Click here to switch to the map view.

The map label for this gene is tadA [H]

Identifier: 84623733

GI number: 84623733

Start: 2298704

End: 2299216

Strand: Direct

Name: tadA [H]

Synonym: XOO_2076

Alternate gene names: 84623733

Gene position: 2298704-2299216 (Clockwise)

Preceding gene: 84623732

Following gene: 84623734

Centisome position: 46.53

GC content: 68.23

Gene sequence:

>513_bases
GTGAGATTGCCCGCCGAGCCCATCGATGCGCCGCACGCGGCGATCGACGTGCACTGGATGCAGCACGCCCTGCACCTGGC
CGAGTGTGCCGAGCGCGACCATGACGAGATCCCGGTTGGCGCGCTGATCGTCGGTGCCGAGGGCAACGTGCTGGGCGAAG
GTTGGAACTTCAATATCGCCAGCCACGACCCCAGCGCGCATGCCGAAATCGTGGCGATGCGCGACGCCGGGCGCCGCCTG
TCCAATCACCGCCTGATCGGCTGCACGCTCTACGTCACCCTGGAGCCGTGCGCGATGTGTGCGATGGCGATGATCCATGC
GCGGATCGCGCGCGTGGTGTTCGCCGCAAGCGACCCCAAGACCGGCGCCTGCGGCAGCGTGTTCGACCTGCTGGCCGACC
CGCGCCACAATCACCGTGTGCGGGTGTGCGGTGGCGTGCTTGCGGCCGAGGCGAGCTTGCGCCTGACCAATTACTTCAGA
GCCAAGCGCGGCAAGCCGCCACTTGCGCCCTGA

Upstream 100 bases:

>100_bases
CCACGGCGCGTCGCGATGCGGAGGGTATCGAGCACCATGTCAGTGAGGCGACGGTTGCTGCGTTCGCCGCGTTCCTGGAC
CGCCAGGGCAGTTCGGCCAC

Downstream 100 bases:

>100_bases
GCGACGCGGCCGCGGTATGATGCGCGCCCTTTTCAGCACCCGGCCGGCGACGGCCTTCCACAGGACGGCGATATGGCAGA
GAACCTTGCAGGCAACGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRLPAEPIDAPHAAIDVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGRRL
SNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPRHNHRVRVCGGVLAAEASLRLTNYFR
AKRGKPPLAP

Sequences:

>Translated_170_residues
MRLPAEPIDAPHAAIDVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGRRL
SNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPRHNHRVRVCGGVLAAEASLRLTNYFR
AKRGKPPLAP
>Mature_170_residues
MRLPAEPIDAPHAAIDVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIASHDPSAHAEIVAMRDAGRRL
SNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPKTGACGSVFDLLADPRHNHRVRVCGGVLAAEASLRLTNYFR
AKRGKPPLAP

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=159, Percent_Identity=31.4465408805031, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI19923945, Length=114, Percent_Identity=40.3508771929825, Blast_Score=67, Evalue=9e-12,
Organism=Escherichia coli, GI145693172, Length=146, Percent_Identity=56.1643835616438, Blast_Score=160, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17541138, Length=161, Percent_Identity=31.6770186335404, Blast_Score=76, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17554608, Length=130, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17555996, Length=126, Percent_Identity=30.1587301587302, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322425, Length=160, Percent_Identity=31.25, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18377; Mature: 18377

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPAEPIDAPHAAIDVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCEEEEEC
SHDPSAHAEIVAMRDAGRRLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPK
CCCCCCCEEEEEECHHCCHHCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHEECCCCC
TGACGSVFDLLADPRHNHRVRVCGGVLAAEASLRLTNYFRAKRGKPPLAP
CCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRLPAEPIDAPHAAIDVHWMQHALHLAECAERDHDEIPVGALIVGAEGNVLGEGWNFNIA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECCCEEEEEC
SHDPSAHAEIVAMRDAGRRLSNHRLIGCTLYVTLEPCAMCAMAMIHARIARVVFAASDPK
CCCCCCCEEEEEECHHCCHHCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHEECCCCC
TGACGSVFDLLADPRHNHRVRVCGGVLAAEASLRLTNYFRAKRGKPPLAP
CCCCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]