| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623738
Identifier: 84623738
GI number: 84623738
Start: 2304634
End: 2305143
Strand: Direct
Name: 84623738
Synonym: XOO_2081
Alternate gene names: NA
Gene position: 2304634-2305143 (Clockwise)
Preceding gene: 84623737
Following gene: 84623739
Centisome position: 46.65
GC content: 64.51
Gene sequence:
>510_bases ATGGCCCAAGCATTGAGCAAACTCGAACGCATTCCCAAACTGAGCCGCTTTGGCTGGCTGATGGGCTTGTACGCAGAAAA CTTCCAGCATCTGACCCGGCTGTTCGCTCCTGCCGATTTGGCCCCCGGTTCCTATGTATCGTCGATCGGCGACGGCCTGA ACTTGCGGCTGGACGTGATCGAATGCCACCGCTACACGGTGGAACTGCGCTTGACTTACGACCTCTGCGACCCGGTCACC GGCGAGCCGGACCCGTCGGCGTATGTGCGCCTGTATCGCGACGCGCGCCAGGCGGAGACCACGCATTGCTATGTCGGCCG TCGCTGGCAGGACGTCATGGGCATGTTCCCGCCGCCGGCCGAGCTGATCAGCCACCGCATGCGCATGAATACGTTCCTGG GCAAGTGGCTGGAGTACCTCGCCGAGCGTGGTCACGGCGTTGCGACGCTGCACCTGGATGCCGATGACCTGGCGCCTCCG CGGCCGAACGCGCAGGCCGCCGTCGGCTGA
Upstream 100 bases:
>100_bases GGGATACGAAGCGCGCGGGGCAGCGCTCCGCCAAGGTAGGCCTGCGGTGGGGCCCTCGTCAATGCTGCCCGTGCGGCGGC GCAGCGTGTAGGATCGGCCC
Downstream 100 bases:
>100_bases GCCGGCGTTGCCGCGGCGTCCGCCGCACCGCTTTGGTCATACCGCTTCAGTCATACTGGTACGCTTCGTGTCAGATTGCG TGCCATGCCCTATACCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLNLRLDVIECHRYTVELRLTYDLCDPVT GEPDPSAYVRLYRDARQAETTHCYVGRRWQDVMGMFPPPAELISHRMRMNTFLGKWLEYLAERGHGVATLHLDADDLAPP RPNAQAAVG
Sequences:
>Translated_169_residues MAQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLNLRLDVIECHRYTVELRLTYDLCDPVT GEPDPSAYVRLYRDARQAETTHCYVGRRWQDVMGMFPPPAELISHRMRMNTFLGKWLEYLAERGHGVATLHLDADDLAPP RPNAQAAVG >Mature_168_residues AQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLNLRLDVIECHRYTVELRLTYDLCDPVTG EPDPSAYVRLYRDARQAETTHCYVGRRWQDVMGMFPPPAELISHRMRMNTFLGKWLEYLAERGHGVATLHLDADDLAPPR PNAQAAVG
Specific function: Unknown
COG id: COG3151
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19101; Mature: 18970
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLNLRLDVI CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE ECHRYTVELRLTYDLCDPVTGEPDPSAYVRLYRDARQAETTHCYVGRRWQDVMGMFPPPA EECEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCCHH ELISHRMRMNTFLGKWLEYLAERGHGVATLHLDADDLAPPRPNAQAAVG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCC >Mature Secondary Structure AQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLNLRLDVI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE ECHRYTVELRLTYDLCDPVTGEPDPSAYVRLYRDARQAETTHCYVGRRWQDVMGMFPPPA EECEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCCHH ELISHRMRMNTFLGKWLEYLAERGHGVATLHLDADDLAPPRPNAQAAVG HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA