| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623789
Identifier: 84623789
GI number: 84623789
Start: 2363068
End: 2364141
Strand: Direct
Name: 84623789
Synonym: XOO_2132
Alternate gene names: NA
Gene position: 2363068-2364141 (Clockwise)
Preceding gene: 84623783
Following gene: 84623790
Centisome position: 47.83
GC content: 59.78
Gene sequence:
>1074_bases GTGAGGCCGCTTCTCGCCCTTTGCCTACCCTTTTCACCGGTCGCAGCCTGCAATCAGACTGGTGCAGGCCCGGCGGAACC GGGTGGCCCGAGCAGTAACACGGGCCAAAAGTCTCAGACCCTCGAAGGTCTCTCGAAGCCGATTATCGATTTCTGCACTT TGGTTTTTGACACCGACAAGGCGATCAAGCTGCTCAAGCGCATGAACGGCCAGCAGATCGTCGCCTACGTCTTCGGGACA TCTGGGAGCATCGTTGCTGGCCCCCTGCAGGAGCGGTTGTGGAACTTCAAGTACCAGCGCAGCGCCACGCTGATCGATGA AACCTCAAGCGTGTGTGGTCGTATTGGTGTCGCTGATACTGGCGAGGTCTGCATCAGCCTGACAGGGCAGGGCTGTAGCC AGGTTCCCAGTTGGCCGTATGTAGAGCGCATTGCCCAGGACCTCGGCGCACATTTGACCCGTGTCGATATCGCCATCGAT GACCACGCTGGCAAGTGGTTCGATGTGCAGCAGTTCCGCGACGCCTACCACGATGGCGCCTTCACCATGAACGGCCGACC GCCTCACGCCAAGCACATCAGCGACGAGGGCAACGCCAAGGGTTGCAGCTTCTACGTTGGCCAGAAGGGTCACAAAGAGC TGTGCATTTACGAGAAGGGCAAGCAGCTCGGCGACCCTGACAGCGACTGGACACGCTGTGAATTGCGTCTGTACGCCAAG CGCATCGATCTGCCGCTGGGCGCTCTGGTCGATCCGGGTAAGTACTTCGCGGGTGCGTACACGGTGCTTGCCGACCTTGT CATCGGCGAACTGACGCGCCTGCAGCTCAAGGAGCGCATGGTCAATCCGTCCGTCAAAGCCATGGTCGATTTCATCGACA CCCAGGCGGGCAGTGCCCTGCGTGTTCTGTGGAACGCGCTCAACACGCGCAGCCACGAATATGCGGTTGCCGTGCTGGAT CGATATCTCACGCACGACGGTGTACCGGGGCGTTTCAAGAACCTGCAACAGCTCGATCTGGAGATACGGATCTCCAACCA GTTGGATGAGCTGTTCCCGGAGTGCGCCGACTGA
Upstream 100 bases:
>100_bases TCATTGCGTGCTTGATGATCGCCGGGTTCGTCCTCTTCGCTGTTTTCGTACCCCTCGCATTGGTCTCGGCATTTGTCACC TTCGTTCGTGAGTGTGACCT
Downstream 100 bases:
>100_bases AATTCGCTGCGCGTCGTTATGGCCACCGACGTGGGTAACAGCAAATGTGGTCAAGAGAATCTCCCGGATCGTCGGGATCA ATCAAACCTAAAAAGGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Replication Protein; Phage Replication Initiation Factor; Phage Replication Initiation Protein; Replication Initiation Factor Family; Phage Replication Protein RstA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MRPLLALCLPFSPVAACNQTGAGPAEPGGPSSNTGQKSQTLEGLSKPIIDFCTLVFDTDKAIKLLKRMNGQQIVAYVFGT SGSIVAGPLQERLWNFKYQRSATLIDETSSVCGRIGVADTGEVCISLTGQGCSQVPSWPYVERIAQDLGAHLTRVDIAID DHAGKWFDVQQFRDAYHDGAFTMNGRPPHAKHISDEGNAKGCSFYVGQKGHKELCIYEKGKQLGDPDSDWTRCELRLYAK RIDLPLGALVDPGKYFAGAYTVLADLVIGELTRLQLKERMVNPSVKAMVDFIDTQAGSALRVLWNALNTRSHEYAVAVLD RYLTHDGVPGRFKNLQQLDLEIRISNQLDELFPECAD
Sequences:
>Translated_357_residues MRPLLALCLPFSPVAACNQTGAGPAEPGGPSSNTGQKSQTLEGLSKPIIDFCTLVFDTDKAIKLLKRMNGQQIVAYVFGT SGSIVAGPLQERLWNFKYQRSATLIDETSSVCGRIGVADTGEVCISLTGQGCSQVPSWPYVERIAQDLGAHLTRVDIAID DHAGKWFDVQQFRDAYHDGAFTMNGRPPHAKHISDEGNAKGCSFYVGQKGHKELCIYEKGKQLGDPDSDWTRCELRLYAK RIDLPLGALVDPGKYFAGAYTVLADLVIGELTRLQLKERMVNPSVKAMVDFIDTQAGSALRVLWNALNTRSHEYAVAVLD RYLTHDGVPGRFKNLQQLDLEIRISNQLDELFPECAD >Mature_357_residues MRPLLALCLPFSPVAACNQTGAGPAEPGGPSSNTGQKSQTLEGLSKPIIDFCTLVFDTDKAIKLLKRMNGQQIVAYVFGT SGSIVAGPLQERLWNFKYQRSATLIDETSSVCGRIGVADTGEVCISLTGQGCSQVPSWPYVERIAQDLGAHLTRVDIAID DHAGKWFDVQQFRDAYHDGAFTMNGRPPHAKHISDEGNAKGCSFYVGQKGHKELCIYEKGKQLGDPDSDWTRCELRLYAK RIDLPLGALVDPGKYFAGAYTVLADLVIGELTRLQLKERMVNPSVKAMVDFIDTQAGSALRVLWNALNTRSHEYAVAVLD RYLTHDGVPGRFKNLQQLDLEIRISNQLDELFPECAD
Specific function: Unknown
COG id: COG2946
COG function: function code L; Putative phage replication protein RstA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39236; Mature: 39236
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLLALCLPFSPVAACNQTGAGPAEPGGPSSNTGQKSQTLEGLSKPIIDFCTLVFDTDK CCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH AIKLLKRMNGQQIVAYVFGTSGSIVAGPLQERLWNFKYQRSATLIDETSSVCGRIGVADT HHHHHHHCCCCEEEEEEECCCCCEEECHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCC GEVCISLTGQGCSQVPSWPYVERIAQDLGAHLTRVDIAIDDHAGKWFDVQQFRDAYHDGA CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHCCCC FTMNGRPPHAKHISDEGNAKGCSFYVGQKGHKELCIYEKGKQLGDPDSDWTRCELRLYAK EEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH RIDLPLGALVDPGKYFAGAYTVLADLVIGELTRLQLKERMVNPSVKAMVDFIDTQAGSAL HHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH RVLWNALNTRSHEYAVAVLDRYLTHDGVPGRFKNLQQLDLEIRISNQLDELFPECAD HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHEEEEEEECHHHHHHCCCCCC >Mature Secondary Structure MRPLLALCLPFSPVAACNQTGAGPAEPGGPSSNTGQKSQTLEGLSKPIIDFCTLVFDTDK CCCHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH AIKLLKRMNGQQIVAYVFGTSGSIVAGPLQERLWNFKYQRSATLIDETSSVCGRIGVADT HHHHHHHCCCCEEEEEEECCCCCEEECHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCCC GEVCISLTGQGCSQVPSWPYVERIAQDLGAHLTRVDIAIDDHAGKWFDVQQFRDAYHDGA CCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHCCCC FTMNGRPPHAKHISDEGNAKGCSFYVGQKGHKELCIYEKGKQLGDPDSDWTRCELRLYAK EEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH RIDLPLGALVDPGKYFAGAYTVLADLVIGELTRLQLKERMVNPSVKAMVDFIDTQAGSAL HHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHH RVLWNALNTRSHEYAVAVLDRYLTHDGVPGRFKNLQQLDLEIRISNQLDELFPECAD HHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHEEEEEEECHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA