| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is hisD [H]
Identifier: 84623776
GI number: 84623776
Start: 2345383
End: 2346678
Strand: Direct
Name: hisD [H]
Synonym: XOO_2119
Alternate gene names: 84623776
Gene position: 2345383-2346678 (Clockwise)
Preceding gene: 84623775
Following gene: 84623777
Centisome position: 47.48
GC content: 66.36
Gene sequence:
>1296_bases ATGAAGATTCTCGATTGGTCACAACTCGATGTCGCCGCACGGACCGATGCGTTGACTCGCCCGGTGCAGACCGTGGCCGC ACAGACGCGCAATGCGGTCGCCGCGTTGATTGCCGACGTGCGCACGCGCGGCGATGCGGCATTGCGCGAGATCACCGCGC GCTTCGATGGCGTGTCGCTGGAGCGCTTCGCAGTGAGCGAAGCCGAATTCGCCGCCGCCGAAGCGGCCGTTGCGCCGGAA CTGCGCCAGGCCATGCAGGATGCCGTGGCACGCATCGACACCTTCCACCGCGCTGGCATGAGCGAAGGTTATGCGGTGGA AACCGCGCCGGGTGTGGTGTGCGAAAAGATCGTGCGGCCGATCGGCCGTGTGGGCCTGTACGTGCCGGCCGGCAGCGCGC CGTTGCCGTCGACGGCCTTGATGTTGGGCGTTCCGGCGCGTCTGGCCGGTTGCCGCGCGGTGGTGTTGTGTACGCCGCCG CGCAAGGACGGTAGCGTGGATCCGGCAGTGCTGGTCGCGGCGTGGCTCACCGGCGTGCGCCGTGTGTTCAAGCTCGGCGG TGCGCAGGCGATTGCGGCGATGGCGTATGGCACCGAGTCGGTGCCCAGCTGCGACAAGTTGTTCGGCCCGGGCAACAGCT ATGTCACCGAAGCCAAGCAGCAGGTGGCGCAGTCCGGTGCGGCGGCGATCGACATGCCGGCCGGCCCGTCCGAAGTCTTG GTGATCGCCGATGCCGGCGCGCAAGCGGCGTTCGTGGCTGCCGACCTGCTATCGCAGGCCGAACACGGCGCGGATTCGCA GGTGTTGTTGCTGTCCGACAGCGACGTGTTGATCGATGCGGTGCAGGCGCAGCTGGAGATACAGCTGGCGCATCTCTCAC GTGCCGACATCGCGCGTCAGGCGCTGGCGCAATCGCGCTTGATCAAGGTGCAGACGCTGGATGAGGCGTTTGCGATCAGC AACCGCTATGCGCCGGAGCATCTGATTCTTGCGCTGCGCGAACCGCGCGCGTGGCTGGCGCAAGTCGAGGCAGCCGGCTC GGTATTTCTCGGCGATTACACACCCGAAGCACTCGGCGATTATTGCAGTGGCACCAACCACGTGTTGCCGACCAGCGGTG CGGCGCGCGCGTATAGCGGCGTCAGCGTGGCCAGTTTCCAGAACATGTTCAGCGTGCAGGCGGCCAGCAAGGCCGGCATC GCTGGCATTGGTGAATGCGCGTTGATACTCGCGCGCGCAGAAGGCTTGGACGCGCATGCCAATGCAGTAGCACTGCGCAT GGGAGTGGCAGCATGA
Upstream 100 bases:
>100_bases AGACCATGTGCCACGGTGCGGTGACCTGGCAACGCCTGGAAGAACTCGAACGCGCAGGTGCGCAAGGCTTGATGGTATTG ACGGTGGAGCGCTCGCTGGC
Downstream 100 bases:
>100_bases GCACGTCATCTATTCTGCATCTCGTGCGCGAAGATCTGCGCGCGTTCGCAGGATATTCGTCGGCGCGCACCAGCGCATTG CAGGGCGATGTGTGGCTCAA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKILDWSQLDVAARTDALTRPVQTVAAQTRNAVAALIADVRTRGDAALREITARFDGVSLERFAVSEAEFAAAEAAVAPE LRQAMQDAVARIDTFHRAGMSEGYAVETAPGVVCEKIVRPIGRVGLYVPAGSAPLPSTALMLGVPARLAGCRAVVLCTPP RKDGSVDPAVLVAAWLTGVRRVFKLGGAQAIAAMAYGTESVPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL VIADAGAQAAFVAADLLSQAEHGADSQVLLLSDSDVLIDAVQAQLEIQLAHLSRADIARQALAQSRLIKVQTLDEAFAIS NRYAPEHLILALREPRAWLAQVEAAGSVFLGDYTPEALGDYCSGTNHVLPTSGAARAYSGVSVASFQNMFSVQAASKAGI AGIGECALILARAEGLDAHANAVALRMGVAA
Sequences:
>Translated_431_residues MKILDWSQLDVAARTDALTRPVQTVAAQTRNAVAALIADVRTRGDAALREITARFDGVSLERFAVSEAEFAAAEAAVAPE LRQAMQDAVARIDTFHRAGMSEGYAVETAPGVVCEKIVRPIGRVGLYVPAGSAPLPSTALMLGVPARLAGCRAVVLCTPP RKDGSVDPAVLVAAWLTGVRRVFKLGGAQAIAAMAYGTESVPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL VIADAGAQAAFVAADLLSQAEHGADSQVLLLSDSDVLIDAVQAQLEIQLAHLSRADIARQALAQSRLIKVQTLDEAFAIS NRYAPEHLILALREPRAWLAQVEAAGSVFLGDYTPEALGDYCSGTNHVLPTSGAARAYSGVSVASFQNMFSVQAASKAGI AGIGECALILARAEGLDAHANAVALRMGVAA >Mature_431_residues MKILDWSQLDVAARTDALTRPVQTVAAQTRNAVAALIADVRTRGDAALREITARFDGVSLERFAVSEAEFAAAEAAVAPE LRQAMQDAVARIDTFHRAGMSEGYAVETAPGVVCEKIVRPIGRVGLYVPAGSAPLPSTALMLGVPARLAGCRAVVLCTPP RKDGSVDPAVLVAAWLTGVRRVFKLGGAQAIAAMAYGTESVPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL VIADAGAQAAFVAADLLSQAEHGADSQVLLLSDSDVLIDAVQAQLEIQLAHLSRADIARQALAQSRLIKVQTLDEAFAIS NRYAPEHLILALREPRAWLAQVEAAGSVFLGDYTPEALGDYCSGTNHVLPTSGAARAYSGVSVASFQNMFSVQAASKAGI AGIGECALILARAEGLDAHANAVALRMGVAA
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=427, Percent_Identity=51.288056206089, Blast_Score=413, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6319819, Length=433, Percent_Identity=46.8822170900693, Blast_Score=382, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 44705; Mature: 44705
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILDWSQLDVAARTDALTRPVQTVAAQTRNAVAALIADVRTRGDAALREITARFDGVSL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH ERFAVSEAEFAAAEAAVAPELRQAMQDAVARIDTFHRAGMSEGYAVETAPGVVCEKIVRP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH IGRVGLYVPAGSAPLPSTALMLGVPARLAGCRAVVLCTPPRKDGSVDPAVLVAAWLTGVR HHHCEEEECCCCCCCCCHHHEECCCHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH RVFKLGGAQAIAAMAYGTESVPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL HHHHHCCHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEE VIADAGAQAAFVAADLLSQAEHGADSQVLLLSDSDVLIDAVQAQLEIQLAHLSRADIARQ EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAQSRLIKVQTLDEAFAISNRYAPEHLILALREPRAWLAQVEAAGSVFLGDYTPEALGD HHHHHHEEEEEEHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCEEECCCCHHHHHH YCSGTNHVLPTSGAARAYSGVSVASFQNMFSVQAASKAGIAGIGECALILARAEGLDAHA HHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC NAVALRMGVAA CCEEEEECCCC >Mature Secondary Structure MKILDWSQLDVAARTDALTRPVQTVAAQTRNAVAALIADVRTRGDAALREITARFDGVSL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH ERFAVSEAEFAAAEAAVAPELRQAMQDAVARIDTFHRAGMSEGYAVETAPGVVCEKIVRP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHH IGRVGLYVPAGSAPLPSTALMLGVPARLAGCRAVVLCTPPRKDGSVDPAVLVAAWLTGVR HHHCEEEECCCCCCCCCHHHEECCCHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH RVFKLGGAQAIAAMAYGTESVPSCDKLFGPGNSYVTEAKQQVAQSGAAAIDMPAGPSEVL HHHHHCCHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCEE VIADAGAQAAFVAADLLSQAEHGADSQVLLLSDSDVLIDAVQAQLEIQLAHLSRADIARQ EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH ALAQSRLIKVQTLDEAFAISNRYAPEHLILALREPRAWLAQVEAAGSVFLGDYTPEALGD HHHHHHEEEEEEHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHCCCEEECCCCHHHHHH YCSGTNHVLPTSGAARAYSGVSVASFQNMFSVQAASKAGIAGIGECALILARAEGLDAHA HHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC NAVALRMGVAA CCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]