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The map label for this gene is fliD [H]

Identifier: 84624097

GI number: 84624097

Start: 2713894

End: 2715216

Strand: Direct

Name: fliD [H]

Synonym: XOO_2440

Alternate gene names: 84624097

Gene position: 2713894-2715216 (Clockwise)

Preceding gene: 84624096

Following gene: 84624098

Centisome position: 54.93

GC content: 64.17

Gene sequence:

>1323_bases
ATGGCATCGGTGATCAGCACTTCCGCCTCCGGATTGGATATCCCTACCGTGGTGTCTACCCTGGTGTCCCGGCAGAGAGA
CCCCGAGCAGGCACGCATCAACAAGGCCGGCACCGCCGCGACGACGCAATTGTCGGCAATCAGCCAGATCAAGAGCAGCA
TGACCACGCTCCAGTCTGCGCTGGACAAAGTGGTCAGCAGCGCCGACACCAACGCCTACAAGGCCACGGTGCCGACCGAT
GCCGGCTTCACCGCCACCACCACCAGCTCGGCGGCGCCGGGCAACTATTCGGTTGAAGTGGTGTCGCTGGCGAGCTCGCA
AAACTGGCCTCGGCGCGTTAAGGCCGATGCCACGGTGGGTAGCGGCACGCTGACGATCGGCTACGGCGACAACAGCGTCA
CCGTGGATATCAGCGGCACCGACAAGCTCACCGACATCGCGGCGGCCATCAACAAGGCCGCCGGCGGCAAGGGCGTCACT
GCCAGCGTGGTGACCGCCAACGATGGCCAGCATCTGGTCTTCAATGCGGTCGATTCCGGCACCAAGGGCGCCCTGACCAT
CAGCGCCAGCGACCCGAGCCTGAGCAGCCTCACCTACGGCCCCGGCGTCACCGGCGGGCTGAACCAGACCGTGGCAGCCG
CCGACGCACGGGTGCGCGTGGACGGCTTCGAGCGCACCTCCAGCTCCGACACCATCAGCGACATCGTGCCCGGCGTGGTG
CTCAACCTCACCAAGGCCGCTGAAGGCACCAAGTTCAATCTTGGCGTGGCAGCCGACACCAGCGGGCTCAAGGGTAACCT
CACCGCCTTCGCTGCGGCCTACAACACCGCCAACACGTTGCTGGCGAAAAGCAGCAGTTACGACGCCACCACCAAGACCG
CCTCGGCGCTGACCGGCGATTCGCTGGTGCGCAGCCTGCAACAACAGCTGCGCGGTCAGGTCAGCGGCAGCGTCACCGAA
CTCAAGGCCCTCGGCCTGACCATCGACAAGGATGGCGTGATGAGTTTCGATGGCAGCAAGTTCGACACCGCCATCGCCTC
CGACGGTGGCGCGGCGGCCGATGTGTTTGGCAAGGACAGCAAGTTTGGTGGCAACCTGACCAAGCTGCTGGACAGCAACG
TCAATGCAACCAACGGCACGCTGACCCTGCGCTCGGACAGTTTGAACAAGACCATCAAGGGCTACGAATCGGACCTGGAC
GATCTCGATGCGCGCATGGAAAAACTCAGCGACCGCTACACCGCGCAGTTCGCCGCGATGGACGCCATGATCAGCAAGTT
GCAAGGCAGCACTAGCTCGCTCAGCGGCCTGCTGACAGGCTGA

Upstream 100 bases:

>100_bases
TGACCTATCGCTGCCGCTAAAGTCCTCGCGGATGCGGCCGATACCGGTCACGTAATCCCATGCGTCTGTCTGTTTCGGAC
GCCCAGACGAGGAATGCAAC

Downstream 100 bases:

>100_bases
TTTGCGTGATGAATATCCTCAAGTCCTGTCAGGGTATTGCCGATAAAAGAAGGGCCTATCGTGATTTCGGCCTTGCCTTC
CGGCAGGAGCGTCGTCGCAG

Product: flagellar protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MASVISTSASGLDIPTVVSTLVSRQRDPEQARINKAGTAATTQLSAISQIKSSMTTLQSALDKVVSSADTNAYKATVPTD
AGFTATTTSSAAPGNYSVEVVSLASSQNWPRRVKADATVGSGTLTIGYGDNSVTVDISGTDKLTDIAAAINKAAGGKGVT
ASVVTANDGQHLVFNAVDSGTKGALTISASDPSLSSLTYGPGVTGGLNQTVAAADARVRVDGFERTSSSDTISDIVPGVV
LNLTKAAEGTKFNLGVAADTSGLKGNLTAFAAAYNTANTLLAKSSSYDATTKTASALTGDSLVRSLQQQLRGQVSGSVTE
LKALGLTIDKDGVMSFDGSKFDTAIASDGGAAADVFGKDSKFGGNLTKLLDSNVNATNGTLTLRSDSLNKTIKGYESDLD
DLDARMEKLSDRYTAQFAAMDAMISKLQGSTSSLSGLLTG

Sequences:

>Translated_440_residues
MASVISTSASGLDIPTVVSTLVSRQRDPEQARINKAGTAATTQLSAISQIKSSMTTLQSALDKVVSSADTNAYKATVPTD
AGFTATTTSSAAPGNYSVEVVSLASSQNWPRRVKADATVGSGTLTIGYGDNSVTVDISGTDKLTDIAAAINKAAGGKGVT
ASVVTANDGQHLVFNAVDSGTKGALTISASDPSLSSLTYGPGVTGGLNQTVAAADARVRVDGFERTSSSDTISDIVPGVV
LNLTKAAEGTKFNLGVAADTSGLKGNLTAFAAAYNTANTLLAKSSSYDATTKTASALTGDSLVRSLQQQLRGQVSGSVTE
LKALGLTIDKDGVMSFDGSKFDTAIASDGGAAADVFGKDSKFGGNLTKLLDSNVNATNGTLTLRSDSLNKTIKGYESDLD
DLDARMEKLSDRYTAQFAAMDAMISKLQGSTSSLSGLLTG
>Mature_439_residues
ASVISTSASGLDIPTVVSTLVSRQRDPEQARINKAGTAATTQLSAISQIKSSMTTLQSALDKVVSSADTNAYKATVPTDA
GFTATTTSSAAPGNYSVEVVSLASSQNWPRRVKADATVGSGTLTIGYGDNSVTVDISGTDKLTDIAAAINKAAGGKGVTA
SVVTANDGQHLVFNAVDSGTKGALTISASDPSLSSLTYGPGVTGGLNQTVAAADARVRVDGFERTSSSDTISDIVPGVVL
NLTKAAEGTKFNLGVAADTSGLKGNLTAFAAAYNTANTLLAKSSSYDATTKTASALTGDSLVRSLQQQLRGQVSGSVTEL
KALGLTIDKDGVMSFDGSKFDTAIASDGGAAADVFGKDSKFGGNLTKLLDSNVNATNGTLTLRSDSLNKTIKGYESDLDD
LDARMEKLSDRYTAQFAAMDAMISKLQGSTSSLSGLLTG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=473, Percent_Identity=30.4439746300211, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 44715; Mature: 44584

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVISTSASGLDIPTVVSTLVSRQRDPEQARINKAGTAATTQLSAISQIKSSMTTLQSA
CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDKVVSSADTNAYKATVPTDAGFTATTTSSAAPGNYSVEVVSLASSQNWPRRVKADATVG
HHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEC
SGTLTIGYGDNSVTVDISGTDKLTDIAAAINKAAGGKGVTASVVTANDGQHLVFNAVDSG
CCEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCC
TKGALTISASDPSLSSLTYGPGVTGGLNQTVAAADARVRVDGFERTSSSDTISDIVPGVV
CCCEEEEECCCCCCCCEECCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCHHHHHHCHHH
LNLTKAAEGTKFNLGVAADTSGLKGNLTAFAAAYNTANTLLAKSSSYDATTKTASALTGD
HHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEHHCCHHHHEECCCCCCCCHHHHHHHHHH
SLVRSLQQQLRGQVSGSVTELKALGLTIDKDGVMSFDGSKFDTAIASDGGAAADVFGKDS
HHHHHHHHHHHHHHCCCHHHHHEECEEECCCCCEECCCCCCCHHEECCCCCEEHHCCCCC
KFGGNLTKLLDSNVNATNGTLTLRSDSLNKTIKGYESDLDDLDARMEKLSDRYTAQFAAM
CCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DAMISKLQGSTSSLSGLLTG
HHHHHHHCCCHHHCCCCCCC
>Mature Secondary Structure 
ASVISTSASGLDIPTVVSTLVSRQRDPEQARINKAGTAATTQLSAISQIKSSMTTLQSA
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDKVVSSADTNAYKATVPTDAGFTATTTSSAAPGNYSVEVVSLASSQNWPRRVKADATVG
HHHHHHCCCCCCEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEC
SGTLTIGYGDNSVTVDISGTDKLTDIAAAINKAAGGKGVTASVVTANDGQHLVFNAVDSG
CCEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCC
TKGALTISASDPSLSSLTYGPGVTGGLNQTVAAADARVRVDGFERTSSSDTISDIVPGVV
CCCEEEEECCCCCCCCEECCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCHHHHHHCHHH
LNLTKAAEGTKFNLGVAADTSGLKGNLTAFAAAYNTANTLLAKSSSYDATTKTASALTGD
HHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEHHCCHHHHEECCCCCCCCHHHHHHHHHH
SLVRSLQQQLRGQVSGSVTELKALGLTIDKDGVMSFDGSKFDTAIASDGGAAADVFGKDS
HHHHHHHHHHHHHHCCCHHHHHEECEEECCCCCEECCCCCCCHHEECCCCCEEHHCCCCC
KFGGNLTKLLDSNVNATNGTLTLRSDSLNKTIKGYESDLDDLDARMEKLSDRYTAQFAAM
CCCCHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
DAMISKLQGSTSSLSGLLTG
HHHHHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]