| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623744
Identifier: 84623744
GI number: 84623744
Start: 2310066
End: 2310263
Strand: Direct
Name: 84623744
Synonym: XOO_2087
Alternate gene names: NA
Gene position: 2310066-2310263 (Clockwise)
Preceding gene: 84623743
Following gene: 84623745
Centisome position: 46.76
GC content: 59.6
Gene sequence:
>198_bases ATGTCCACCACCACACTATCCCGCTCCCGCAATGACCGCATGATCGCCGGTGTCGTTGGCGGCATCGCGCATCGTTTCGG GTGGAGCTCCACGTTGCTACGCGTGTTGTTCGTCATCGTGTCCATTGCCTCGGCTGCGTTTCCCGGCATCCTGGTCTATC TGATCCTGTGGCTGCTGATTCCCAACCAGGCCGATTGA
Upstream 100 bases:
>100_bases GCACGCGCAGGTGGCGCTCTGCTGAGCAGGCAGTGCAGCCGTCACGGTATGCTGCTGTTGCGCTTTCTAGACTGTTGGCT ACGTTTGCAAGAGTCCTGCC
Downstream 100 bases:
>100_bases ATCCAGCTGAGCGCTGGCGATCAGCATTGCAGGCGCTGGGCGCGTGATGGACGCTGCCCAATAGCGTGCTCGGGCTGGCG ATCGGCGCAGCCAGGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Shock Protein C PspC; Stress-Responsive Transcription Regulator; Stress-Responsive Transcriptional Regulator PspC; Conserved Domain Protein; Phage Shock Protein C Pspc; Phage Shock Protein C; PspC Domain-Containing Protein
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSTTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGILVYLILWLLIPNQAD
Sequences:
>Translated_65_residues MSTTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGILVYLILWLLIPNQAD >Mature_64_residues STTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGILVYLILWLLIPNQAD
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7088; Mature: 6956
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGILVYLILWLLI CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNQAD CCCCC >Mature Secondary Structure STTTLSRSRNDRMIAGVVGGIAHRFGWSSTLLRVLFVIVSIASAAFPGILVYLILWLLI CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PNQAD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA