| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is aat [H]
Identifier: 84624067
GI number: 84624067
Start: 2679947
End: 2680744
Strand: Direct
Name: aat [H]
Synonym: XOO_2410
Alternate gene names: 84624067
Gene position: 2679947-2680744 (Clockwise)
Preceding gene: 84624066
Following gene: 84624068
Centisome position: 54.25
GC content: 66.42
Gene sequence:
>798_bases ATGCCCGCACGGCACGCTGCGGCGATCCGGCCGGTGGCCAGCGTCGTGACGCCCTTTCGCCGTCCCATCGTGCTGGCAAC GTCCGCCTCGGCCCCATTCCCGCCTGCCGAGGCCGCCCTGACCGATCCCGACGGACTACTTGCCGTCGGCGGAGATCTGT CGCCACAGCGTCTGCTCAACGCGTACGCGCATGGCATTTTCCCGTGGTACTCGGATGGCCGACCGATCCTGTGGTGGAGC CCCGACCCGCGCATGGTCTTTCGCACCGACGGCGTGCGCCTGTCTTCCCGCTTCAAGCGCCAGCTCCGCGCAAGCACCTG GACGGTTCGCGCCGACACCGCCTTCGAACAGGTGATCGATGCCTGCGCTGCGAGTCCGCGCCCCGGCCAGGACGGCACCT GGATCACCGCGGAGATGCAGCAGGCCTATATCGCCTTGCACCGTCTAGGCCACGCGCATTCGATCGAGGTATTCGACGGC GCGCGCCTGGTCGGCGGGATCTACGGCGTCGCGGTCGGCCGGATGTTTTTTGGCGAAAGCATGTTCAGTGGGGAAAGCGG CGGTTCCAAGGTGGCACTGGCCGCCTTGGCCGCCGATCTGCATGGCCGAGGATGGCCACTGATCGATGCACAGGTGGAAA ACCCGCACCTGCTGAGCATGGGTGCCGAACGCTTGCCGCGCGCAGAGTTTTTGCACGACGTGCAACGCCAAGTTGCCCTG GCGGAACAGCCGGGCAGCTGGTCTCAGCGTTACGGCGAACACGCCGCCAGCGACCTGTGTGAGACCCACTTAACATAA
Upstream 100 bases:
>100_bases CGATGGGCTTGAGCCGGCTGGGTGCTCCGCAGGCGCACCTGTACCATCGCCGGATCCGAACCAGGCACCTGCCCATGCCC TTTACCGCTTCATTATTTCC
Downstream 100 bases:
>100_bases AATTTGCGCCGCGGGGAGATGGCGCGTAAAATGCCGTCCCTTACGGCCCTGCCGGGCCAGCCGTGATTGCACAGGATTAC ATGTCGAAAGACGACTCCAT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPARHAAAIRPVASVVTPFRRPIVLATSASAPFPPAEAALTDPDGLLAVGGDLSPQRLLNAYAHGIFPWYSDGRPILWWS PDPRMVFRTDGVRLSSRFKRQLRASTWTVRADTAFEQVIDACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDG ARLVGGIYGVAVGRMFFGESMFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVAL AEQPGSWSQRYGEHAASDLCETHLT
Sequences:
>Translated_265_residues MPARHAAAIRPVASVVTPFRRPIVLATSASAPFPPAEAALTDPDGLLAVGGDLSPQRLLNAYAHGIFPWYSDGRPILWWS PDPRMVFRTDGVRLSSRFKRQLRASTWTVRADTAFEQVIDACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDG ARLVGGIYGVAVGRMFFGESMFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVAL AEQPGSWSQRYGEHAASDLCETHLT >Mature_264_residues PARHAAAIRPVASVVTPFRRPIVLATSASAPFPPAEAALTDPDGLLAVGGDLSPQRLLNAYAHGIFPWYSDGRPILWWSP DPRMVFRTDGVRLSSRFKRQLRASTWTVRADTAFEQVIDACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDGA RLVGGIYGVAVGRMFFGESMFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVALA EQPGSWSQRYGEHAASDLCETHLT
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=225, Percent_Identity=48.4444444444444, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 28770; Mature: 28639
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARHAAAIRPVASVVTPFRRPIVLATSASAPFPPAEAALTDPDGLLAVGGDLSPQRLLN CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHH AYAHGIFPWYSDGRPILWWSPDPRMVFRTDGVRLSSRFKRQLRASTWTVRADTAFEQVID HHHHHCCCEECCCCEEEEECCCCCEEEEECCEEHHHHHHHHHHHHHEEEECHHHHHHHHH ACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDGARLVGGIYGVAVGRMFFGES HHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCH MFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVAL HCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCHHHCCHHHHHHHHHHHHHH AEQPGSWSQRYGEHAASDLCETHLT HCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PARHAAAIRPVASVVTPFRRPIVLATSASAPFPPAEAALTDPDGLLAVGGDLSPQRLLN CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHH AYAHGIFPWYSDGRPILWWSPDPRMVFRTDGVRLSSRFKRQLRASTWTVRADTAFEQVID HHHHHCCCEECCCCEEEEECCCCCEEEEECCEEHHHHHHHHHHHHHEEEECHHHHHHHHH ACAASPRPGQDGTWITAEMQQAYIALHRLGHAHSIEVFDGARLVGGIYGVAVGRMFFGES HHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCH MFSGESGGSKVALAALAADLHGRGWPLIDAQVENPHLLSMGAERLPRAEFLHDVQRQVAL HCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCHHHCCHHHHHHHHHHHHHH AEQPGSWSQRYGEHAASDLCETHLT HCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA