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The map label for this gene is yeaW [H]

Identifier: 84624111

GI number: 84624111

Start: 2725584

End: 2726729

Strand: Direct

Name: yeaW [H]

Synonym: XOO_2454

Alternate gene names: 84624111

Gene position: 2725584-2726729 (Clockwise)

Preceding gene: 84624110

Following gene: 84624112

Centisome position: 55.17

GC content: 56.72

Gene sequence:

>1146_bases
ATGCGCTCGCGGATGCACTCCAAGTATTACTTGTCGCAGGAGATCTTTGAGCGTGAGCAGCGCAAAATCTTCCGTCGGGT
TTGGTTGTTTGCAGGGCTCAAGACACTGCTGCGGGAAAACAACTGCTTCATCACCCGCAAGATCGCGGGCATCCCCCTGG
TGATACAAAACTTCCACGGCCAAATCCGTGCATTCGAAAACGTCTGCCTCCACCGCAGTGCACTGATTCAAACCGGTGCT
ATCGGTTGCCGACCTTTGGTGTGCCCCTACCATGCATGGAGTTACGACGAACAAGGCCGGGTAAGGAACATCCCCGACTG
CGATGCGATCTATCGCCTGGACAAGAGCGAAAAGGACAACTTGAAGCTGCGTGAATTCGCACTGCGCGCCATCGGCAATC
TGCTGTTCGTCAACATCGATCCCGACCCGATGCCGATCGAGGAGCAGTTTTCGGCAGATTTCATCACCTTGCTGGAAAGC
AGTTCCAATGCCTATGACACTGAGGTCATGGTGACCACATGGCGTGGCCGGTACAACTGGAAACTCGCTTACGAGAATCT
TCGGGACGCCAATCACCCGCGCTTTGTCCACCCCAAGACCTTAGCCAAGAGCGTCAGCTTCGTTGCCGAGGTAAACGAAG
AACACGCCAAGCAGTCCATGGAAGCGTTGCAAGACAGCTCGCCCGCTGCCTTGAGACGCGAGATGCGCCGCTTCAGTTTC
GGCGGCCCGGACGCACCCATACCCAACCTTCAACACTTTGGCTGGCACGAGAAAGTGGAACGCTGGGGCACGCAGGATGC
CTACTTCAATTGGTTGGCCTTCCCGAACATGCACATCGCCAGTTCCAATGGCGGGTATTCCTTCACGCTGGAACACCACA
TTCCCGTCGCACCGGACCGGACCGACCTGGAAATCTATTGGTTTAGCGCCCGCAAGAAACAGCCTTACGGCTCTTCCAGC
CAAGTGCTACTGGCGCAGATGCATGGGAGCAAGGTCGTGGTGGGCGAAGACGTGGACATCATGGAGCGGGTGCAGGCGGC
GTTGCACACAGATGCACCCATCCCCACTCAGGGAGCCTACGAATCCATGAATCGGCTGGTCGAGCGCTGGTACGCGCTGC
TGATGGAGACCGAACATGAAATCTAG

Upstream 100 bases:

>100_bases
GGCTGGCGCGGTGGTCTTGAAGGACGTACCGGCCGGAGCCACGGTGTTCGGTAATCCGGCCAAAATTGTGTTCAACAAAA
ACATACCGACAGACTGACCC

Downstream 100 bases:

>100_bases
GTGGATCATCGGCCGCAGCGAGTACCTCGACCTGGCATTTCACGCATGGAAGCAGGCACGTCAGGACGAGATGGTCGTCA
GGATCGAGGTACCACAAGAC

Product: ring hydroxylating dioxygenase alpha-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRSRMHSKYYLSQEIFEREQRKIFRRVWLFAGLKTLLRENNCFITRKIAGIPLVIQNFHGQIRAFENVCLHRSALIQTGA
IGCRPLVCPYHAWSYDEQGRVRNIPDCDAIYRLDKSEKDNLKLREFALRAIGNLLFVNIDPDPMPIEEQFSADFITLLES
SSNAYDTEVMVTTWRGRYNWKLAYENLRDANHPRFVHPKTLAKSVSFVAEVNEEHAKQSMEALQDSSPAALRREMRRFSF
GGPDAPIPNLQHFGWHEKVERWGTQDAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDRTDLEIYWFSARKKQPYGSSS
QVLLAQMHGSKVVVGEDVDIMERVQAALHTDAPIPTQGAYESMNRLVERWYALLMETEHEI

Sequences:

>Translated_381_residues
MRSRMHSKYYLSQEIFEREQRKIFRRVWLFAGLKTLLRENNCFITRKIAGIPLVIQNFHGQIRAFENVCLHRSALIQTGA
IGCRPLVCPYHAWSYDEQGRVRNIPDCDAIYRLDKSEKDNLKLREFALRAIGNLLFVNIDPDPMPIEEQFSADFITLLES
SSNAYDTEVMVTTWRGRYNWKLAYENLRDANHPRFVHPKTLAKSVSFVAEVNEEHAKQSMEALQDSSPAALRREMRRFSF
GGPDAPIPNLQHFGWHEKVERWGTQDAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDRTDLEIYWFSARKKQPYGSSS
QVLLAQMHGSKVVVGEDVDIMERVQAALHTDAPIPTQGAYESMNRLVERWYALLMETEHEI
>Mature_381_residues
MRSRMHSKYYLSQEIFEREQRKIFRRVWLFAGLKTLLRENNCFITRKIAGIPLVIQNFHGQIRAFENVCLHRSALIQTGA
IGCRPLVCPYHAWSYDEQGRVRNIPDCDAIYRLDKSEKDNLKLREFALRAIGNLLFVNIDPDPMPIEEQFSADFITLLES
SSNAYDTEVMVTTWRGRYNWKLAYENLRDANHPRFVHPKTLAKSVSFVAEVNEEHAKQSMEALQDSSPAALRREMRRFSF
GGPDAPIPNLQHFGWHEKVERWGTQDAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDRTDLEIYWFSARKKQPYGSSS
QVLLAQMHGSKVVVGEDVDIMERVQAALHTDAPIPTQGAYESMNRLVERWYALLMETEHEI

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=195, Percent_Identity=27.1794871794872, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788888, Length=207, Percent_Identity=26.5700483091787, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 44180; Mature: 44180

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRMHSKYYLSQEIFEREQRKIFRRVWLFAGLKTLLRENNCFITRKIAGIPLVIQNFHG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
QIRAFENVCLHRSALIQTGAIGCRPLVCPYHAWSYDEQGRVRNIPDCDAIYRLDKSEKDN
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
LKLREFALRAIGNLLFVNIDPDPMPIEEQFSADFITLLESSSNAYDTEVMVTTWRGRYNW
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCEEE
KLAYENLRDANHPRFVHPKTLAKSVSFVAEVNEEHAKQSMEALQDSSPAALRREMRRFSF
EEEECHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GGPDAPIPNLQHFGWHEKVERWGTQDAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDR
CCCCCCCCCCCCCCHHHHHHHCCCCCHHEEEEECCCEEEEECCCCEEEEEECCCCCCCCC
TDLEIYWFSARKKQPYGSSSQVLLAQMHGSKVVVGEDVDIMERVQAALHTDAPIPTQGAY
CCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHH
ESMNRLVERWYALLMETEHEI
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSRMHSKYYLSQEIFEREQRKIFRRVWLFAGLKTLLRENNCFITRKIAGIPLVIQNFHG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCC
QIRAFENVCLHRSALIQTGAIGCRPLVCPYHAWSYDEQGRVRNIPDCDAIYRLDKSEKDN
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
LKLREFALRAIGNLLFVNIDPDPMPIEEQFSADFITLLESSSNAYDTEVMVTTWRGRYNW
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCEEE
KLAYENLRDANHPRFVHPKTLAKSVSFVAEVNEEHAKQSMEALQDSSPAALRREMRRFSF
EEEECHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GGPDAPIPNLQHFGWHEKVERWGTQDAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDR
CCCCCCCCCCCCCCHHHHHHHCCCCCHHEEEEECCCEEEEECCCCEEEEEECCCCCCCCC
TDLEIYWFSARKKQPYGSSSQVLLAQMHGSKVVVGEDVDIMERVQAALHTDAPIPTQGAY
CCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHH
ESMNRLVERWYALLMETEHEI
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]