| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fruA [H]
Identifier: 84624309
GI number: 84624309
Start: 2972517
End: 2974259
Strand: Direct
Name: fruA [H]
Synonym: XOO_2652
Alternate gene names: 84624309
Gene position: 2972517-2974259 (Clockwise)
Preceding gene: 84624308
Following gene: 84624310
Centisome position: 60.17
GC content: 68.5
Gene sequence:
>1743_bases ATGTCCTCTTCCATCGTGGTCATCGCCGCTGGCGAACGCAGCACCGAAGCCGTCCTGGCGGCTGAAGCGCTGCGCCGCGC GGCCACCGCCGCCGGGCGCAGCGTGACGATCGAAATCCGCAGCGACCAAGGCGTACTTGGCGCGCTACCGAGCGAGCTCG CCAGCGGTGCCACCCAGATCTTGGTGGTCGGCGACGCCGATGCCGACACCGCCCGCTTTGGCGATGCGCAACTGGTGCGC CTGAGCCTGGGTGCGGTGTTGGACGACCCGGCCGCCGCGCTGAACCAGCTCGCTGCACCCGCTGCCGCAACCGCATCGAC CGGTGCAGGCGGCGAAAGTGCAAGCAGCAAGCGCATCGTCGCGATCACGTCTTGCCCCACCGGCATCGCGCACACCTTCA TGGCTGCCGAAGGCCTGCAGCAGGCCGCCAAGAAACTCGGCTACCAGATGCGGGTGGAAACCCAGGGCTCGGTGGGTGCG CAGGACGCACTCACCGACGATGAAATCCGCAATGCAGACGTCGTCATCATTGCCGCCGACCGCGAAGTGGACCTGGCCCG CTTCGGCGGCAAGCGCGTGTTCAAGAGCGGCACCAAACCGGCGATCAACGATGGCCCAGCGCTGATCAACAAGGCCCTGG CCGACGCCAGCGTGCAGGGCGGCGCGACGCCGGCCACCGGCACAGCCGCCAGCGCCACGGCGAGCAAGGGCAATAGCCGC ACCGGTGCCTACAAGCACCTGATGACCGGCGTCTCGTTCATGCTGCCCTTCGTCACTGCCGGCGGCCTGCTGATTGCGTT GGCATTTGCGCTGGGCGGCATCTACGCCGGCGACGATGCGCATCAAGGCACGCTGGCCTGGTCGCTGTTCCAGATCGGCG CGAAGGCTGGCTTCACCCTGATGGTGCCTGCCCTGGCTGGCTACATCGCCTACTCCATCGCCGACCGTCCCGGCATCGCG CCCGGCATGATCGGCGGCTTGGTCGCGGCCAATCTCAACGCCGGCTTCCTCGGCGGGATCATCGCCGGCTTCATCGCCGG CTACGGCGTGGCCGCGCTCAACCGCTACATCACGCTGCCGCGCAACCTGGAAGGACTCAAGCCGGTGCTGATCCTGCCAG TGCTGGGCACCCTGCTGGTCGGGCTGGCGATGATGTACGTGTTCGGCCAGCCCGTGGCCGACCTGCTGGCCTGGCTCACC GCCTGGCTGCGCGGCATGCAGGGCAGCAGCGCCTTGCTGCTGGGCTTGTTGCTCGGCGGCATGATGGCGTTCGATATGGG CGGGCCGGTCAACAAGGCGGCCTATGCGTTTTCCACCGGCTTGATCGCCAGCCAGGTCTACACCCCGATGGCCGCCGCCA TGGTGGCCGGCATGACCCCGCCGCTGGGCATCGCGCTGGCGACCTGGGTGTTCCGCAACCGCTTCACCGCCGAAGAACGC GGTTCGGCCACCGCGGCCGGCGTGCTTGGGCTGGCCTTCGTCACCGAAGGCGCCATCCCGTATGCCGCACGCGACCCGCT GCGTACCATCCCGGCGCTGGTGATCGGCTCGGCCGTGGCCGGCGCGATCTCGATGACCGCCGGTGCCGAATTGAAGGCGC CGCATGGCGGCATCTTCGTGCTGCTGATCCCCAACGCCGTCACCCACTTGCTCAATTACGTGCTGGCCCTGGTGGTCGGC GTGGTGGTCACGGCGATCGCGCTGCGCCTGCTCAAGAAGCCGGTTGCCGACGTCGTCGCCTGA
Upstream 100 bases:
>100_bases AGGCAGCGGCACACCTCATGTGCGTCACCGCCCCGCATAACGCTTCAAGAAATTTCCCCGCCGGTGATACCGGCGACCGC AACAGAGCAGGAGTTTTGCC
Downstream 100 bases:
>100_bases TCCAGCAACGGCGGCACGGACCTGCCGCCACACCCGACGCGCCTGCGCTCTACCGCGCGTCCCCCTGACCTGCGTCTACC GCTGCGCTGCGCACCCAGGT
Product: PTS system fructose-specific IIBC component
Products: NA
Alternate protein names: EIIBC-Fru; EII-Fru; Fructose-specific phosphotransferase enzyme IIB component; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MSSSIVVIAAGERSTEAVLAAEALRRAATAAGRSVTIEIRSDQGVLGALPSELASGATQILVVGDADADTARFGDAQLVR LSLGAVLDDPAAALNQLAAPAAATASTGAGGESASSKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGA QDALTDDEIRNADVVIIAADREVDLARFGGKRVFKSGTKPAINDGPALINKALADASVQGGATPATGTAASATASKGNSR TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAYSIADRPGIA PGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYITLPRNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLT AWLRGMQGSSALLLGLLLGGMMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPNAVTHLLNYVLALVVG VVVTAIALRLLKKPVADVVA
Sequences:
>Translated_580_residues MSSSIVVIAAGERSTEAVLAAEALRRAATAAGRSVTIEIRSDQGVLGALPSELASGATQILVVGDADADTARFGDAQLVR LSLGAVLDDPAAALNQLAAPAAATASTGAGGESASSKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGA QDALTDDEIRNADVVIIAADREVDLARFGGKRVFKSGTKPAINDGPALINKALADASVQGGATPATGTAASATASKGNSR TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAYSIADRPGIA PGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYITLPRNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLT AWLRGMQGSSALLLGLLLGGMMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPNAVTHLLNYVLALVVG VVVTAIALRLLKKPVADVVA >Mature_579_residues SSSIVVIAAGERSTEAVLAAEALRRAATAAGRSVTIEIRSDQGVLGALPSELASGATQILVVGDADADTARFGDAQLVRL SLGAVLDDPAAALNQLAAPAAATASTGAGGESASSKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQ DALTDDEIRNADVVIIAADREVDLARFGGKRVFKSGTKPAINDGPALINKALADASVQGGATPATGTAASATASKGNSRT GAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAYSIADRPGIAP GMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYITLPRNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTA WLRGMQGSSALLLGLLLGGMMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEERG SATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPNAVTHLLNYVLALVVGV VVTAIALRLLKKPVADVVA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=464, Percent_Identity=54.0948275862069, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1786951, Length=498, Percent_Identity=36.7469879518072, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI1790386, Length=304, Percent_Identity=47.6973684210526, Blast_Score=243, Evalue=2e-65, Organism=Escherichia coli, GI87082348, Length=472, Percent_Identity=35.5932203389831, Blast_Score=241, Evalue=1e-64, Organism=Escherichia coli, GI1788729, Length=410, Percent_Identity=27.8048780487805, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1790387, Length=95, Percent_Identity=41.0526315789474, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788730, Length=98, Percent_Identity=38.7755102040816, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 58544; Mature: 58413
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSIVVIAAGERSTEAVLAAEALRRAATAAGRSVTIEIRSDQGVLGALPSELASGATQI CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCHHHHCCCCEEE LVVGDADADTARFGDAQLVRLSLGAVLDDPAAALNQLAAPAAATASTGAGGESASSKRIV EEEECCCCCCCCCCCHHEEEEHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEE AITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQDALTDDEIRNADVVIIAAD EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC REVDLARFGGKRVFKSGTKPAINDGPALINKALADASVQGGATPATGTAASATASKGNSR CCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCEE MVPALAGYIAYSIADRPGIAPGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYITLP EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECC RNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTAWLRGMQGSSALLLGLLLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHC GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFV CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEE LLIPNAVTHLLNYVLALVVGVVVTAIALRLLKKPVADVVA EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSSIVVIAAGERSTEAVLAAEALRRAATAAGRSVTIEIRSDQGVLGALPSELASGATQI CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCHHHHCCCCEEE LVVGDADADTARFGDAQLVRLSLGAVLDDPAAALNQLAAPAAATASTGAGGESASSKRIV EEEECCCCCCCCCCCHHEEEEHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEE AITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQDALTDDEIRNADVVIIAAD EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC REVDLARFGGKRVFKSGTKPAINDGPALINKALADASVQGGATPATGTAASATASKGNSR CCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCEE MVPALAGYIAYSIADRPGIAPGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYITLP EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECC RNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTAWLRGMQGSSALLLGLLLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHC GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFV CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEE LLIPNAVTHLLNYVLALVVGVVVTAIALRLLKKPVADVVA EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1655739; 12024217; 1650911 [H]