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The map label for this gene is tse [H]

Identifier: 84624358

GI number: 84624358

Start: 3038959

End: 3041190

Strand: Direct

Name: tse [H]

Synonym: XOO_2701

Alternate gene names: 84624358

Gene position: 3038959-3041190 (Clockwise)

Preceding gene: 84624357

Following gene: 84624359

Centisome position: 61.51

GC content: 62.95

Gene sequence:

>2232_bases
ATGAAACAGCTAAGTCTTTCGACGCAACTGGCACTGGGCTTCGGCACAGTTGTTCTTGTGCTCTTGATCGTTGCAACAGT
GGGGGTACGCGGGCAGTCCGAGCTGTCGGACGCCGTCGCCATAAACGACCACACCTATCAGGTCATCGCCACCGGCCGCG
CCATGACCATCGCCACGGTCAATGTGGAGACCGGCGCGCGCGGCTTCCTGCTGTCCGGGCAGGAAGCGCATCTCACGCCC
TACAACAAGGGCAAAGCGCAGTTCGAAGAAGAATTCACCCGTGCCAAGACGCTGACCGCTGACAACCCGGTGCAGCAGGA
ACGCCTGCAGCGCCTGCATGCAGCGTATGAGACGTTCATGGGCTTTGAAGACAAGTTGCTCGCGCTGCGTCGCAAAAGCA
GCAACACCGAACTGTCTGCACTGCTCACCGAGTTCAGAGCTGGCCATGAACGTGCGGCGATGGAGCAGATACGTCAGCTG
CTGTTCGACTTCGAAGCGCAGGAAAACGAACTGCTGGTCAAGCGTAGCGGGACATTGCAGGCCGCAAAGGCCCGCAGCCG
TTGGTCGATGATCATCGGCAGCGGCATCGCCGTGCTGGTGGCGCTGGTCAGCGGTTGGTTGATCCGCCGTCGTCTGATCA
ACCGCCTGGGAACCGCCTCGCACGTGGCCGATTCGGTCGCGGCCGGCAACCTGTCCATCAGCGTGGACAGCAGCGGCACC
GACGAAACCGGCCGCCTGCTCGCCAGCATGAGCAAGATGCAGCAGCAGTTGCAGAAAGTATTGCATGGCCAGCAGGAAAT
GAAGCGCCGGCACGATCAGGGCGAACTGAACTTCCGCCTGGACGAGACAGCGTTTCCTGGCGACTTCGCCACCATCGTGC
GCGGCAACAACGACTTGGTCGCTTCGCACGTGGCAGTGATGATGCGCTTGTCCCAGATCATGGGCCAGTACGCGATCGGC
GACCTGCACGAAGACATGGAAGCCCTGCCCGGCGACAAGGCCGTGCTCAGCGACACCATGGCCAAGGTCAAGGACAACCT
GTCTTCGGTCAATCGCGAAATCAAGCATCTGTCGCAGTGCGCCGCCAATGGCGACTTCAGTGCCCGCGGCGATGCCGACA
ACTTCCAGCATGACTTCCGCGTGATGGTGGAAAGCCTCAACACCTTGATGGCCACCGCCGATGGCAACCTGCAGTCGCTC
TCGGGCCTGTTGCAGTCGATTGCTGCCGGCGACCTTACCGCACGCATGAGCGGCGAATTCCACGGCGTGTTTGCGCGGAT
GCGCGACGATGCCAATGCCACCGCCACGCAGTTGGCCGAGATCGTCAACGGCATCAAGCAGTCGGCCGTGTCGATCAAGG
GCGCTGCCAGCGAAATCGCCTCCGGCAATCAGGATCTGTCGCAGCGTACCGAACAGCAGGCTGCCAGCCTGGAAGAAACC
GCAGCGTCGATGGAAGAGCTCACCTCCACCGTCAAGCAGAATGCCGAAAACGCACGCCAGGCCAACCAGCTCGCCATCGG
CGCGGCCAGTGTGGCTTCGCAAGGCGGCGAGATCGTCGGCAAGGTGGTCCAGACGATGAGCGGGATCGAAGCCTCGTCCA
AGAAAATCGCCGACATCATCAGCGTCATCGACGGCATCGCGTTCCAGACCAATATCCTGGCCTTGAACGCGGCGGTAGAA
GCCGCACGTGCCGGCGAACAGGGCCGCGGCTTCGCCGTGGTCGCCTCGGAAGTGCGCACGCTGGCGCAGCGCTCCTCGGG
CGCCGCCAAGGAAATCAAGGAGCTCATCGACGACTCGGTGCAACGCGTGACCGACGGCTCGGTGCTGGTGCACAGCGCCG
GCACCACCATGGGCGAGATCGTGGCCAGCGTGCAGCGCGTCACCGACATCATGGGCGAGATTTCTGCCGCCTCGCAGGAA
CAGTCGGCCGGCATCGAACAGGTCAACCAGACCGTCACCCAAATGGACGAAACCACCCAGCAGAACGCCGCACTGGTGGA
AGAAGCCACTGCTGCCGCACGCTCGCTGGAAGAACAGGCGGTTGGATTGACCCAGGCAGTGGCGGTCTTCAAGACCGAGC
ACGGCACCACCAGCGACGCCCGCACTGCGCCTGTCGCCAAGGTGGCGCAGGCTGCGCGTGCCAAGCTGGCCACCGCTGGC
CGCACTGCAGCCGCCAAGCCACGTGCGCTTGCTGCATCGACGAACGCCGAGACCAGTTGGCAGGAGTTCTGA

