Click here to switch to the map view.

The map label for this gene is yjiN [H]

Identifier: 84624295

GI number: 84624295

Start: 2946514

End: 2947818

Strand: Direct

Name: yjiN [H]

Synonym: XOO_2638

Alternate gene names: 84624295

Gene position: 2946514-2947818 (Clockwise)

Preceding gene: 84624294

Following gene: 84624296

Centisome position: 59.64

GC content: 61.23

Gene sequence:

>1305_bases
ATGGAACCCAGTCTCAGCACACCCCACCCCATCGATCCCCGTCGTACCCAACTGCAGCGCATGAAGCGATTGGCGTTGGC
CTTGCTGCTGGCAATGTTCGCTGGCTTCATCACCAGCCACCTGATGGGCGAACACGGCGTCTGGGCATGGGTGTCGGCCT
TCTGCGAAGCGGCCACGGTGGGCGCATTGGCTGACTGGTTTGCGGTGGTCGCACTGTTCCGACGCCCGATGGGCCTGCCG
ATTCCGCATACCGCCATCCTGCCACGCGGCAAGGACCGGCTGGCCGACGGCCTGGCCGTGTTCGTGCGCGACCAGTTCCT
CGCCCCCGATGCGTTGATGGAAAAATTGCGTGTGTTCGATCCCGCCAGCCGCCTGGGCGATTGGTTGGCAAAACCCGAAC
AGGCACGCATGCTGGCGCAGATGGCACGCAGCTGGATGCTGCAGGCGCTGGAACTCCTCGACGAAGCGGCAGTCCGCCGC
GCGATTCACGGCTTCGTGGTCGACCGCCTGCGCAAATGGAATGCCGCCGCCACCATCGGCGACATCATGGCGCTGCTCAC
CACCGACGGGCGCCATCAAAAACTGCTGGATGAAGTATTACTGCGGCTGGGCGAATCGCTGGATCAGGAACAGGTCAAGA
CGCGCGCCTCTGCATTGATCGTGCGTTACGCGCGGCGCGAGTGGCCCAAGCTGGTCGGCACCGTGAACTGGGTCAAGCCG
ATCGAAGAGATCGGCGACAGTCTGGCCGACCGCATGGCACGCGCGGCGATCGAAGAACTGCAGGACATCCTCAAGACGCC
CGAGCACCCAATCAGGCTCGACTATGAGGCGTGGTTGCAGGGCTACATCACGCGGCTGCGCGATGAGCCGGAAATGGCCG
TACGCGTGGAAGAACTCAAGCAACGCGCGATCGAACATCCGGCATTGCAGGAATACGTGCAAGATCTCTGGAGCGAAATT
CGCGATGCATTGCGCAACGACCTGGAGCGCGAGCAGTCGTCGATGGCAGCGCACATGGAACGTTCCATGCAATCGCTCGG
CCAGGCCTTGTCGCAAGACCCCTCGCTACGCGAAGCACTCAATCAACATATGTTGCAAGCGGCTGATAAGCTCACCACGC
GCTTGCGCACATCGGTGACCGATCACATTGCATCGACGATGAAAAGTTGGGACGAACGTCACCTCGTCGAACAATTGGAA
TTGGGTGTGGGGCGCGATCTGCAATACATTCGCTTCAATGGAACGTTGGTCGGTGGGTTGATCGGGCTCATCCTTCACGC
GTTGTCGATCTGGCTCTCGTTCTGA

Upstream 100 bases:

>100_bases
TGGAGCACAAGGCACGCAAAACGCGGCCAGCAACCTGCGCGCGCGATGGCGCCACCTGCCGTGGACATGCCCTGGTCAAA
CGACTGGGTACACTTCACCG

Downstream 100 bases:

>100_bases
TGCTGGAAACACCGATCTCCCACTCCGATGAGGTGCAGGCGTAAGGAACTGCACAGCCATAGCATCGTCAGGCGGTACAA
CGAGGTCGACGTACGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MEPSLSTPHPIDPRRTQLQRMKRLALALLLAMFAGFITSHLMGEHGVWAWVSAFCEAATVGALADWFAVVALFRRPMGLP
IPHTAILPRGKDRLADGLAVFVRDQFLAPDALMEKLRVFDPASRLGDWLAKPEQARMLAQMARSWMLQALELLDEAAVRR
AIHGFVVDRLRKWNAAATIGDIMALLTTDGRHQKLLDEVLLRLGESLDQEQVKTRASALIVRYARREWPKLVGTVNWVKP
IEEIGDSLADRMARAAIEELQDILKTPEHPIRLDYEAWLQGYITRLRDEPEMAVRVEELKQRAIEHPALQEYVQDLWSEI
RDALRNDLEREQSSMAAHMERSMQSLGQALSQDPSLREALNQHMLQAADKLTTRLRTSVTDHIASTMKSWDERHLVEQLE
LGVGRDLQYIRFNGTLVGGLIGLILHALSIWLSF

