| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84624413
Identifier: 84624413
GI number: 84624413
Start: 3107617
End: 3107850
Strand: Direct
Name: 84624413
Synonym: XOO_2756
Alternate gene names: NA
Gene position: 3107617-3107850 (Clockwise)
Preceding gene: 84624412
Following gene: 84624415
Centisome position: 62.9
GC content: 61.97
Gene sequence:
>234_bases ATGCCGGAAGATGTGCGCAAACTAGTGGACGACTACGACACCTGCGAGCACTTCGCCGGCGAAGAACCGTATGACGCCGA CCGCCGGCATGAAATCGAAGTGGCCGTGGCGCAGTTCTGCACACCGGCACCGGCCCGGCTGGCCAAGTTGATGCAGCAGT ACCGCAACGAAGCGCATGTCAGCCAATGGCTGCGCCAGTATGCAAGGCAAGCGGATCTGCAACCAGCCGGCTGA
Upstream 100 bases:
>100_bases GCAACAGGCTCCGACGCAGGCCGCAACGCCCGCGCCGGTGGCCTGCACCGACCCCAAGGTGGAAGACGAATAGCTGCAGC ATCCGGCAGGCCTGTGCGGC
Downstream 100 bases:
>100_bases GTCGGCGCAGGTTGCCAGAGCTGCCATAACACACGCGTCGCCACGCGTCGTCAGCAATCCCTCCAGCTGCTTTGCCTGCC CCGATCCTTGCTCGCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPEDVRKLVDDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNEAHVSQWLRQYARQADLQPAG
Sequences:
>Translated_77_residues MPEDVRKLVDDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNEAHVSQWLRQYARQADLQPAG >Mature_76_residues PEDVRKLVDDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNEAHVSQWLRQYARQADLQPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8947; Mature: 8816
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEDVRKLVDDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNEAHV CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SQWLRQYARQADLQPAG HHHHHHHHHHCCCCCCC >Mature Secondary Structure PEDVRKLVDDYDTCEHFAGEEPYDADRRHEIEVAVAQFCTPAPARLAKLMQQYRNEAHV CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH SQWLRQYARQADLQPAG HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA