Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is corA [H]

Identifier: 84624270

GI number: 84624270

Start: 2913687

End: 2914688

Strand: Direct

Name: corA [H]

Synonym: XOO_2613

Alternate gene names: 84624270

Gene position: 2913687-2914688 (Clockwise)

Preceding gene: 84624269

Following gene: 84624272

Centisome position: 58.98

GC content: 61.18

Gene sequence:

>1002_bases
ATGAACAATCACGGCCATCACCCCGATAATCCGTCCTGCGTCATCACCTGCGCCTACTACGACGGCGACGGCAAGCGCCA
CGACATCAGCCTGGAACAGATCAGCGATGTGCTGCAGCGTCCCGATGGCTTCGTCTGGGTGGGCCTGTACGAACCGCAGG
AATCGGTGCTGCACAAGTTGCAGGACGAATTCGGCCTTCACGATCTGGCGATCGAAGACGCACTCAAGGCGCATCAGCGA
CCGAAGGCCGAGAGTTACGGCAATTCCTTGTTCGTGGTGGTCAATACCGCGCAGCTGGTCAACGAGCGCATCCGCTATGG
CGAGACGCACGCATTCCTGGGTAAACGCTTCCTGCTGACCGTGCGCCACGGCGCATCGTTGTCGTACGCACCGGTGCGTC
ATCGCGTCGAACGCGAACCGGCAATGCTGCACATGGGTGCGTCGTTCTGCCTGTACGGCGTGCTCGATTTCGTGGTCGAC
AATTACCTGCCGATCATGAACGAGTTCCGCGACACGCTGGAACGCCTGGAAAAAGACATCTTCGCCGATGACTACAAGCG
CGAAACGGTGGTGCGCCTGTATGAGCTCAAGCGCGAACTCAACAAGATGCGCCTGGTGGTTGCACCGCTGCAGGACGTGC
TCTCGCACCTCAAGCGCAACCCCGGCTCACTGATCCACAAAGAAGTGGGCATCTACCTGCGCGACGTGCTCGATCACGCC
GTTCGCACCAGCGATGCCATCGACACCTTGCGCGAAATGCTGGGCACCGCACTGAGCGTCAACCTGTCGATGGTCACGCT
CGCCCAGGGTGAGACCGTCAAACGCCTGGGCGCCTGGGCCGCCCTGCTGGCCGCCCCGACCCTGATCACCAGCTGGTACG
GCATGAATTTCACCCATATGCCAGAGCTCGACGCCCGCTACGCCTACCCACTGCTGGTCGCCGGTATCGTCGGCTCCTGC
CTGGTGTTGTATCGCCTGTTCAAGCGCGCTCGGTGGCTTTAG

Upstream 100 bases:

>100_bases
GCAATGGATCATGCTGCTGTTGCCGATCCACACCGCGCTCGCCCTTGCCCTGCTGGCGCGTGACCTGCCCGTCCGCATAC
GCTGACCGAAGGATGCGCAC

Downstream 100 bases:

>100_bases
GGCCACGTTGCGGCCCGGAATTCGGGATTGGGCATTCGGGATTGGTTTGAGCAGTTGGCTGGTTGTTGATTGTCAACCTG
GCCCAGGATGCCCGTAAGTC

Product: magnesium and cobalt transport protein

Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKLQDEFGLHDLAIEDALKAHQR
PKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLTVRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVD
NYLPIMNEFRDTLERLEKDIFADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA
VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHMPELDARYAYPLLVAGIVGSC
LVLYRLFKRARWL

Sequences:

>Translated_333_residues
MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKLQDEFGLHDLAIEDALKAHQR
PKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLTVRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVD
NYLPIMNEFRDTLERLEKDIFADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA
VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHMPELDARYAYPLLVAGIVGSC
LVLYRLFKRARWL
>Mature_333_residues
MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKLQDEFGLHDLAIEDALKAHQR
PKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLTVRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVD
NYLPIMNEFRDTLERLEKDIFADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA
VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHMPELDARYAYPLLVAGIVGSC
LVLYRLFKRARWL

Specific function: Mediates influx of magnesium ions [H]

COG id: COG0598

COG function: function code P; Mg2+ and Co2+ transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004488
- InterPro:   IPR002523 [H]

Pfam domain/function: PF01544 CorA [H]

EC number: NA

Molecular weight: Translated: 37943; Mature: 37943

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKL
CCCCCCCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHH
QDEFGLHDLAIEDALKAHQRPKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLT
HHHHCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHEEE
VRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVDNYLPIMNEFRDTLERLEKDI
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHM
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PELDARYAYPLLVAGIVGSCLVLYRLFKRARWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKL
CCCCCCCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHH
QDEFGLHDLAIEDALKAHQRPKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLT
HHHHCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHEEE
VRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVDNYLPIMNEFRDTLERLEKDI
EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHM
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PELDARYAYPLLVAGIVGSCLVLYRLFKRARWL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]

Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]