Sequences:

>Translated_434_residues
MEPSLSTPHPIDPRRTQLQRMKRLALALLLAMFAGFITSHLMGEHGVWAWVSAFCEAATVGALADWFAVVALFRRPMGLP
IPHTAILPRGKDRLADGLAVFVRDQFLAPDALMEKLRVFDPASRLGDWLAKPEQARMLAQMARSWMLQALELLDEAAVRR
AIHGFVVDRLRKWNAAATIGDIMALLTTDGRHQKLLDEVLLRLGESLDQEQVKTRASALIVRYARREWPKLVGTVNWVKP
IEEIGDSLADRMARAAIEELQDILKTPEHPIRLDYEAWLQGYITRLRDEPEMAVRVEELKQRAIEHPALQEYVQDLWSEI
RDALRNDLEREQSSMAAHMERSMQSLGQALSQDPSLREALNQHMLQAADKLTTRLRTSVTDHIASTMKSWDERHLVEQLE
LGVGRDLQYIRFNGTLVGGLIGLILHALSIWLSF
>Mature_434_residues
MEPSLSTPHPIDPRRTQLQRMKRLALALLLAMFAGFITSHLMGEHGVWAWVSAFCEAATVGALADWFAVVALFRRPMGLP
IPHTAILPRGKDRLADGLAVFVRDQFLAPDALMEKLRVFDPASRLGDWLAKPEQARMLAQMARSWMLQALELLDEAAVRR
AIHGFVVDRLRKWNAAATIGDIMALLTTDGRHQKLLDEVLLRLGESLDQEQVKTRASALIVRYARREWPKLVGTVNWVKP
IEEIGDSLADRMARAAIEELQDILKTPEHPIRLDYEAWLQGYITRLRDEPEMAVRVEELKQRAIEHPALQEYVQDLWSEI
RDALRNDLEREQSSMAAHMERSMQSLGQALSQDPSLREALNQHMLQAADKLTTRLRTSVTDHIASTMKSWDERHLVEQLE
LGVGRDLQYIRFNGTLVGGLIGLILHALSIWLSF

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=417, Percent_Identity=38.1294964028777, Blast_Score=251, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 49308; Mature: 49308

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSLSTPHPIDPRRTQLQRMKRLALALLLAMFAGFITSHLMGEHGVWAWVSAFCEAATV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GALADWFAVVALFRRPMGLPIPHTAILPRGKDRLADGLAVFVRDQFLAPDALMEKLRVFD
HHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PASRLGDWLAKPEQARMLAQMARSWMLQALELLDEAAVRRAIHGFVVDRLRKWNAAATIG
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIMALLTTDGRHQKLLDEVLLRLGESLDQEQVKTRASALIVRYARREWPKLVGTVNWVKP
HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEIGDSLADRMARAAIEELQDILKTPEHPIRLDYEAWLQGYITRLRDEPEMAVRVEELK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHHH
QRAIEHPALQEYVQDLWSEIRDALRNDLEREQSSMAAHMERSMQSLGQALSQDPSLREAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NQHMLQAADKLTTRLRTSVTDHIASTMKSWDERHLVEQLELGVGRDLQYIRFNGTLVGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
IGLILHALSIWLSF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MEPSLSTPHPIDPRRTQLQRMKRLALALLLAMFAGFITSHLMGEHGVWAWVSAFCEAATV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GALADWFAVVALFRRPMGLPIPHTAILPRGKDRLADGLAVFVRDQFLAPDALMEKLRVFD
HHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PASRLGDWLAKPEQARMLAQMARSWMLQALELLDEAAVRRAIHGFVVDRLRKWNAAATIG
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIMALLTTDGRHQKLLDEVLLRLGESLDQEQVKTRASALIVRYARREWPKLVGTVNWVKP
HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEIGDSLADRMARAAIEELQDILKTPEHPIRLDYEAWLQGYITRLRDEPEMAVRVEELK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHHHHH
QRAIEHPALQEYVQDLWSEIRDALRNDLEREQSSMAAHMERSMQSLGQALSQDPSLREAL
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NQHMLQAADKLTTRLRTSVTDHIASTMKSWDERHLVEQLELGVGRDLQYIRFNGTLVGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
IGLILHALSIWLSF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]