| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is fliG [H]
Identifier: 84624118
GI number: 84624118
Start: 2735527
End: 2736516
Strand: Direct
Name: fliG [H]
Synonym: XOO_2461
Alternate gene names: 84624118
Gene position: 2735527-2736516 (Clockwise)
Preceding gene: 84624117
Following gene: 84624119
Centisome position: 55.37
GC content: 65.35
Gene sequence:
>990_bases ATGAGTGGCGTGCAGCGTGCTGCGGTGTTGTTGCTGTCGCTTGGGGAAAGCGACGCCGCCGAAGTGCTCAAACACATGGA CCCCAAGGAGGTGCAGAAGATCGGCATCGCCATGGCCACCATGACCGGCATCTCGCGCGATCAGGTCGAAAAGGTAATGG ACGACTTCAACGGCGAACTGGCCGGCAAGACCTCGCTGGGCGTGGGCGCCGACGACTACATCCGCAACGTGCTGATCCAG GCGCTGGGCGCCGACAAGGCCGGTGGCCTGATCGACCGCATCCTGCTGGGCCGCAACACCACCGGCCTGGACACCTTGAA GTGGATGGACCCGCGCGCGGTCGCCGACCTGGTACGCAACGAACACCCGCAGATCATCGCGATTGTGATGGCGCATCTGG ACAGCGACCAGGCTGCCGAGGCGCTCAAGTTGCTGCCCGAGCGCACCCGCGCCGACGTGTTGCTGCGCATTGCCACCCTT GACCGGATCCCGCCGAATGCGCTGAGCGAGCTCAACGACATCATGGAGCGTCAGTTTGCCGGCAACCAGAACCTCAAGTC GTCCAACGTCGGCGGCATCAAGGTGGCGGCCAACATCCTCAACTTCCTGGACACCGGCTCCGACCAGGGCGTGCTGGGCG AGATCGGCAAGATCGACGCCGACCTGGCCGGCAAGATCCAGGACCTGATGTTCGTGTTCGACAACCTGGTGGACCTGGAC GACCGCGGCCTGCAGACGCTGCTGCGCGAAGTCTCCGGCGAGCGCTTGGGCTTGGCCCTGCGCGGCGCCGACGTCAAGGT GCGCGAAAAGATCACCCGCAACATGTCCCAGCGCGCGGCCGAAATCCTGCTCGAGGACATGGAAGCGCGCGGCCCGGTGC GCCTGGCCGACGTGGAAGCGGCGCAGAAGGAAATCCTCACCATCGTCCGCCGTCTGGCTGACGAAGGTACCATCAGCCTG GGCGGCGCCGGTGCGGAGGCGATGGTATGA
Upstream 100 bases:
>100_bases GAACGCATGCGTGTTGCACGCGAAGCAGTCAAAGCCGATTCAAAACGTGTTGCACAAGTCGTAAAGGGATGGGTTGCCAG TGAAGCCTGAAACAGAACCG
Downstream 100 bases:
>100_bases ACGACGTGGTCACCCGCTGGCTGGCCCCGGACCTGCACCTGGTCCCGGCCGGGCCGGAAACCGAATTCGACGAAGCGGCC GTTTATGAGCCGGTGCTGCG
Product: flagellar protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSGVQRAAVLLLSLGESDAAEVLKHMDPKEVQKIGIAMATMTGISRDQVEKVMDDFNGELAGKTSLGVGADDYIRNVLIQ ALGADKAGGLIDRILLGRNTTGLDTLKWMDPRAVADLVRNEHPQIIAIVMAHLDSDQAAEALKLLPERTRADVLLRIATL DRIPPNALSELNDIMERQFAGNQNLKSSNVGGIKVAANILNFLDTGSDQGVLGEIGKIDADLAGKIQDLMFVFDNLVDLD DRGLQTLLREVSGERLGLALRGADVKVREKITRNMSQRAAEILLEDMEARGPVRLADVEAAQKEILTIVRRLADEGTISL GGAGAEAMV
Sequences:
>Translated_329_residues MSGVQRAAVLLLSLGESDAAEVLKHMDPKEVQKIGIAMATMTGISRDQVEKVMDDFNGELAGKTSLGVGADDYIRNVLIQ ALGADKAGGLIDRILLGRNTTGLDTLKWMDPRAVADLVRNEHPQIIAIVMAHLDSDQAAEALKLLPERTRADVLLRIATL DRIPPNALSELNDIMERQFAGNQNLKSSNVGGIKVAANILNFLDTGSDQGVLGEIGKIDADLAGKIQDLMFVFDNLVDLD DRGLQTLLREVSGERLGLALRGADVKVREKITRNMSQRAAEILLEDMEARGPVRLADVEAAQKEILTIVRRLADEGTISL GGAGAEAMV >Mature_328_residues SGVQRAAVLLLSLGESDAAEVLKHMDPKEVQKIGIAMATMTGISRDQVEKVMDDFNGELAGKTSLGVGADDYIRNVLIQA LGADKAGGLIDRILLGRNTTGLDTLKWMDPRAVADLVRNEHPQIIAIVMAHLDSDQAAEALKLLPERTRADVLLRIATLD RIPPNALSELNDIMERQFAGNQNLKSSNVGGIKVAANILNFLDTGSDQGVLGEIGKIDADLAGKIQDLMFVFDNLVDLDD RGLQTLLREVSGERLGLALRGADVKVREKITRNMSQRAAEILLEDMEARGPVRLADVEAAQKEILTIVRRLADEGTISLG GAGAEAMV
Specific function: FliG is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Potential). Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=323, Percent_Identity=47.3684210526316, Blast_Score=299, Evalue=2e-82,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 35417; Mature: 35286
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVQRAAVLLLSLGESDAAEVLKHMDPKEVQKIGIAMATMTGISRDQVEKVMDDFNGEL CCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC AGKTSLGVGADDYIRNVLIQALGADKAGGLIDRILLGRNTTGLDTLKWMDPRAVADLVRN CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHC EHPQIIAIVMAHLDSDQAAEALKLLPERTRADVLLRIATLDRIPPNALSELNDIMERQFA CCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GNQNLKSSNVGGIKVAANILNFLDTGSDQGVLGEIGKIDADLAGKIQDLMFVFDNLVDLD CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCC DRGLQTLLREVSGERLGLALRGADVKVREKITRNMSQRAAEILLEDMEARGPVRLADVEA HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH AQKEILTIVRRLADEGTISLGGAGAEAMV HHHHHHHHHHHHHCCCCEEECCCCCCCCC >Mature Secondary Structure SGVQRAAVLLLSLGESDAAEVLKHMDPKEVQKIGIAMATMTGISRDQVEKVMDDFNGEL CHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC AGKTSLGVGADDYIRNVLIQALGADKAGGLIDRILLGRNTTGLDTLKWMDPRAVADLVRN CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHC EHPQIIAIVMAHLDSDQAAEALKLLPERTRADVLLRIATLDRIPPNALSELNDIMERQFA CCCCEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC GNQNLKSSNVGGIKVAANILNFLDTGSDQGVLGEIGKIDADLAGKIQDLMFVFDNLVDLD CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCC DRGLQTLLREVSGERLGLALRGADVKVREKITRNMSQRAAEILLEDMEARGPVRLADVEA HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH AQKEILTIVRRLADEGTISLGGAGAEAMV HHHHHHHHHHHHHCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043; 8675317 [H]