| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is corA [H]
Identifier: 84624270
GI number: 84624270
Start: 2913687
End: 2914688
Strand: Direct
Name: corA [H]
Synonym: XOO_2613
Alternate gene names: 84624270
Gene position: 2913687-2914688 (Clockwise)
Preceding gene: 84624269
Following gene: 84624272
Centisome position: 58.98
GC content: 61.18
Gene sequence:
>1002_bases ATGAACAATCACGGCCATCACCCCGATAATCCGTCCTGCGTCATCACCTGCGCCTACTACGACGGCGACGGCAAGCGCCA CGACATCAGCCTGGAACAGATCAGCGATGTGCTGCAGCGTCCCGATGGCTTCGTCTGGGTGGGCCTGTACGAACCGCAGG AATCGGTGCTGCACAAGTTGCAGGACGAATTCGGCCTTCACGATCTGGCGATCGAAGACGCACTCAAGGCGCATCAGCGA CCGAAGGCCGAGAGTTACGGCAATTCCTTGTTCGTGGTGGTCAATACCGCGCAGCTGGTCAACGAGCGCATCCGCTATGG CGAGACGCACGCATTCCTGGGTAAACGCTTCCTGCTGACCGTGCGCCACGGCGCATCGTTGTCGTACGCACCGGTGCGTC ATCGCGTCGAACGCGAACCGGCAATGCTGCACATGGGTGCGTCGTTCTGCCTGTACGGCGTGCTCGATTTCGTGGTCGAC AATTACCTGCCGATCATGAACGAGTTCCGCGACACGCTGGAACGCCTGGAAAAAGACATCTTCGCCGATGACTACAAGCG CGAAACGGTGGTGCGCCTGTATGAGCTCAAGCGCGAACTCAACAAGATGCGCCTGGTGGTTGCACCGCTGCAGGACGTGC TCTCGCACCTCAAGCGCAACCCCGGCTCACTGATCCACAAAGAAGTGGGCATCTACCTGCGCGACGTGCTCGATCACGCC GTTCGCACCAGCGATGCCATCGACACCTTGCGCGAAATGCTGGGCACCGCACTGAGCGTCAACCTGTCGATGGTCACGCT CGCCCAGGGTGAGACCGTCAAACGCCTGGGCGCCTGGGCCGCCCTGCTGGCCGCCCCGACCCTGATCACCAGCTGGTACG GCATGAATTTCACCCATATGCCAGAGCTCGACGCCCGCTACGCCTACCCACTGCTGGTCGCCGGTATCGTCGGCTCCTGC CTGGTGTTGTATCGCCTGTTCAAGCGCGCTCGGTGGCTTTAG
Upstream 100 bases:
>100_bases GCAATGGATCATGCTGCTGTTGCCGATCCACACCGCGCTCGCCCTTGCCCTGCTGGCGCGTGACCTGCCCGTCCGCATAC GCTGACCGAAGGATGCGCAC
Downstream 100 bases:
>100_bases GGCCACGTTGCGGCCCGGAATTCGGGATTGGGCATTCGGGATTGGTTTGAGCAGTTGGCTGGTTGTTGATTGTCAACCTG GCCCAGGATGCCCGTAAGTC
Product: magnesium and cobalt transport protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKLQDEFGLHDLAIEDALKAHQR PKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLTVRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVD NYLPIMNEFRDTLERLEKDIFADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHMPELDARYAYPLLVAGIVGSC LVLYRLFKRARWL
Sequences:
>Translated_333_residues MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKLQDEFGLHDLAIEDALKAHQR PKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLTVRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVD NYLPIMNEFRDTLERLEKDIFADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHMPELDARYAYPLLVAGIVGSC LVLYRLFKRARWL >Mature_333_residues MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKLQDEFGLHDLAIEDALKAHQR PKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLTVRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVD NYLPIMNEFRDTLERLEKDIFADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHMPELDARYAYPLLVAGIVGSC LVLYRLFKRARWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37943; Mature: 37943
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKL CCCCCCCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHH QDEFGLHDLAIEDALKAHQRPKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLT HHHHCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHEEE VRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVDNYLPIMNEFRDTLERLEKDI EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHM HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PELDARYAYPLLVAGIVGSCLVLYRLFKRARWL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNHGHHPDNPSCVITCAYYDGDGKRHDISLEQISDVLQRPDGFVWVGLYEPQESVLHKL CCCCCCCCCCCCEEEEEEEECCCCCEECCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHH QDEFGLHDLAIEDALKAHQRPKAESYGNSLFVVVNTAQLVNERIRYGETHAFLGKRFLLT HHHHCCHHHHHHHHHHHHCCCCHHHCCCEEEEEEECHHHHHHHHHHCCHHHHHHHHHEEE VRHGASLSYAPVRHRVEREPAMLHMGASFCLYGVLDFVVDNYLPIMNEFRDTLERLEKDI EECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FADDYKRETVVRLYELKRELNKMRLVVAPLQDVLSHLKRNPGSLIHKEVGIYLRDVLDHA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VRTSDAIDTLREMLGTALSVNLSMVTLAQGETVKRLGAWAALLAAPTLITSWYGMNFTHM HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PELDARYAYPLLVAGIVGSCLVLYRLFKRARWL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]