEVKSLVTRMGGHGENLFQALRDTLFVSESTHAMKLLEIFREEQQSMALVV
DEYGEIRGLVTISDLMGAVVGRLQAVENTDEDALVITRADGSLLIDGSLPVEELREVLGADLPDADEGDYHTLAGLCIYY
FGRIPQAGEFFDWAGWRIEIVDLDGARVDKLLLSRVGDEDSDDIVG

Sequences:

>Translated_446_residues
MVEFLIVIALIVLNGFFAMSEMSLMTSRKSRLKQMAGSSKRAARALALAESPENFLSTVQIGITLIGILTGVFGGEAIGE
AIASWLQGVFPALAASFELVGKPRPYSVVIGSTLAVALITFLTLIFGELVPKRLALRNSEDVAGVVAVPMGWLAKIAAPG
VWVLARSTRLVLRMLGMGKNESASITEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANAE
PERNLQVMREHEFSRYPVYRGSDQDIAGVLEVKSLVTRMGGHGENLFQALRDTLFVSESTHAMKLLEIFREEQQSMALVV
DEYGEIRGLVTISDLMGAVVGRLQAVENTDEDALVITRADGSLLIDGSLPVEELREVLGADLPDADEGDYHTLAGLCIYY
FGRIPQAGEFFDWAGWRIEIVDLDGARVDKLLLSRVGDEDSDDIVG
>Mature_446_residues
MVEFLIVIALIVLNGFFAMSEMSLMTSRKSRLKQMAGSSKRAARALALAESPENFLSTVQIGITLIGILTGVFGGEAIGE
AIASWLQGVFPALAASFELVGKPRPYSVVIGSTLAVALITFLTLIFGELVPKRLALRNSEDVAGVVAVPMGWLAKIAAPG
VWVLARSTRLVLRMLGMGKNESASITEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANAE
PERNLQVMREHEFSRYPVYRGSDQDIAGVLEVKSLVTRMGGHGENLFQALRDTLFVSESTHAMKLLEIFREEQQSMALVV
DEYGEIRGLVTISDLMGAVVGRLQAVENTDEDALVITRADGSLLIDGSLPVEELREVLGADLPDADEGDYHTLAGLCIYY
FGRIPQAGEFFDWAGWRIEIVDLDGARVDKLLLSRVGDEDSDDIVG

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=381, Percent_Identity=25.9842519685039, Blast_Score=167, Evalue=2e-41,
Organism=Escherichia coli, GI1790664, Length=439, Percent_Identity=29.3849658314351, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI145693175, Length=416, Percent_Identity=29.3269230769231, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI87082033, Length=269, Percent_Identity=33.8289962825279, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1788119, Length=268, Percent_Identity=29.8507462686567, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1786879, Length=243, Percent_Identity=28.3950617283951, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 48783; Mature: 48783

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEFLIVIALIVLNGFFAMSEMSLMTSRKSRLKQMAGSSKRAARALALAESPENFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH
IGITLIGILTGVFGGEAIGEAIASWLQGVFPALAASFELVGKPRPYSVVIGSTLAVALIT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH
FLTLIFGELVPKRLALRNSEDVAGVVAVPMGWLAKIAAPGVWVLARSTRLVLRMLGMGKN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCC
ESASITEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANAE
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCC
PERNLQVMREHEFSRYPVYRGSDQDIAGVLEVKSLVTRMGGHGENLFQALRDTLFVSEST
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
HAMKLLEIFREEQQSMALVVDEYGEIRGLVTISDLMGAVVGRLQAVENTDEDALVITRAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCEEEEEECC
GSLLIDGSLPVEELREVLGADLPDADEGDYHTLAGLCIYYFGRIPQAGEFFDWAGWRIEI
CCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
VDLDGARVDKLLLSRVGDEDSDDIVG
EECCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVEFLIVIALIVLNGFFAMSEMSLMTSRKSRLKQMAGSSKRAARALALAESPENFLSTVQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHH
IGITLIGILTGVFGGEAIGEAIASWLQGVFPALAASFELVGKPRPYSVVIGSTLAVALIT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH
FLTLIFGELVPKRLALRNSEDVAGVVAVPMGWLAKIAAPGVWVLARSTRLVLRMLGMGKN
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCC
ESASITEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANAE
CCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCC
PERNLQVMREHEFSRYPVYRGSDQDIAGVLEVKSLVTRMGGHGENLFQALRDTLFVSEST
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
HAMKLLEIFREEQQSMALVVDEYGEIRGLVTISDLMGAVVGRLQAVENTDEDALVITRAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCCCEEEEEECC
GSLLIDGSLPVEELREVLGADLPDADEGDYHTLAGLCIYYFGRIPQAGEFFDWAGWRIEI
CCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
VDLDGARVDKLLLSRVGDEDSDDIVG
EECCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]