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The map label for this gene is tcp [H]

Identifier: 84624360

GI number: 84624360

Start: 3044543

End: 3046804

Strand: Direct

Name: tcp [H]

Synonym: XOO_2703

Alternate gene names: 84624360

Gene position: 3044543-3046804 (Clockwise)

Preceding gene: 84624359

Following gene: 84624361

Centisome position: 61.63

GC content: 62.73

Gene sequence:

>2262_bases
ATGATCGCTCTTCTTCAACGCTACAACGTCGGCAAGCGCCTGAGCTTTGCCTTCGGCACGCTGATCCTGCTGTCCTGCGC
CCTGGTGGTCGCCGGCCTGTACACGCTGGCGCAGGCACGCCAAACCCTGGATACGCTGACCAATCGGAATATGGTCATCG
TCCAGCGTCTGCAGGAAATGAACAACGCGGTATCGGTCATCGCCGTGCAGTTGCGCAACATCGTGTTGCCGACGCCAGAC
GAAGAAAATCAACACTTTGTGTCGATCATCGAAGAGCAGCGCCGCATCTACAAGGATGCGCACGACAAGCTTTACACCTT
CTCGGCAACGCCTGTGGGCCAGGCGATACGTGCCAAGATCGATGCCAGCAACAAGGCCGCCCGCGCGCTCAACCAGCAGG
TGATCGACCTGGACCTTTCCGGCAGGACCAACGAAGCGATGCCCTTGCTGTTGCAGCGTGCTGCACCGGCCACGCAGGCA
TGGCAGGACGCGCTGCTGGAGTATTCGGAGCTGCAGCGCAAGCGCGCCCAGGAAGCCAATGCGCTCGCTACCACGGCGAT
GGCGCGTGGCCGTGCCATGTTGATTGGCGGCGGCCTGGTGGTGGTGTTGATCAGCGGCGTGCTGGCATGGCTGATTACCC
GCAGCTTGGTGGTTCCGCTGACGCGCGCCACCCGCGCTGCCGAAGCCATTGCCCAGGGCAAGTTGGACAACGACGTCAGC
ACGCAATCCAACGACGAACCCGGCCGTCTGTTGCACGCGATGGACGGCATGCAGGGCCAGCTGCGCAATCTGATTTCCGC
ACAGCTGGGCATGGCCAAGCGCCATGAAGAGGGCCAGATCAGCTTTCGCATGGATGCCGGCGCATTCCCGGGCGATTTCG
GCAGCATGGCCAATGACACCAACGCGCTCGTGGCCTCGCATATCAAGCTCAAGATGCAGACCCTCCACCTGATCGAGCGT
TACGCCATCGGCGACCTGTCTGAAGACATGCCGCAACTGCCCGGCGAAAAAGGCGCCATCACCGCGGCGATGAACCAGGT
CAAGCAGAACCTCGCAACGATGAACACCGAGATCAAGCAGCTGGCGCAGGCCGCGGCCAATGGTGACTTCACCGCGCGCG
GCAATGCCGAGCAATTCCAGTTCGATTTCCGCGTGATGGTGGAAAGCCTCAACACCTTGATGGCCACCGCCGATGGCAAT
CTGCAGTCGCTCTCGGGCCTGTTGCAGTCGATCGCTGCCGGCGACCTCACCGCACGCATGGGTGGCCAATATCAGGGCGT
GTTTGCGCAGATGCGCAACGACGCCAATGCCACCGCAGAACAACTGGCCAGCATCGTCGGCCGCATCCAGATCGCGGCCG
ATGCGATTGGTCTGGCATCGGGCGAAATCGCCTCCGGCAATCAGGATCTGTCGCAGCGCACCGAACAGCAGGCCGCCAAT
CTGGAAGAAACCGCTGCCTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAATGCCGAACACGCCAGCCAGGCCAATCA
GCTCGCAATTGGCGCCGCTGCGGTCGCCTCGCAAGGCGGTGACGTGGTGGCCAAGGTGGTCACCACCATGTCCGATATCC
AGGGCTCGTCCAAAAAGATCGCCGAGATCATCAGCGTCATCGACGGAATCGCCTTCCAGACCAATATCCTGGCCTTGAAT
GCCGCGGTGGAAGCGGCACGTGCCGGCGAACAGGGTCGTGGTTTTGCGGTGGTCGCATCTGAAGTGCGCACGCTGGCGCA
GCGTTCGGCCGGTGCCGCCAAGGAGATCAAGCACCTGATCGACGACTCGGTCGAGAAGGTTACCCACGGCGCAACGCTGG
TCGATCAGGCCGGTACCACCATGGCCGAGATCGTCGCCAGCGTGCAGCGCGTCACCAACATCATGGGTGAGATTTCCTCC
GCCTCGCAGGAGCAGTACGCGGGTATCGAGCAGGTCAACCAGACCGTCACCCAGATGGACGAAACCACCCAGCAGAACGC
CGCCTTGGTGGAAGAAGCCACTGCCGCCGCACGTGCGATGGAAGAGCAGGCCCAGCAGCTGACCGAAGCGGTGGCAGTGT
TCAAGGTGGCTGCGCATGCGCCGGTAGCGCGTCGGTTGTCGGCCATTGCCAGCGCGCCGTCCAATGCCCGCTTCGCACCG
CAGCCGGCAGCACGCGTCACCCCGGCGGCCGCAGCGCCACGTCGCAGCGTTGGAAGCAGCGCCGCATCGCATGCAGATTC
GGGCAATTGGCAGGATTTCTGA

Upstream 100 bases:

>100_bases
GGTTCGACGCAGGCCCGCATCGGCGCCACCAGCGTAGCCACTAGGCCACCGCGCCGAGCGCATCGCCCCCTTCCTGCCCA
TCGTTCTCGAGATCCCATCC

Downstream 100 bases:

>100_bases
CCGCGTAGACGTTCTGATCGCAAAGGCAACATCGCCACGATAGTCCGTCGCAAACGGCTGTCGTGGCATTGCGCCAATGC
CGCGCCTGGTGTTCAGCCGA

Product: chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MIALLQRYNVGKRLSFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTPD
EENQHFVSIIEEQRRIYKDAHDKLYTFSATPVGQAIRAKIDASNKAARALNQQVIDLDLSGRTNEAMPLLLQRAAPATQA
WQDALLEYSELQRKRAQEANALATTAMARGRAMLIGGGLVVVLISGVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
TQSNDEPGRLLHAMDGMQGQLRNLISAQLGMAKRHEEGQISFRMDAGAFPGDFGSMANDTNALVASHIKLKMQTLHLIER
YAIGDLSEDMPQLPGEKGAITAAMNQVKQNLATMNTEIKQLAQAAANGDFTARGNAEQFQFDFRVMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMGGQYQGVFAQMRNDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTHGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTQMDETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPSNARFAP
QPAARVTPAAAAPRRSVGSSAASHADSGNWQDF

Sequences:

>Translated_753_residues
MIALLQRYNVGKRLSFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTPD
EENQHFVSIIEEQRRIYKDAHDKLYTFSATPVGQAIRAKIDASNKAARALNQQVIDLDLSGRTNEAMPLLLQRAAPATQA
WQDALLEYSELQRKRAQEANALATTAMARGRAMLIGGGLVVVLISGVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
TQSNDEPGRLLHAMDGMQGQLRNLISAQLGMAKRHEEGQISFRMDAGAFPGDFGSMANDTNALVASHIKLKMQTLHLIER
YAIGDLSEDMPQLPGEKGAITAAMNQVKQNLATMNTEIKQLAQAAANGDFTARGNAEQFQFDFRVMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMGGQYQGVFAQMRNDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTHGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTQMDETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPSNARFAP
QPAARVTPAAAAPRRSVGSSAASHADSGNWQDF
>Mature_753_residues
MIALLQRYNVGKRLSFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEMNNAVSVIAVQLRNIVLPTPD
EENQHFVSIIEEQRRIYKDAHDKLYTFSATPVGQAIRAKIDASNKAARALNQQVIDLDLSGRTNEAMPLLLQRAAPATQA
WQDALLEYSELQRKRAQEANALATTAMARGRAMLIGGGLVVVLISGVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
TQSNDEPGRLLHAMDGMQGQLRNLISAQLGMAKRHEEGQISFRMDAGAFPGDFGSMANDTNALVASHIKLKMQTLHLIER
YAIGDLSEDMPQLPGEKGAITAAMNQVKQNLATMNTEIKQLAQAAANGDFTARGNAEQFQFDFRVMVESLNTLMATADGN
LQSLSGLLQSIAAGDLTARMGGQYQGVFAQMRNDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKIAEIISVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVEKVTHGATLVDQAGTTMAEIVASVQRVTNIMGEISS
ASQEQYAGIEQVNQTVTQMDETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPSNARFAP
QPAARVTPAAAAPRRSVGSSAASHADSGNWQDF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=347, Percent_Identity=57.6368876080692, Blast_Score=298, Evalue=9e-82,
Organism=Escherichia coli, GI1788195, Length=285, Percent_Identity=61.4035087719298, Blast_Score=287, Evalue=2e-78,
Organism=Escherichia coli, GI1787690, Length=300, Percent_Identity=55, Blast_Score=279, Evalue=5e-76,
Organism=Escherichia coli, GI1788194, Length=304, Percent_Identity=55.2631578947368, Blast_Score=278, Evalue=7e-76,
Organism=Escherichia coli, GI1789453, Length=235, Percent_Identity=47.2340425531915, Blast_Score=201, Evalue=1e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79982; Mature: 79982

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALLQRYNVGKRLSFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEM
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NNAVSVIAVQLRNIVLPTPDEENQHFVSIIEEQRRIYKDAHDKLYTFSATPVGQAIRAKI
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHH
DASNKAARALNQQVIDLDLSGRTNEAMPLLLQRAAPATQAWQDALLEYSELQRKRAQEAN
CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALATTAMARGRAMLIGGGLVVVLISGVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TQSNDEPGRLLHAMDGMQGQLRNLISAQLGMAKRHEEGQISFRMDAGAFPGDFGSMANDT
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
NALVASHIKLKMQTLHLIERYAIGDLSEDMPQLPGEKGAITAAMNQVKQNLATMNTEIKQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAQAAANGDFTARGNAEQFQFDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARM
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
GGQYQGVFAQMRNDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
AEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
DDSVEKVTHGATLVDQAGTTMAEIVASVQRVTNIMGEISSASQEQYAGIEQVNQTVTQMD
HHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPSNARFAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
QPAARVTPAAAAPRRSVGSSAASHADSGNWQDF
CCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MIALLQRYNVGKRLSFAFGTLILLSCALVVAGLYTLAQARQTLDTLTNRNMVIVQRLQEM
CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NNAVSVIAVQLRNIVLPTPDEENQHFVSIIEEQRRIYKDAHDKLYTFSATPVGQAIRAKI
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHH
DASNKAARALNQQVIDLDLSGRTNEAMPLLLQRAAPATQAWQDALLEYSELQRKRAQEAN
CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALATTAMARGRAMLIGGGLVVVLISGVLAWLITRSLVVPLTRATRAAEAIAQGKLDNDVS
HHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TQSNDEPGRLLHAMDGMQGQLRNLISAQLGMAKRHEEGQISFRMDAGAFPGDFGSMANDT
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
NALVASHIKLKMQTLHLIERYAIGDLSEDMPQLPGEKGAITAAMNQVKQNLATMNTEIKQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAQAAANGDFTARGNAEQFQFDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARM
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH
GGQYQGVFAQMRNDANATAEQLASIVGRIQIAADAIGLASGEIASGNQDLSQRTEQQAAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEETAASMEELTSTVKQNAEHASQANQLAIGAAAVASQGGDVVAKVVTTMSDIQGSSKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
AEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLI
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
DDSVEKVTHGATLVDQAGTTMAEIVASVQRVTNIMGEISSASQEQYAGIEQVNQTVTQMD
HHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ETTQQNAALVEEATAAARAMEEQAQQLTEAVAVFKVAAHAPVARRLSAIASAPSNARFAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
QPAARVTPAAAAPRRSVGSSAASHADSGNWQDF
CCCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]