Upstream 100 bases:

>100_bases
GAACAATGCTCACTGCATCGTGCCCATCGCACGGCCGGATCAGCAGCAACGAACGGATGGCTCCCATTACTCACCGTATT
ACCAGCTCAAGGTGCATTCG

Downstream 100 bases:

>100_bases
CGGGTAGGGATCGGCATCGGTCGGCAACGGCCTACCGATGCCAACTGCGCCGGGCATCAGCTGCGCAGACAACCGTGTGT
TGGAACACCGCCGGGCCCGA

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 743; Mature: 743

Protein sequence:

>743_residues
MKQLSLSTQLALGFGTVVLVLLIVATVGVRGQSELSDAVAINDHTYQVIATGRAMTIATVNVETGARGFLLSGQEAHLTP
YNKGKAQFEEEFTRAKTLTADNPVQQERLQRLHAAYETFMGFEDKLLALRRKSSNTELSALLTEFRAGHERAAMEQIRQL
LFDFEAQENELLVKRSGTLQAAKARSRWSMIIGSGIAVLVALVSGWLIRRRLINRLGTASHVADSVAAGNLSISVDSSGT
DETGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDETAFPGDFATIVRGNNDLVASHVAVMMRLSQIMGQYAIG
DLHEDMEALPGDKAVLSDTMAKVKDNLSSVNREIKHLSQCAANGDFSARGDADNFQHDFRVMVESLNTLMATADGNLQSL
SGLLQSIAAGDLTARMSGEFHGVFARMRDDANATATQLAEIVNGIKQSAVSIKGAASEIASGNQDLSQRTEQQAASLEET
AASMEELTSTVKQNAENARQANQLAIGAASVASQGGEIVGKVVQTMSGIEASSKKIADIISVIDGIAFQTNILALNAAVE
AARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKELIDDSVQRVTDGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQE
QSAGIEQVNQTVTQMDETTQQNAALVEEATAAARSLEEQAVGLTQAVAVFKTEHGTTSDARTAPVAKVAQAARAKLATAG
RTAAAKPRALAASTNAETSWQEF

Sequences:

>Translated_743_residues
MKQLSLSTQLALGFGTVVLVLLIVATVGVRGQSELSDAVAINDHTYQVIATGRAMTIATVNVETGARGFLLSGQEAHLTP
YNKGKAQFEEEFTRAKTLTADNPVQQERLQRLHAAYETFMGFEDKLLALRRKSSNTELSALLTEFRAGHERAAMEQIRQL
LFDFEAQENELLVKRSGTLQAAKARSRWSMIIGSGIAVLVALVSGWLIRRRLINRLGTASHVADSVAAGNLSISVDSSGT
DETGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDETAFPGDFATIVRGNNDLVASHVAVMMRLSQIMGQYAIG
DLHEDMEALPGDKAVLSDTMAKVKDNLSSVNREIKHLSQCAANGDFSARGDADNFQHDFRVMVESLNTLMATADGNLQSL
SGLLQSIAAGDLTARMSGEFHGVFARMRDDANATATQLAEIVNGIKQSAVSIKGAASEIASGNQDLSQRTEQQAASLEET
AASMEELTSTVKQNAENARQANQLAIGAASVASQGGEIVGKVVQTMSGIEASSKKIADIISVIDGIAFQTNILALNAAVE
AARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKELIDDSVQRVTDGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQE
QSAGIEQVNQTVTQMDETTQQNAALVEEATAAARSLEEQAVGLTQAVAVFKTEHGTTSDARTAPVAKVAQAARAKLATAG
RTAAAKPRALAASTNAETSWQEF
>Mature_743_residues
MKQLSLSTQLALGFGTVVLVLLIVATVGVRGQSELSDAVAINDHTYQVIATGRAMTIATVNVETGARGFLLSGQEAHLTP
YNKGKAQFEEEFTRAKTLTADNPVQQERLQRLHAAYETFMGFEDKLLALRRKSSNTELSALLTEFRAGHERAAMEQIRQL
LFDFEAQENELLVKRSGTLQAAKARSRWSMIIGSGIAVLVALVSGWLIRRRLINRLGTASHVADSVAAGNLSISVDSSGT
DETGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDETAFPGDFATIVRGNNDLVASHVAVMMRLSQIMGQYAIG
DLHEDMEALPGDKAVLSDTMAKVKDNLSSVNREIKHLSQCAANGDFSARGDADNFQHDFRVMVESLNTLMATADGNLQSL
SGLLQSIAAGDLTARMSGEFHGVFARMRDDANATATQLAEIVNGIKQSAVSIKGAASEIASGNQDLSQRTEQQAASLEET
AASMEELTSTVKQNAENARQANQLAIGAASVASQGGEIVGKVVQTMSGIEASSKKIADIISVIDGIAFQTNILALNAAVE
AARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKELIDDSVQRVTDGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQE
QSAGIEQVNQTVTQMDETTQQNAALVEEATAAARSLEEQAVGLTQAVAVFKTEHGTTSDARTAPVAKVAQAARAKLATAG
RTAAAKPRALAASTNAETSWQEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=523, Percent_Identity=43.0210325047801, Blast_Score=311, Evalue=1e-85,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=59.4155844155844, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI1788194, Length=292, Percent_Identity=58.5616438356164, Blast_Score=289, Evalue=4e-79,
Organism=Escherichia coli, GI1787690, Length=313, Percent_Identity=55.591054313099, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=44, Blast_Score=203, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 79123; Mature: 79123

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLSLSTQLALGFGTVVLVLLIVATVGVRGQSELSDAVAINDHTYQVIATGRAMTIATV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEEEEEEECCEEEEEEE
NVETGARGFLLSGQEAHLTPYNKGKAQFEEEFTRAKTLTADNPVQQERLQRLHAAYETFM
EECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
GFEDKLLALRRKSSNTELSALLTEFRAGHERAAMEQIRQLLFDFEAQENELLVKRSGTLQ
CCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
AAKARSRWSMIIGSGIAVLVALVSGWLIRRRLINRLGTASHVADSVAAGNLSISVDSSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCC
DETGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDETAFPGDFATIVRGNNDLV
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCHHH
ASHVAVMMRLSQIMGQYAIGDLHEDMEALPGDKAVLSDTMAKVKDNLSSVNREIKHLSQC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AANGDFSARGDADNFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEF
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCH
HGVFARMRDDANATATQLAEIVNGIKQSAVSIKGAASEIASGNQDLSQRTEQQAASLEET
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AASMEELTSTVKQNAENARQANQLAIGAASVASQGGEIVGKVVQTMSGIEASSKKIADII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKELIDDSV
HHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QRVTDGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQ
HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHH
QNAALVEEATAAARSLEEQAVGLTQAVAVFKTEHGTTSDARTAPVAKVAQAARAKLATAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RTAAAKPRALAASTNAETSWQEF
CCCCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MKQLSLSTQLALGFGTVVLVLLIVATVGVRGQSELSDAVAINDHTYQVIATGRAMTIATV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCEEEEEEECCEEEEEEE
NVETGARGFLLSGQEAHLTPYNKGKAQFEEEFTRAKTLTADNPVQQERLQRLHAAYETFM
EECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
GFEDKLLALRRKSSNTELSALLTEFRAGHERAAMEQIRQLLFDFEAQENELLVKRSGTLQ
CCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
AAKARSRWSMIIGSGIAVLVALVSGWLIRRRLINRLGTASHVADSVAAGNLSISVDSSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCC
DETGRLLASMSKMQQQLQKVLHGQQEMKRRHDQGELNFRLDETAFPGDFATIVRGNNDLV
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCHHH
ASHVAVMMRLSQIMGQYAIGDLHEDMEALPGDKAVLSDTMAKVKDNLSSVNREIKHLSQC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AANGDFSARGDADNFQHDFRVMVESLNTLMATADGNLQSLSGLLQSIAAGDLTARMSGEF
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHCCCH
HGVFARMRDDANATATQLAEIVNGIKQSAVSIKGAASEIASGNQDLSQRTEQQAASLEET
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AASMEELTSTVKQNAENARQANQLAIGAASVASQGGEIVGKVVQTMSGIEASSKKIADII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
SVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSSGAAKEIKELIDDSV
HHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QRVTDGSVLVHSAGTTMGEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTVTQMDETTQ
HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHH
QNAALVEEATAAARSLEEQAVGLTQAVAVFKTEHGTTSDARTAPVAKVAQAARAKLATAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
RTAAAKPRALAASTNAETSWQEF
CCCCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]