| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is guaB [H]
Identifier: 84623719
GI number: 84623719
Start: 2281185
End: 2282642
Strand: Direct
Name: guaB [H]
Synonym: XOO_2062
Alternate gene names: 84623719
Gene position: 2281185-2282642 (Clockwise)
Preceding gene: 84623718
Following gene: 84623720
Centisome position: 46.18
GC content: 63.51
Gene sequence:
>1458_bases ATGCTACGCATCCAGGCTGAAGCTCTTACCTACGACGACGTTTCGCTCGTCCCCGCTCATTCGATCGTCCTGCCCAAGGA CGTCAGCCTGGAAACCCGGCTGACGCGCGACCTGCGCCTGAAACTGCCGATTCTGTCGGCGGCAATGGACACAGTGACCG AACACCGTCTTGCGGTGGCCATGGCCCAGCTGGGCGGCATCGGCATCATCCACAAGAATCTGACCCCGCAGCAGCAATCC GGCGAAGTGGCGCGGGTCAAGAAGTTCGAATCCGGTGTGATCACCGAGCCGTTCACCGTCCGCCCGGACACGACCATCGG TGAAGTGCTGGCACTGACGCGCGCGCGCAACATCTCCGGCGTGCCGGTGGTCGACGGCAGTGAACTGGTCGGTATCGTCA CCAGCCGCGACATGCGCTTCGAAAAGAAGCTCGACGATCCGGTCCGCCACATCATGACCAAGAAGGATCGCCTGATCACC GTGCGCGAAGGCGCCAGCGATGAGGAAGTGCTCGAGCTGCTGCATCGCAATCGCATCGAAAAGGTCTTGGTGGTCAACCA CAGCTTCGAGCTGCGCGGCCTGATCACGGTCAAGGACATCCAGAAGAAGACCGACAACCCGAATGCCGCCAAGGACAGCG CCAAGCGCTTGCTGGTGGGCGCGGCGGTGGGTGTGGGCGGCGATACCGAACAGCGTATCGAACTGCTTGCCGCAGCTGGC GTGGACGTGGTTATCGTCGATACTGCGCATGGTCATTCGCAGGGCGTGATCGATCGCGTGGCGTGGGTCAAGAAGACTTA TCCGCAGCTGCAGGTGATCGGCGGCAACATCGTCACCGGCGATGCCGCGCTGGCGTTGATGGACGCCGGTGCCGACGCAG TCAAGGTTGGCGTGGGTCCTGGTTCGATCTGCACCACGCGTGTGGTTGCTGGCGTGGGCGTGCCGCAGATCACGGCGGTG GACATGGTGGCCGAAGCGCTGCAGGACCGCATTCCGTTGATTGCCGATGGCGGCATCCGCTATTCCGGCGACATCGGCAA GGCGTTGGTGGCCGGTGCGTCCACGGTGATGGTCGGTGGCCTGTTGGCCGGTACCGAAGAAGCACCGGGCGAAGTCGAAC TGTTCCAGGGCCGTAGCTACAAGAGCTACCGCGGCATGGGCAGCCTGGGTGCGATGGAGAAGGGGTCCAAGGACCGCTAT TTCCAGGACGCCTCCGATGCCGACAAGCTGGTTCCCGAAGGCATCGAGGGGCGCGTGCCGTATCGCGGCCCGGTCGGCGG CATCATCCATCAGCTCATCGGCGGCTTGCGCGCGACCATGGGGTATGTGGGCTGCGCCACCATCGAAGACATGCGCAGCA AGCCCAAGTTCGTCAAGATCACGGGCGCCGGCCAGCGCGAAAGCCACGTGCACGACGTGCAGATCACCAAAGAGCCACCG AACTATCGCGCCGGGTAA
Upstream 100 bases:
>100_bases GACGGTGCAAGGCGGCGCTGTTGCGACTCCCCAATCCCGACTCCCCAATCCCCGTCCCAATGCGTTAAAATGCCGCGCTT CCCCAAACTCGGGTCCGCCG
Downstream 100 bases:
>100_bases ACCAGCGCGCGGGAGTGGGGATTCGGCATTCGGGATTCGCAAGAGCCTACCGCGTCCTCATCCGGCAACGGTTGTGGCGT GTGTTCTTGCGAATCTCCAA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQS GEVARVKKFESGVITEPFTVRPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNHSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEDMRSKPKFVKITGAGQRESHVHDVQITKEPP NYRAG
Sequences:
>Translated_485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQS GEVARVKKFESGVITEPFTVRPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNHSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEDMRSKPKFVKITGAGQRESHVHDVQITKEPP NYRAG >Mature_485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPQQQS GEVARVKKFESGVITEPFTVRPDTTIGEVLALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKVLVVNHSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATIEDMRSKPKFVKITGAGQRESHVHDVQITKEPP NYRAG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=485, Percent_Identity=44.1237113402062, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI156616279, Length=485, Percent_Identity=44.1237113402062, Blast_Score=359, Evalue=3e-99, Organism=Homo sapiens, GI34328928, Length=485, Percent_Identity=44.1237113402062, Blast_Score=359, Evalue=3e-99, Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=43.064182194617, Blast_Score=359, Evalue=4e-99, Organism=Homo sapiens, GI34328930, Length=485, Percent_Identity=44.1237113402062, Blast_Score=358, Evalue=4e-99, Organism=Homo sapiens, GI217035152, Length=474, Percent_Identity=44.0928270042194, Blast_Score=349, Evalue=3e-96, Organism=Homo sapiens, GI217035148, Length=485, Percent_Identity=43.5051546391753, Blast_Score=348, Evalue=5e-96, Organism=Homo sapiens, GI217035150, Length=485, Percent_Identity=41.2371134020619, Blast_Score=316, Evalue=3e-86, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=38.6178861788618, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI156104880, Length=261, Percent_Identity=36.3984674329502, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=62.6283367556468, Blast_Score=566, Evalue=1e-163, Organism=Escherichia coli, GI1786293, Length=267, Percent_Identity=34.0823970037453, Blast_Score=149, Evalue=4e-37, Organism=Caenorhabditis elegans, GI71994385, Length=499, Percent_Identity=39.2785571142285, Blast_Score=304, Evalue=6e-83, Organism=Caenorhabditis elegans, GI71994389, Length=421, Percent_Identity=41.3301662707838, Blast_Score=285, Evalue=4e-77, Organism=Caenorhabditis elegans, GI17560440, Length=255, Percent_Identity=33.3333333333333, Blast_Score=157, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=39.7515527950311, Blast_Score=332, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6323585, Length=487, Percent_Identity=39.4250513347023, Blast_Score=329, Evalue=5e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=39.7515527950311, Blast_Score=317, Evalue=2e-87, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=39.6449704142012, Blast_Score=241, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=141, Percent_Identity=38.2978723404255, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641071, Length=481, Percent_Identity=41.7879417879418, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI24641073, Length=481, Percent_Identity=41.7879417879418, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=42.5968109339408, Blast_Score=313, Evalue=1e-85,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51766; Mature: 51766
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCEEECCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPQQQSGEVARVKKFESGVITEPFTVRPDTTIGEVLALTRARNISG HHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KVLVVNHSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEEECCEEEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATIEDMRSKPKFVKITGAGQRESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC NYRAG CCCCC >Mature Secondary Structure MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCEEECCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPQQQSGEVARVKKFESGVITEPFTVRPDTTIGEVLALTRARNISG HHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KVLVVNHSFELRGLITVKDIQKKTDNPNAAKDSAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEEECCEEEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPQLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATIEDMRSKPKFVKITGAGQRESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC NYRAG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA