| Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
|---|---|
| Accession | NC_007705 |
| Length | 4,940,217 |
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The map label for this gene is 84623693
Identifier: 84623693
GI number: 84623693
Start: 2251324
End: 2254065
Strand: Direct
Name: 84623693
Synonym: XOO_2036
Alternate gene names: NA
Gene position: 2251324-2254065 (Clockwise)
Preceding gene: 84623692
Following gene: 84623694
Centisome position: 45.57
GC content: 61.56
Gene sequence:
>2742_bases ATGCGCCACCACCACCCCCATTCCGCCGGTCCGGCGCGCAAGCTACTGAGCTGTGCGCTGGACGTTACCGTGCAGGTCGG CCAGACGGCGACCTTGAACCTGGGCGTCGGTGGCGAGCCGGCCACGGCCGCGGGTGGTAACCCCACCACGCTGGACGCGG TGCAGGTGAAGGCGCCGCCGGTGTTGGTCGAAACGCGCACCTCCGAGAACGTCACCTACATTTCCAACGTGCAGATCCAG AACCTGCCGCGTGCCACGCGCAACTTCCTGGAACTGGCCGACACCATGCCGAACGTGCAGTTCACCCGCGAGGCCAACGG CACCACCAAGGTACGCACCGGCGCCACCTCGGCCGAAGGCACCAACGTCTACATCGACGGCGTGAGCCAGAAGAACTACG TGCTGACCGGCGGCGTCAGCGGCCAGGATTCCAGCCGCGGCAACCCGTTCCCGCAGTCGGCGATTGGCGAATACAAGGTC ATCACCTCCAACTACAAAGCCGAGTTCGACCAGGTCAGCGGTGCGGCCATCGTGGCGTCGTCCAAGTCCGGCACCAACGA CTTCCACGGCAGCTTCTTCTGGGACACCAGCAACGACAGCTGGCGCGAAGAGAGCCCGCTGGAGAAGAAGGCCGGTGTGC GCGACGACTTCGAAGAAACCCAGTACGGTGCCACCTTCAGCGGCCCGATCCTCAAGGACAAGGCGCACTTCTTCATCGCT TATGAAGCCAAGGAATACACCACCCCGAACGTGGTGATCCCCGGCTCGATCTATTCGGACCGCGTCGACCAACTGCCGGT GCAGCTGCAGCCGCTGGTGGTGACCTCCAGCACGCCGTTCAAGGAAGACCTGTACTTCGGCAAGATCGACTGGACCATCG GCCAGAACAACCTGTTCGAGCTGACCGGCAAGTACCGCAAGGAAGACGAGCTCAACGATGTCGGCCAAACCTCGACCTAC GAGCACGGCAGCATCAACGGCCAGGAAGAAAAGCGCGCCAACCTGCGTTGGCAGTACAGCGGGGCCAACGTCCTCAACGA AGCCAACCTGAGCTACGAAAGCGCGTTCTGGAACCAGGCACCGATCAACAACGGCAATGGCTACATCCTCAGCTACGCAC CGGTGCGCGGCAACGAGACCGATATCCTGGCGGCGGGTGCCGGCAGCAGCTTCCAGCGCAAGGGCCAGAAGGGCTGGACC TTCCAGGACGACCTGACCTTGAACAGCCTAGAATGGCATGGCGCGCATACCGTCAAGATGGGCGTGAAGTTCAACAGCAT CGATCTGGATTCGACCCAATTCAATCCGGCCAATCCGCAGTACTACTACAACATCCTCACCGACGTCGAAACACCGTATC GCGTGCGCTTCGGTGCGCCGCTGGTGGAAGGTGGCGGCTCGGTGGTGTCCAAGAACAAGCAGTACGGCATCTACCTGCAG GACGACTGGGAGGTCAACGAGCACTGGACCTTGAACCTGGGCGTGCGCTACGACTACGAGCAAACCCCGGCGTTCCTGGA TTTCGTGACCCCCTCGGATGTCGCCAGCGCGCTGCAGAACTGGCCGAACCTGCGCAACGCCAACTACACCATCAACGACT TCATCAGTAGCGGCAATAACCGCCAGGCATTCAAGAATGCCTGGCAGCCGCGTCTGGGCGCCTCGTACGACCTGTTCGGC GATCAGGCGCACGTGATCTATGGTGGCGCCGGCCGTGCGTACGACCGCAACATCTTCGATTACCTGGCACTGGAGCAGCT CAACAACTCGTTCAAGTCGTATAGCTACTACGTCACCAGCGCCAACAACGGCGCCTGCCTCGGCGACCCATGCACCGCCT GGAATCCGGCGTACAACAACCAGGAAGGCTTGAACACGCTCACGGACAACAGCACCGGCGGTGGCGGACGTGAGGTGTAT CTGATCGACAACAACCTCAAGACCCCGTATTCGGACCAATTCAGCATCGGCATGCGCAACATGGTGCCGTTGTGGGGCCA GGACTGGTTTACCGATGCGACCCTGAGCCGCATCGAGAGCCATGACGGTTTTGCGTTCGTGCGTGGTAACCGCCTGCCGG ATGGGGCGTTCTTCCAGCCGGGCACCATCTCCGAGGCACCGACCGACGGCCCGAACGGCTATAGCGCCATCGTGCTGGGC ACCAACGGTGTAGAGACCGGCAACACCCAGCTCGCGTTGCAGGTGGAAAAGCCCTTCGACGAAGCATCCGGCTGGGGTCT GACCGTGGCCTACACCTATTCCGATGCGAAGGAAAACCGCCAGTTCGGCGAGCACTACGCACTGGACCGCGAACGCATCC AGGACTACGGCTGGCGTGAGGCTGGCGGCATTCCGAACAATCGCCTGGTGGTCACCGGCATCTACGAGCTGCCGTATGAG ATCACCTTGTCCGGCAAGCTGTCGCTGGCCAGCCAGACCGCGCGCTACGGCCAGAATTGCCTTGCCGGCAACGACCAGTG CGAGATCATCCAGTTCAAGCCGGATGGCACGCTGGGCGACAAGGAATTCAGTATTGCCGCGAATAAGGAATGGGACACCG GCGGCGCTGTCAAATTCAATGTGCGTGCGGATATCCTCAACGTGTTCAACTGGGTGAATTACGCCACCTTCAATGGCGAT ACCGGAACATTGCAGGACTTGAACACGGCTTACGGTACTCCGACCGGTGTGCTGGCGTCGCCGATGCGCACCTTCCGTTT GGCCTTCGGCCTGAACTGGTGA
Upstream 100 bases:
>100_bases GGCTGCCGACCCTTTCGCGGACGTTCTGTCCGCTCCCGCTGCCCCCCAGTGGCTGGCACTGCCATAACAACAATCTGTAC CGATCCCTGGAGGGACGACC
Downstream 100 bases:
>100_bases TGTGCTCGACCGCCCTGGCTGCATGTCAGGGCGGTCGAACTCGGTGCCTGGATAGGGTAGGTTTGCGTGCGAGATGTAAT CGATTACACGAGTGGGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Oar Protein; CnaB Domain-Containing Protein; NB-Dependent Outer Membrane Receptor; OmpA-Related Protein; Cna B-Type Protein; Nb-Dependent Receptor Plug; Transporter Outer Membrane Receptor Family; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Outer Membrane Receptor Oar-Like Protein; Oar Family Adhesion Protein; NB Outer Membrane Protein Oar Family; OmpA Family Protein; Transporter OMR Family; Outer Membrane Protein With A nB Box; Outer Membrane Receptor Family Protein; NB Dependent Receptor Protein; Nb-Dependent Receptor; OmpA Family Oar-Like Outer Membrane Protein Protein; Nb-Dependent Outer Membrane Receptor; Cna Protein B-Type Domain Protein; Ompa-Related Protein; Oar-Like Outer Membrane Protein OmpA Family Protein; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 913; Mature: 913
Protein sequence:
>913_residues MRHHHPHSAGPARKLLSCALDVTVQVGQTATLNLGVGGEPATAAGGNPTTLDAVQVKAPPVLVETRTSENVTYISNVQIQ NLPRATRNFLELADTMPNVQFTREANGTTKVRTGATSAEGTNVYIDGVSQKNYVLTGGVSGQDSSRGNPFPQSAIGEYKV ITSNYKAEFDQVSGAAIVASSKSGTNDFHGSFFWDTSNDSWREESPLEKKAGVRDDFEETQYGATFSGPILKDKAHFFIA YEAKEYTTPNVVIPGSIYSDRVDQLPVQLQPLVVTSSTPFKEDLYFGKIDWTIGQNNLFELTGKYRKEDELNDVGQTSTY EHGSINGQEEKRANLRWQYSGANVLNEANLSYESAFWNQAPINNGNGYILSYAPVRGNETDILAAGAGSSFQRKGQKGWT FQDDLTLNSLEWHGAHTVKMGVKFNSIDLDSTQFNPANPQYYYNILTDVETPYRVRFGAPLVEGGGSVVSKNKQYGIYLQ DDWEVNEHWTLNLGVRYDYEQTPAFLDFVTPSDVASALQNWPNLRNANYTINDFISSGNNRQAFKNAWQPRLGASYDLFG DQAHVIYGGAGRAYDRNIFDYLALEQLNNSFKSYSYYVTSANNGACLGDPCTAWNPAYNNQEGLNTLTDNSTGGGGREVY LIDNNLKTPYSDQFSIGMRNMVPLWGQDWFTDATLSRIESHDGFAFVRGNRLPDGAFFQPGTISEAPTDGPNGYSAIVLG TNGVETGNTQLALQVEKPFDEASGWGLTVAYTYSDAKENRQFGEHYALDRERIQDYGWREAGGIPNNRLVVTGIYELPYE ITLSGKLSLASQTARYGQNCLAGNDQCEIIQFKPDGTLGDKEFSIAANKEWDTGGAVKFNVRADILNVFNWVNYATFNGD TGTLQDLNTAYGTPTGVLASPMRTFRLAFGLNW
Sequences:
>Translated_913_residues MRHHHPHSAGPARKLLSCALDVTVQVGQTATLNLGVGGEPATAAGGNPTTLDAVQVKAPPVLVETRTSENVTYISNVQIQ NLPRATRNFLELADTMPNVQFTREANGTTKVRTGATSAEGTNVYIDGVSQKNYVLTGGVSGQDSSRGNPFPQSAIGEYKV ITSNYKAEFDQVSGAAIVASSKSGTNDFHGSFFWDTSNDSWREESPLEKKAGVRDDFEETQYGATFSGPILKDKAHFFIA YEAKEYTTPNVVIPGSIYSDRVDQLPVQLQPLVVTSSTPFKEDLYFGKIDWTIGQNNLFELTGKYRKEDELNDVGQTSTY EHGSINGQEEKRANLRWQYSGANVLNEANLSYESAFWNQAPINNGNGYILSYAPVRGNETDILAAGAGSSFQRKGQKGWT FQDDLTLNSLEWHGAHTVKMGVKFNSIDLDSTQFNPANPQYYYNILTDVETPYRVRFGAPLVEGGGSVVSKNKQYGIYLQ DDWEVNEHWTLNLGVRYDYEQTPAFLDFVTPSDVASALQNWPNLRNANYTINDFISSGNNRQAFKNAWQPRLGASYDLFG DQAHVIYGGAGRAYDRNIFDYLALEQLNNSFKSYSYYVTSANNGACLGDPCTAWNPAYNNQEGLNTLTDNSTGGGGREVY LIDNNLKTPYSDQFSIGMRNMVPLWGQDWFTDATLSRIESHDGFAFVRGNRLPDGAFFQPGTISEAPTDGPNGYSAIVLG TNGVETGNTQLALQVEKPFDEASGWGLTVAYTYSDAKENRQFGEHYALDRERIQDYGWREAGGIPNNRLVVTGIYELPYE ITLSGKLSLASQTARYGQNCLAGNDQCEIIQFKPDGTLGDKEFSIAANKEWDTGGAVKFNVRADILNVFNWVNYATFNGD TGTLQDLNTAYGTPTGVLASPMRTFRLAFGLNW >Mature_913_residues MRHHHPHSAGPARKLLSCALDVTVQVGQTATLNLGVGGEPATAAGGNPTTLDAVQVKAPPVLVETRTSENVTYISNVQIQ NLPRATRNFLELADTMPNVQFTREANGTTKVRTGATSAEGTNVYIDGVSQKNYVLTGGVSGQDSSRGNPFPQSAIGEYKV ITSNYKAEFDQVSGAAIVASSKSGTNDFHGSFFWDTSNDSWREESPLEKKAGVRDDFEETQYGATFSGPILKDKAHFFIA YEAKEYTTPNVVIPGSIYSDRVDQLPVQLQPLVVTSSTPFKEDLYFGKIDWTIGQNNLFELTGKYRKEDELNDVGQTSTY EHGSINGQEEKRANLRWQYSGANVLNEANLSYESAFWNQAPINNGNGYILSYAPVRGNETDILAAGAGSSFQRKGQKGWT FQDDLTLNSLEWHGAHTVKMGVKFNSIDLDSTQFNPANPQYYYNILTDVETPYRVRFGAPLVEGGGSVVSKNKQYGIYLQ DDWEVNEHWTLNLGVRYDYEQTPAFLDFVTPSDVASALQNWPNLRNANYTINDFISSGNNRQAFKNAWQPRLGASYDLFG DQAHVIYGGAGRAYDRNIFDYLALEQLNNSFKSYSYYVTSANNGACLGDPCTAWNPAYNNQEGLNTLTDNSTGGGGREVY LIDNNLKTPYSDQFSIGMRNMVPLWGQDWFTDATLSRIESHDGFAFVRGNRLPDGAFFQPGTISEAPTDGPNGYSAIVLG TNGVETGNTQLALQVEKPFDEASGWGLTVAYTYSDAKENRQFGEHYALDRERIQDYGWREAGGIPNNRLVVTGIYELPYE ITLSGKLSLASQTARYGQNCLAGNDQCEIIQFKPDGTLGDKEFSIAANKEWDTGGAVKFNVRADILNVFNWVNYATFNGD TGTLQDLNTAYGTPTGVLASPMRTFRLAFGLNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100666; Mature: 100666
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHHHPHSAGPARKLLSCALDVTVQVGQTATLNLGVGGEPATAAGGNPTTLDAVQVKAPP CCCCCCCCCCHHHHHHHHHEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCC VLVETRTSENVTYISNVQIQNLPRATRNFLELADTMPNVQFTREANGTTKVRTGATSAEG EEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCC TNVYIDGVSQKNYVLTGGVSGQDSSRGNPFPQSAIGEYKVITSNYKAEFDQVSGAAIVAS CEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCHHHCCCEEEEEE SKSGTNDFHGSFFWDTSNDSWREESPLEKKAGVRDDFEETQYGATFSGPILKDKAHFFIA CCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHCCCEECCCEEECCCEEEEE YEAKEYTTPNVVIPGSIYSDRVDQLPVQLQPLVVTSSTPFKEDLYFGKIDWTIGQNNLFE EECCCCCCCCEEECCCHHHCHHHCCCCEEEEEEEECCCCCHHCEEEEEEEEEECCCCEEE LTGKYRKEDELNDVGQTSTYEHGSINGQEEKRANLRWQYSGANVLNEANLSYESAFWNQA ECCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCEEECCCCCHHHHCCCCC PINNGNGYILSYAPVRGNETDILAAGAGSSFQRKGQKGWTFQDDLTLNSLEWHGAHTVKM CCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCEEECCCEEECEEECCCEEEEE GVKFNSIDLDSTQFNPANPQYYYNILTDVETPYRVRFGAPLVEGGGSVVSKNKQYGIYLQ EEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEECCCCEEECCCEEEEEEC DDWEVNEHWTLNLGVRYDYEQTPAFLDFVTPSDVASALQNWPNLRNANYTINDFISSGNN CCCCCCCEEEEEEEEEECCCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEHHHHHCCCCC RQAFKNAWQPRLGASYDLFGDQAHVIYGGAGRAYDRNIFDYLALEQLNNSFKSYSYYVTS CHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE ANNGACLGDPCTAWNPAYNNQEGLNTLTDNSTGGGGREVYLIDNNLKTPYSDQFSIGMRN CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCC MVPLWGQDWFTDATLSRIESHDGFAFVRGNRLPDGAFFQPGTISEAPTDGPNGYSAIVLG CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC TNGVETGNTQLALQVEKPFDEASGWGLTVAYTYSDAKENRQFGEHYALDRERIQDYGWRE CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCHH AGGIPNNRLVVTGIYELPYEITLSGKLSLASQTARYGQNCLAGNDQCEIIQFKPDGTLGD CCCCCCCCEEEEEEEECCEEEEECCEEEHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCC KEFSIAANKEWDTGGAVKFNVRADILNVFNWVNYATFNGDTGTLQDLNTAYGTPTGVLAS CEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHEEEEECCCCCCHHHCHHHCCCCCCHHHC PMRTFRLAFGLNW CHHHEEEEEECCC >Mature Secondary Structure MRHHHPHSAGPARKLLSCALDVTVQVGQTATLNLGVGGEPATAAGGNPTTLDAVQVKAPP CCCCCCCCCCHHHHHHHHHEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCC VLVETRTSENVTYISNVQIQNLPRATRNFLELADTMPNVQFTREANGTTKVRTGATSAEG EEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCC TNVYIDGVSQKNYVLTGGVSGQDSSRGNPFPQSAIGEYKVITSNYKAEFDQVSGAAIVAS CEEEEECCCCCCEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCHHHCCCEEEEEE SKSGTNDFHGSFFWDTSNDSWREESPLEKKAGVRDDFEETQYGATFSGPILKDKAHFFIA CCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHCCCEECCCEEECCCEEEEE YEAKEYTTPNVVIPGSIYSDRVDQLPVQLQPLVVTSSTPFKEDLYFGKIDWTIGQNNLFE EECCCCCCCCEEECCCHHHCHHHCCCCEEEEEEEECCCCCHHCEEEEEEEEEECCCCEEE LTGKYRKEDELNDVGQTSTYEHGSINGQEEKRANLRWQYSGANVLNEANLSYESAFWNQA ECCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCEEECCCCCHHHHCCCCC PINNGNGYILSYAPVRGNETDILAAGAGSSFQRKGQKGWTFQDDLTLNSLEWHGAHTVKM CCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHCCCCCCEEECCCEEECEEECCCEEEEE GVKFNSIDLDSTQFNPANPQYYYNILTDVETPYRVRFGAPLVEGGGSVVSKNKQYGIYLQ EEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEECCCCEEECCCEEEEEEC DDWEVNEHWTLNLGVRYDYEQTPAFLDFVTPSDVASALQNWPNLRNANYTINDFISSGNN CCCCCCCEEEEEEEEEECCCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEHHHHHCCCCC RQAFKNAWQPRLGASYDLFGDQAHVIYGGAGRAYDRNIFDYLALEQLNNSFKSYSYYVTS CHHHHHCCCCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEE ANNGACLGDPCTAWNPAYNNQEGLNTLTDNSTGGGGREVYLIDNNLKTPYSDQFSIGMRN CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCC MVPLWGQDWFTDATLSRIESHDGFAFVRGNRLPDGAFFQPGTISEAPTDGPNGYSAIVLG CCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC TNGVETGNTQLALQVEKPFDEASGWGLTVAYTYSDAKENRQFGEHYALDRERIQDYGWRE CCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCHH AGGIPNNRLVVTGIYELPYEITLSGKLSLASQTARYGQNCLAGNDQCEIIQFKPDGTLGD CCCCCCCCEEEEEEEECCEEEEECCEEEHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCC KEFSIAANKEWDTGGAVKFNVRADILNVFNWVNYATFNGDTGTLQDLNTAYGTPTGVLAS CEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHEEEEECCCCCCHHHCHHHCCCCCCHHHC PMRTFRLAFGLNW CHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA