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The map label for this gene is yhgF [H]

Identifier: 84623748

GI number: 84623748

Start: 2312434

End: 2314794

Strand: Direct

Name: yhgF [H]

Synonym: XOO_2091

Alternate gene names: 84623748

Gene position: 2312434-2314794 (Clockwise)

Preceding gene: 84623747

Following gene: 84623749

Centisome position: 46.81

GC content: 64.59

Gene sequence:

>2361_bases
ATGCACTATAGCCAGCTTGCCCATCAGATTGCTCGCACCATCGCCGACGAGATCGGTGCTCAGCCCGCCCAGGCGCGCGC
CGCCATTGCCCTGCTGGATGAGGGCGCCAGCGTCCCGTTCATTGCGCGCTACCGCAAGGAAGTCACCGGCGGGCTGGACG
ATACCCAGTTGCGCAATCTGGAAACGCGCCTGACCTACCTGCGCGAGCTGGAAGAACGCCGCGCGGTGATCCTGTCCAGC
ATCGGCGAGCAGGGCAAGCTCAGCGACGAACTTCGCGACGAAATTGTGGCTGCCGATACCAAGTCGCGGCTGGAAGATCT
GTATCTGCCCTACAAGCCCAAGCGCCGCACCCGCGCGCAGATCGCGCGAGAAGCCGGATTGGAGCCATTGGCCGATGGCC
TGTTGTCGGACCCGACGCAGACGCCGGAAGTCGCCGCGGCCGCCTTCATCGATGCCGAAAAGGGCGTTGCCGACAGCAAG
GCCGCGCTGGAAGGCGCGCGCGCAATCCTGATGGAGCGCTGGGGCGAAGACGCCGCACTGCTCGGTGAGCTGCGCAGCTG
GCTGAGCGACAATGGCGTGATCCGCGCGCGCGTGGCCGAGGGCAAGGAAGAGGTCGGTGCCAAGTACCGCGACTACTTCG
ATCACGCCGAATCGCTGGCGAAGATTCCGTCGCACCGCTTGCTGGCGCTGTTTCGCGCGCGACGTGAGGAGTTTCTCTAT
CTGGATCTCGATCCGGGCAGCGATGCCGAGGCTGGGCATCAGTACGCCGAAGGCCGGGTGGCGCGCAGTGCCGGTATTTC
CAATGAAGGCCGCCCGGCCGATCGCTGGTTGCTGGATGCCTGCAGGCTGACCTGGCGCGCCAAGCTGCACATGCATCTGC
TGCTGGACCTGTTCAACCAGGCGCGCGAAAAGGCCGAGGCCGAGGCGATCGCGGTGTTCGGCGACAACCTCAAAGATCTG
ATGCTGGCGGCGCCGGCCGGCCCGCGCGTGGTTCTGGGGCTGGACCCGGGCATCCGTACCGGTTGCAAGATCGCCGTAGT
CGATGCCACCGGCAAGCTCGTGGCCACCGAAACGATTTATCCGCACGAGCCCAAGCGGCAGTGGGATCAGTCGCTGCAGA
CCATCAAAAAGTTGTGCATGCAGCACAACGTGGAGCTGATCGCGATCGGCAACGGGACTGCCAGTCGCGAGACCGACAAG
CTCGCCGGCGAAGCGATTGCGCTGTGCGGCGCTGTCAAGTTGCAGAAGGTTGTGGTCAGCGAGGCTGGCGCGTCGGTGTA
TTCGGCGTCGGAGTTCGCGGCCAAGGAGTTCCCCAATCTGGACGTGTCGCTGCGTGGTGCGGTGTCGATCGCGCGTCGTC
TGCAGGATCCATTGGCCGAGCTGGTGAAGATCGAGCCCAAGGCAATCGGCGTGGGCCAATACCAGCACGATGTCGATCAG
TATCGTCTGGCCAAGGCGCTGGAAGCGCGTGTGGAAGACTGCGTCAACGCGGTCGGTGTGTACGTCAATACCGCCTCGGC
GGCGCTGCTGTCGCGCGTGTCCGGGCTGTCGAGCACGGTGGCGGAAAATATCGTGCGTCACCGCGACGACAACGGCCCGT
TCAAGCGTCGCAAGGACTTGCTCAAGGTGCCGCGATTGGGCGACAAGACCTTCGAACAATGCGCCGGCTTCCTGCGCATT
GCCGATGGCGACGAGCCGCTGGACGTGTCGGCGGTGCATCCGGAAGCCTATCCGGTGGTCGAGCGCATCGTCGGCAGCAC
CGGCAAGCCGATCAAGGCACTGCTGGGCGACGGCAGTTTTCTGCGCGGCCTGAAGCCGGAGATGTTCACCAACGAGCAAT
TCGGTGTGCCAACCGTGCGCGACATTCTCAAAGAGCTGGAAAAACCCGGCCGCGATCCGCGTCCGGAGTTCAAGGCAGCG
CAGTTCGCCGAAGGCATTGAGGACATCAAGCACCTCAAGCCCGGCATGGTGCTCGAAGGGGTGGTCAGCAACGTGGCCGC
GTTCGGCGCGTTCGTCGATATCGGCGTGCACCAGGATGGTTTGGTGCACATCTCGGCGTTGTCGGAGACCTTCGTCAAGG
ATCCGCGCGACGTGGTCAAGGCCGGCGACATCATCAAGGTCAAGGTGCTGGAAGTGGATGTGGCGCGCAAGCGCATCGCG
CTGAGCTGCCGTTTGTCCGATACGCCGGCACCGACCGATGGCTCAGCGCAACCGCGCGAGGCTCGAGGCAACGGTCCGGG
GCAGGGCAGGCGCGACGGTGGTGGGCGCGTTCAGGCGCAAGCCAACAGCAAACCGCGGATCACCGTGCCGCCGGCCGATA
ATGCGCTGGCAGAGGCGTTTGCACGTGCTAAGCGTAGCTAA

Upstream 100 bases:

>100_bases
GCGGCGGAATAGGTTTACGACGGGGTTGTCAACGGGTTTCCGTGGCGGGCCTGCACTGCGAAAATGCTTTTTTCAGTGAA
GCGGTTCACGCCGCGCCGTC

Downstream 100 bases:

>100_bases
GAGCGGCTAACAAAACGTAGCGAGCAGCGGTCAGGTGGGCGCGGACGGCGCGCTCAGAACCGCAGTGGACGCGTGGTACA
TGCCGTTCCGAGCAGTCGCG

Product: transcription-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 786; Mature: 786

Protein sequence:

>786_residues
MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEERRAVILSS
IGEQGKLSDELRDEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLSDPTQTPEVAAAAFIDAEKGVADSK
AALEGARAILMERWGEDAALLGELRSWLSDNGVIRARVAEGKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLY
LDLDPGSDAEAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDK
LAGEAIALCGAVKLQKVVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALEARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSFLRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAA
QFAEGIEDIKHLKPGMVLEGVVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVKAGDIIKVKVLEVDVARKRIA
LSCRLSDTPAPTDGSAQPREARGNGPGQGRRDGGGRVQAQANSKPRITVPPADNALAEAFARAKRS

Sequences:

>Translated_786_residues
MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEERRAVILSS
IGEQGKLSDELRDEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLSDPTQTPEVAAAAFIDAEKGVADSK
AALEGARAILMERWGEDAALLGELRSWLSDNGVIRARVAEGKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLY
LDLDPGSDAEAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDK
LAGEAIALCGAVKLQKVVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALEARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSFLRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAA
QFAEGIEDIKHLKPGMVLEGVVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVKAGDIIKVKVLEVDVARKRIA
LSCRLSDTPAPTDGSAQPREARGNGPGQGRRDGGGRVQAQANSKPRITVPPADNALAEAFARAKRS
>Mature_786_residues
MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEERRAVILSS
IGEQGKLSDELRDEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLSDPTQTPEVAAAAFIDAEKGVADSK
AALEGARAILMERWGEDAALLGELRSWLSDNGVIRARVAEGKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLY
LDLDPGSDAEAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDK
LAGEAIALCGAVKLQKVVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALEARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSFLRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAA
QFAEGIEDIKHLKPGMVLEGVVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVKAGDIIKVKVLEVDVARKRIA
LSCRLSDTPAPTDGSAQPREARGNGPGQGRRDGGGRVQAQANSKPRITVPPADNALAEAFARAKRS

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=803, Percent_Identity=32.1295143212951, Blast_Score=350, Evalue=2e-96,
Organism=Homo sapiens, GI27597090, Length=245, Percent_Identity=28.9795918367347, Blast_Score=75, Evalue=3e-13,
Organism=Escherichia coli, GI87082262, Length=748, Percent_Identity=63.6363636363636, Blast_Score=925, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=126, Percent_Identity=32.5396825396825, Blast_Score=66, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17511129, Length=725, Percent_Identity=27.5862068965517, Blast_Score=215, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI17552892, Length=314, Percent_Identity=27.0700636942675, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321552, Length=186, Percent_Identity=27.9569892473118, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI62484314, Length=790, Percent_Identity=32.2784810126582, Blast_Score=369, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85470; Mature: 85470

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCHHHHHHH
ETRLTYLRELEERRAVILSSIGEQGKLSDELRDEIVAADTKSRLEDLYLPYKPKRRTRAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IAREAGLEPLADGLLSDPTQTPEVAAAAFIDAEKGVADSKAALEGARAILMERWGEDAAL
HHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH
LGELRSWLSDNGVIRARVAEGKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLY
HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE
LDLDPGSDAEAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQ
EECCCCCCCHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREKAEAEAIAVFGDNLKDLMLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIY
HHHHHHHHEEEEECCCHHHHHEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEECCCC
PHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDKLAGEAIALCGAVKLQKVVVS
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
HCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
YRLAKALEARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LKVPRLGDKTFEQCAGFLRIADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSF
HHCCCCCCHHHHHHHCEEEECCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHCCCHH
LRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAAQFAEGIEDIKHLKPGMVLEG
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
VVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVKAGDIIKVKVLEVDVARKRIA
HHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCHHHHHCCCEEEEEEEEEHHHHHHEE
LSCRLSDTPAPTDGSAQPREARGNGPGQGRRDGGGRVQAQANSKPRITVPPADNALAEAF
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHH
ARAKRS
HHHCCC
>Mature Secondary Structure
MHYSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHCCCCHHHHHHH
ETRLTYLRELEERRAVILSSIGEQGKLSDELRDEIVAADTKSRLEDLYLPYKPKRRTRAQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IAREAGLEPLADGLLSDPTQTPEVAAAAFIDAEKGVADSKAALEGARAILMERWGEDAAL
HHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHH
LGELRSWLSDNGVIRARVAEGKEEVGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLY
HHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEE
LDLDPGSDAEAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQ
EECCCCCCCHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AREKAEAEAIAVFGDNLKDLMLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIY
HHHHHHHHEEEEECCCHHHHHEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEECCCC
PHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDKLAGEAIALCGAVKLQKVVVS
CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
HCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
YRLAKALEARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LKVPRLGDKTFEQCAGFLRIADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSF
HHCCCCCCHHHHHHHCEEEECCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHCCCHH
LRGLKPEMFTNEQFGVPTVRDILKELEKPGRDPRPEFKAAQFAEGIEDIKHLKPGMVLEG
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
VVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVKAGDIIKVKVLEVDVARKRIA
HHHHHHHHHHHHEECCCCCCCEEHHHHHHHHHCCCHHHHHCCCEEEEEEEEEHHHHHHEE
LSCRLSDTPAPTDGSAQPREARGNGPGQGRRDGGGRVQAQANSKPRITVPPADNALAEAF
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHHHHH
ARAKRS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]